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Os07g0671000

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 10 (0.0602) R2 : 0.729
β1 : 3.73 (0.308) R2dD : 0.303 R2D : 0.191
β2 : 1.88 (0.118) R2dC : 0.153 R2C : 0.132
β3 : -1.3 (0.406) R2dE : 0.0231 R2E : -0.162
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -9.88 (0.791) R2dD*E : 0.184 R2D*E : 0.26
γ1 : 1.71 (0.112) R2dN8 : 0.243 R2N8 : 0.134
σ : 0.859
deviance : 340.31
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C
peak time of C : 16.2
E
wheather : wind
threshold : 5.003
memory length : 47520
response mode : < th
dose dependency : dose independent
G
type of G : rect.
peak or start time of G : 17.2
open length of G : 0.582

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Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = wind, response mode = < th, dose dependency = dose independent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
340.79 0.867 10 3.74 1.88 -1.3 0.0648 -9.91 1.71 16.2 5.004 47520 17.2 0.585
429.92 0.966 9.7 4.2 1.88 -0.642 -0.36 -- 2.21 16.2 9.5 47520 16.2 0.567
340.31 0.859 10 3.73 1.88 -1.3 -- -9.88 1.71 16.2 5.003 47520 17.2 0.582
411.05 0.944 9.5 4.81 1.93 -1.2 -- -- 2.55 16.3 9.302 47520 16.2 0.917
515.84 1.06 10 4.08 -- -1.89 -- -9.7 1.65 -- 5.176 47147 17.2 0.583
460.2 1.01 9.56 3.81 1.89 -- 0.103 -- 2.18 16.2 -- -- -- --
460.23 1 9.56 3.81 1.89 -- -- -- 2.18 16.2 -- -- -- --
594.1 1.14 9.48 4.73 -- -1.61 -- -- 2.43 -- 9.483 47520 16.2 0.733
623.47 1.16 9.66 -- 1.8 1.11 -- -- 1.77 16.4 6.8 47520 17.3 0.0999
652.89 1.19 9.55 3.73 -- -- -- -- 2.13 -- -- -- -- --
842.68 1.36 9.66 -- 1.81 -- -- -- 1.75 16.3 -- -- -- --
609.42 1.15 9.66 -- -- 3.61 -- -- 1.73 -- 6.5 47520 17.3 0.0833
1020.6 1.49 9.64 -- -- -- -- -- 1.71 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 331.89 atmosphere 1005 43200 > th dose independent rect. 9 2
4 332.89 atmosphere 1005 43200 < th dose independent rect. 8 4
23 335.61 atmosphere 1010 43200 < th dose dependent rect. 7 2
24 335.74 atmosphere 1010 43200 < th dose dependent rect. 7 4
28 335.77 atmosphere 1005 43200 < th dose independent rect. 2 10
57 336.48 atmosphere 1010 43200 < th dose dependent rect. 23 1
91 337.14 atmosphere 1010 43200 < th dose dependent rect. 20 16
147 337.62 wind 9 43200 > th dose independent rect. 16 7
156 337.72 atmosphere 1010 43200 < th dose dependent sin 5 NA
185 337.91 atmosphere 1010 43200 < th dose dependent rect. 6 18
195 337.97 wind 9 43200 > th dose independent rect. 16 3
238 338.22 atmosphere 1005 43200 > th dose independent rect. 22 14
321 338.61 atmosphere 1010 43200 < th dose dependent no NA NA
366 338.80 atmosphere 1010 43200 < th dose dependent rect. 10 23
443 339.17 wind 9 43200 < th dose independent rect. 17 2
604 340.21 atmosphere 1005 43200 < th dose independent sin 6 NA
609 340.26 wind 9 43200 > th dose dependent rect. 16 4
624 340.39 wind 9 43200 < th dose independent rect. 16 7
630 340.43 atmosphere 1005 43200 > th dose independent sin 7 NA
652 340.64 atmosphere 1005 43200 < th dose independent rect. 4 1
722 341.62 atmosphere 1005 43200 < th dose independent rect. 3 3
738 341.96 atmosphere 1005 43200 > th dose independent rect. 4 2
842 343.35 atmosphere 1005 14400 < th dose independent rect. 10 7
849 343.52 atmosphere 1005 14400 < th dose independent rect. 9 10
865 343.71 atmosphere 1005 14400 > th dose independent rect. 9 10
907 344.30 wind 7 43200 > th dose dependent rect. 16 7