Os07g0657500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os07g0657500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = precipitation,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 17.42 | 0.196 | 9.8 | 0.216 | 0.996 | 0.0304 | 0.187 | 1.12 | 0.138 | 5.7 | 0.654 | 5167 | -- | -- |
| 16.85 | 0.191 | 9.82 | 0.0794 | 1 | 0.316 | 0.185 | -- | 0.143 | 5.71 | 0.9127 | 12482 | -- | -- |
| 17.5 | 0.195 | 9.8 | 0.224 | 0.998 | 0.0169 | -- | 1.15 | 0.138 | 5.72 | 0.7041 | 5167 | -- | -- |
| 16.91 | 0.192 | 9.83 | 0.0809 | 1.01 | 0.355 | -- | -- | 0.137 | 5.75 | 1 | 15360 | -- | -- |
| 68.64 | 0.386 | 9.79 | 0.3 | -- | -0.204 | -- | 2.05 | 0.166 | -- | 0.6853 | 6040 | -- | -- |
| 20.33 | 0.211 | 9.83 | 0.236 | 0.999 | -- | 0.239 | -- | 0.113 | 5.65 | -- | -- | -- | -- |
| 20.47 | 0.212 | 9.83 | 0.237 | 1 | -- | -- | -- | 0.112 | 5.67 | -- | -- | -- | -- |
| 69.06 | 0.387 | 9.84 | 0.117 | -- | 0.356 | -- | -- | 0.167 | -- | 0.9736 | 15441 | -- | -- |
| 17.05 | 0.192 | 9.83 | -- | 1 | 0.392 | -- | -- | 0.139 | 5.69 | 1 | 16360 | -- | -- |
| 72.43 | 0.398 | 9.85 | 0.269 | -- | -- | -- | -- | 0.136 | -- | -- | -- | -- | -- |
| 21.95 | 0.219 | 9.84 | -- | 1 | -- | -- | -- | 0.0858 | 5.66 | -- | -- | -- | -- |
| 69.37 | 0.388 | 9.84 | -- | -- | 0.397 | -- | -- | 0.159 | -- | 0.9802 | 15372 | -- | -- |
| 74.34 | 0.402 | 9.85 | -- | -- | -- | -- | -- | 0.106 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 16.04 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 24 | 4 |
| 4 | 16.70 | radiation | 20.0 | 43200 | > th | dose independent | rect. | 10 | 2 |
| 10 | 16.81 | radiation | 20.0 | 43200 | < th | dose dependent | rect. | 10 | 1 |
| 26 | 16.90 | radiation | 10.0 | 43200 | > th | dose dependent | rect. | 11 | 1 |
| 48 | 16.97 | radiation | 10.0 | 43200 | > th | dose independent | rect. | 7 | 6 |
| 55 | 17.00 | radiation | 20.0 | 43200 | < th | dose independent | rect. | 10 | 1 |
| 85 | 17.02 | radiation | 40.0 | 43200 | < th | dose independent | rect. | 11 | 1 |
| 93 | 17.03 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 17 | 5 |
| 249 | 17.09 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 17 | 1 |
| 250 | 17.09 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 17 | 1 |
| 286 | 17.09 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 17 | 1 |
| 337 | 17.12 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 15 | 4 |
| 338 | 17.12 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 15 | 4 |
| 385 | 17.12 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 24 | 2 |
| 386 | 17.12 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 15 | 4 |
| 388 | 17.13 | radiation | 10.0 | 43200 | > th | dose independent | sin | 7 | NA |
| 392 | 17.13 | radiation | 30.0 | 43200 | > th | dose independent | sin | 3 | NA |
| 423 | 17.13 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 16 | 2 |
| 429 | 17.14 | radiation | 40.0 | 43200 | > th | dose independent | sin | 7 | NA |
| 431 | 17.14 | radiation | 30.0 | 43200 | > th | dose independent | sin | 1 | NA |
| 515 | 17.16 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 21 | 1 |
| 584 | 17.17 | radiation | 40.0 | 43200 | > th | dose independent | no | NA | NA |
| 759 | 17.18 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 6 | 12 |
| 894 | 17.18 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 6 | 12 |
| 901 | 17.18 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 3 | 15 |
| 924 | 17.19 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 4 | 14 |
| 936 | 17.19 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 8 | 4 |
| 970 | 17.19 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 4 | 14 |
| 992 | 17.20 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 4 | 14 |