Os07g0659300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os07g0659300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = sin)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 213.97 | 0.687 | 9.57 | 0.112 | 3.79 | -2.6 | -1.24 | 1.54 | -0.355 | 9.79 | 26.07 | 425 | 7.8 | -- |
| 213.15 | 0.68 | 9.61 | -0.0223 | 3.8 | -2.64 | -1.36 | -- | -0.417 | 9.77 | 26.2 | 452 | 7.91 | -- |
| 215.44 | 0.684 | 9.57 | 0.332 | 3.89 | -2.99 | -- | 3.98 | -0.331 | 9.71 | 26.2 | 457 | 7.21 | -- |
| 220.07 | 0.691 | 9.59 | -0.0781 | 3.87 | -2.79 | -- | -- | -0.439 | 9.69 | 26.2 | 455 | 7.39 | -- |
| 720.62 | 1.25 | 9.5 | 1.41 | -- | -5 | -- | 4.78 | 0.862 | -- | 25.4 | 498 | 11 | -- |
| 304.39 | 0.818 | 9.64 | -0.338 | 4.72 | -- | -1.25 | -- | -0.768 | 9.76 | -- | -- | -- | -- |
| 310.34 | 0.825 | 9.64 | -0.385 | 4.72 | -- | -- | -- | -0.77 | 9.77 | -- | -- | -- | -- |
| 692.8 | 1.23 | 9.51 | 0.39 | -- | -4.67 | -- | -- | 0.378 | -- | 25.02 | 541 | 11.7 | -- |
| 220.2 | 0.691 | 9.59 | -- | 3.9 | -2.79 | -- | -- | -0.437 | 9.69 | 26.21 | 455 | 7.31 | -- |
| 1640.31 | 1.89 | 9.77 | -0.431 | -- | -- | -- | -- | -0.766 | -- | -- | -- | -- | -- |
| 314.25 | 0.829 | 9.63 | -- | 4.73 | -- | -- | -- | -0.727 | 9.78 | -- | -- | -- | -- |
| 314.25 | 0.826 | 9.76 | -- | -- | -4.72 | -- | -- | -0.727 | -- | 13.66 | 48 | 8.62 | -- |
| 1645.22 | 1.89 | 9.76 | -- | -- | -- | -- | -- | -0.718 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 227.76 | temperature | 25 | 270 | > th | dose independent | rect. | 16 | 9 |
| 5 | 232.74 | temperature | 25 | 720 | > th | dose dependent | rect. | 16 | 4 |
| 10 | 233.70 | temperature | 20 | 270 | > th | dose dependent | rect. | 17 | 10 |
| 11 | 234.01 | temperature | 25 | 720 | > th | dose dependent | rect. | 16 | 8 |
| 34 | 236.83 | temperature | 25 | 720 | > th | dose independent | rect. | 17 | 2 |
| 100 | 242.03 | temperature | 25 | 720 | > th | dose dependent | sin | 14 | NA |
| 113 | 243.34 | radiation | 10 | 720 | > th | dose independent | rect. | 16 | 1 |
| 162 | 246.47 | temperature | 25 | 270 | > th | dose independent | sin | 14 | NA |
| 177 | 247.16 | radiation | 10 | 720 | > th | dose independent | rect. | 16 | 14 |
| 199 | 247.57 | temperature | 25 | 270 | < th | dose independent | sin | 14 | NA |
| 203 | 247.73 | humidity | 70 | 720 | > th | dose independent | rect. | 18 | 6 |
| 247 | 248.81 | radiation | 1 | 720 | > th | dose dependent | rect. | 16 | 2 |
| 249 | 248.94 | temperature | 30 | 720 | < th | dose independent | rect. | 17 | 7 |
| 252 | 249.02 | radiation | 1 | 720 | > th | dose dependent | rect. | 16 | 13 |
| 256 | 249.17 | temperature | 25 | 270 | < th | dose independent | rect. | 17 | 13 |
| 273 | 249.38 | radiation | 1 | 720 | < th | dose independent | rect. | 17 | 7 |
| 276 | 249.44 | radiation | 10 | 720 | < th | dose dependent | rect. | 16 | 8 |
| 304 | 250.37 | humidity | 70 | 720 | > th | dose independent | rect. | 18 | 13 |
| 306 | 250.50 | temperature | 25 | 270 | < th | dose independent | rect. | 16 | 9 |
| 319 | 250.87 | temperature | 25 | 720 | < th | dose independent | rect. | 17 | 5 |
| 351 | 251.95 | temperature | 25 | 720 | < th | dose independent | rect. | 17 | 3 |
| 376 | 252.77 | humidity | 80 | 720 | < th | dose independent | rect. | 16 | 3 |
| 382 | 252.92 | radiation | 10 | 720 | < th | dose dependent | rect. | 14 | 10 |
| 400 | 253.56 | humidity | 90 | 720 | < th | dose dependent | rect. | 17 | 2 |
| 403 | 253.63 | temperature | 30 | 720 | < th | dose dependent | rect. | 19 | 1 |
| 406 | 253.69 | temperature | 30 | 720 | < th | dose dependent | rect. | 16 | 6 |
| 543 | 256.29 | humidity | 70 | 720 | > th | dose independent | rect. | 14 | 10 |
| 586 | 257.15 | humidity | 70 | 720 | > th | dose independent | rect. | 14 | 17 |
| 752 | 259.45 | temperature | 30 | 270 | < th | dose dependent | rect. | 17 | 13 |
| 756 | 259.55 | humidity | 70 | 720 | > th | dose independent | sin | 12 | NA |
| 986 | 262.28 | radiation | 10 | 720 | < th | dose independent | rect. | 16 | 1 |
| 989 | 262.30 | humidity | 70 | 720 | < th | dose independent | rect. | 17 | 15 |