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Os07g0669600

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 10.4 (0.0168) R2 : 0.679
β1 : -0.746 (0.0616) R2dD : 0.107 R2D : 0.097
β2 : 1.16 (0.0405) R2dC : 0.582 R2C : 0.57
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.00945 (0.0359) R2dN8 : 6.55e-05 R2N8 : 0.000928
σ : 0.316
deviance : 45.55
__
_____
C
peak time of C : 1.66
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
37.73 0.289 10.4 -0.664 1.21 0.539 0.452 -0.588 0.125 1.61 39.9 1386 -- --
38.29 0.288 10.4 -0.696 1.19 0.53 0.48 -- 0.118 1.61 39.9 1385 -- --
38.53 0.289 10.4 -0.671 1.21 0.538 -- -0.663 0.125 1.62 39.86 1384 -- --
39.22 0.292 10.4 -0.721 1.2 0.513 -- -- 0.102 1.63 39.86 1385 -- --
38.75 0.29 10.4 -0.767 -- 0.981 -- 0.0415 0.0329 -- 2.52 224 -- --
44.76 0.314 10.4 -0.731 1.16 -- 0.447 -- 0.012 1.65 -- -- -- --
45.55 0.316 10.4 -0.746 1.16 -- -- -- 0.00945 1.66 -- -- -- --
38.65 0.29 10.4 -0.71 -- 0.976 -- -- 0.0484 -- 2.5 219 -- --
51.84 0.335 10.3 -- 1.14 0.418 -- -- 0.213 1.53 41.46 1385 -- --
127.91 0.528 10.4 -0.699 -- -- -- -- 0.0352 -- -- -- -- --
60.22 0.363 10.4 -- 1.15 -- -- -- 0.0925 1.64 -- -- -- --
51.46 0.334 10.3 -- -- 0.994 -- -- 0.13 -- 2.39 220 -- --
140.8 0.554 10.3 -- -- -- -- -- 0.113 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 35.47 wind 9.0 14400 > th dose dependent rect. 20 15
2 35.59 wind 9.0 14400 > th dose dependent rect. 18 17
4 35.80 wind 9.0 14400 > th dose independent rect. 20 9
6 35.84 wind 9.0 14400 > th dose dependent rect. 20 9
10 35.88 wind 9.0 14400 > th dose dependent rect. 18 12
11 35.89 wind 9.0 14400 < th dose independent rect. 20 9
24 35.94 wind 9.0 14400 > th dose independent rect. 20 14
32 36.06 precipitation 0.1 4320 > th dose dependent rect. 13 5
33 36.08 wind 9.0 14400 < th dose independent rect. 20 14
57 36.28 wind 9.0 14400 > th dose independent rect. 20 4
70 36.33 wind 9.0 14400 > th dose dependent rect. 18 4
73 36.34 wind 9.0 14400 > th dose dependent rect. 20 4
83 36.36 precipitation 0.1 4320 > th dose dependent rect. 5 13
97 36.41 precipitation 0.1 4320 > th dose dependent rect. 10 8
103 36.42 radiation 30.0 1440 < th dose independent rect. 15 18
111 36.45 wind 9.0 14400 > th dose dependent sin 10 NA
116 36.48 atmosphere 1005.0 14400 < th dose independent rect. 10 1
129 36.53 temperature 30.0 10 < th dose dependent rect. 1 22
144 36.59 radiation 1.0 43200 < th dose dependent rect. 24 2
186 36.78 precipitation 0.1 4320 < th dose independent rect. 14 4
188 36.78 precipitation 0.1 4320 < th dose dependent rect. 14 4
192 36.79 radiation 30.0 1440 < th dose independent rect. 8 2
193 36.80 precipitation 0.1 4320 > th dose independent rect. 14 4
204 36.85 wind 7.0 43200 > th dose dependent rect. 17 1
214 36.90 precipitation 0.1 4320 < th dose independent rect. 10 8
216 36.90 precipitation 0.1 4320 < th dose dependent rect. 10 8
218 36.92 precipitation 0.1 4320 > th dose independent rect. 10 8
221 36.93 atmosphere 1000.0 43200 < th dose independent rect. 22 1
226 36.93 humidity 70.0 720 > th dose independent rect. 16 5
227 36.94 atmosphere 1000.0 43200 > th dose independent rect. 22 1
240 36.96 radiation 30.0 1440 < th dose independent sin 11 NA
255 37.06 wind 7.0 43200 > th dose independent rect. 17 1
256 37.06 radiation 10.0 1440 > th dose independent rect. 16 21
261 37.08 radiation 30.0 1440 < th dose independent rect. 3 7
270 37.10 radiation 30.0 1440 < th dose independent rect. 18 16
278 37.12 humidity 70.0 720 > th dose independent rect. 16 12
282 37.12 radiation 40.0 1440 < th dose dependent rect. 15 19
289 37.14 atmosphere 1005.0 14400 > th dose independent rect. 10 1
299 37.18 humidity 90.0 14400 < th dose independent rect. 17 1
301 37.18 precipitation 0.1 4320 > th dose independent rect. 6 12
303 37.18 radiation 40.0 1440 < th dose dependent rect. 8 2
308 37.18 radiation 20.0 1440 > th dose dependent rect. 15 18
312 37.20 precipitation 0.1 4320 < th dose independent rect. 17 2
315 37.20 precipitation 0.1 4320 < th dose dependent rect. 17 2
319 37.20 radiation 10.0 720 < th dose dependent rect. 24 19
320 37.21 wind 7.0 43200 < th dose independent rect. 17 1
322 37.21 radiation 30.0 1440 < th dose independent rect. 15 22
325 37.22 precipitation 0.1 4320 > th dose independent rect. 17 2
327 37.22 precipitation 0.1 43200 > th dose dependent rect. 20 1
332 37.24 temperature 30.0 10 < th dose dependent sin 1 NA
335 37.24 radiation 1.0 1440 > th dose dependent rect. 15 19
340 37.26 wind 9.0 43200 > th dose independent rect. 14 7
350 37.27 radiation 20.0 720 < th dose dependent rect. 24 21
359 37.30 radiation 20.0 270 < th dose dependent rect. 6 23
364 37.32 radiation 10.0 270 > th dose independent rect. 12 23
376 37.36 wind 9.0 43200 < th dose independent rect. 14 7
379 37.36 radiation 40.0 1440 < th dose dependent rect. 15 22
395 37.39 radiation 10.0 720 < th dose dependent rect. 7 14
396 37.40 wind 9.0 14400 > th dose independent sin 10 NA
428 37.43 radiation 1.0 1440 > th dose dependent rect. 8 1
459 37.46 radiation 30.0 4320 > th dose independent rect. 7 1
476 37.46 wind 9.0 43200 > th dose independent rect. 14 16
488 37.48 radiation 30.0 1440 > th dose independent rect. 15 19
495 37.49 radiation 10.0 1440 < th dose dependent rect. 7 11
500 37.50 wind 9.0 43200 < th dose independent rect. 14 16
517 37.52 atmosphere 1005.0 14400 < th dose dependent rect. 15 2
519 37.52 wind 9.0 43200 > th dose dependent rect. 14 6
525 37.53 temperature 20.0 1440 > th dose independent rect. 21 1
534 37.54 temperature 20.0 14400 > th dose independent rect. 21 2
536 37.54 humidity 60.0 1440 < th dose independent rect. 11 2
541 37.55 wind 9.0 14400 < th dose independent sin 10 NA
543 37.55 radiation 10.0 1440 > th dose independent rect. 6 7
560 37.55 radiation 1.0 1440 > th dose dependent rect. 15 22
567 37.56 radiation 40.0 1440 < th dose dependent rect. 7 6
580 37.58 humidity 60.0 1440 > th dose independent rect. 11 2
581 37.58 temperature 15.0 10 > th dose dependent sin 1 NA
589 37.59 wind 7.0 43200 > th dose dependent rect. 14 16
622 37.63 atmosphere 1005.0 14400 < th dose dependent rect. 12 8
642 37.64 precipitation 0.1 43200 > th dose dependent rect. 16 2
657 37.65 atmosphere 1005.0 14400 < th dose dependent rect. 19 1
680 37.67 temperature 20.0 14400 < th dose independent rect. 21 2
685 37.67 temperature 15.0 1440 > th dose dependent rect. 17 3
699 37.68 wind 9.0 43200 < th dose independent rect. 14 11
702 37.68 radiation 40.0 1440 < th dose independent rect. 12 22
715 37.68 radiation 1.0 1440 > th dose dependent rect. 12 22
728 37.69 radiation 10.0 1440 > th dose dependent sin 8 NA
734 37.69 radiation 1.0 1440 > th dose dependent rect. 7 6
743 37.70 radiation 10.0 1440 > th dose independent rect. 8 2
744 37.70 temperature 20.0 1440 > th dose independent rect. 20 3
753 37.70 radiation 10.0 1440 > th dose dependent sin 11 NA
762 37.70 radiation 40.0 1440 < th dose dependent rect. 11 23
763 37.71 radiation 10.0 1440 > th dose independent sin 7 NA
782 37.71 radiation 20.0 270 < th dose dependent rect. 21 23
790 37.72 atmosphere 1005.0 14400 < th dose dependent rect. 12 1
793 37.72 wind 7.0 43200 > th dose dependent rect. 15 3
806 37.73 humidity 60.0 720 > th dose independent rect. 24 21
842 37.73 radiation 30.0 1440 > th dose dependent rect. 12 22
854 37.74 atmosphere 1005.0 14400 < th dose dependent sin 19 NA
882 37.76 temperature 20.0 1440 < th dose independent rect. 20 3
916 37.77 humidity 60.0 720 > th dose independent rect. 10 18
931 37.78 wind 9.0 43200 > th dose independent sin 13 NA
940 37.78 temperature 30.0 1440 < th dose dependent rect. 17 4
942 37.78 radiation 40.0 1440 < th dose dependent rect. 7 11
945 37.78 radiation 40.0 1440 < th dose dependent rect. 7 15
989 37.80 humidity 70.0 720 > th dose independent rect. 16 20