Os07g0656600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Ribosomal protein L14b/L23e family protein.
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Os07g0656600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Ribosomal protein L14b/L23e family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 874.57 | 1.39 | 6.65 | 0.773 | 3.98 | -4.39 | 4.62 | 2.02 | -1.59 | 8.56 | 19.8 | 2641 | -- | -- |
| 881.3 | 1.38 | 6.72 | 0.46 | 3.98 | -4.74 | 4.69 | -- | -1.64 | 8.55 | 19.9 | 2650 | -- | -- |
| 939.06 | 1.43 | 6.64 | 1.06 | 4.02 | -4.39 | -- | 2.32 | -1.54 | 8.63 | 19.97 | 2789 | -- | -- |
| 947.24 | 1.43 | 6.71 | 0.683 | 4.02 | -4.87 | -- | -- | -1.63 | 8.63 | 19.83 | 2770 | -- | -- |
| 1764.59 | 1.96 | 6.72 | 0.993 | -- | -4.48 | -- | 2.6 | -1.39 | -- | 20.9 | 2251 | -- | -- |
| 1325.06 | 1.71 | 6.98 | -2.06 | 4.02 | -- | 4.64 | -- | -2.82 | 8.75 | -- | -- | -- | -- |
| 1396.33 | 1.75 | 6.98 | -1.91 | 4 | -- | -- | -- | -2.82 | 8.83 | -- | -- | -- | -- |
| 1766.25 | 1.96 | 6.8 | 0.396 | -- | -4.77 | -- | -- | -1.52 | -- | 20.86 | 2239 | -- | -- |
| 956.03 | 1.44 | 6.75 | -- | 4 | -4.52 | -- | -- | -1.77 | 8.64 | 19.82 | 2759 | -- | -- |
| 2308.44 | 2.25 | 7.09 | -1.91 | -- | -- | -- | -- | -2.79 | -- | -- | -- | -- | -- |
| 1492.26 | 1.81 | 6.93 | -- | 4 | -- | -- | -- | -2.6 | 8.87 | -- | -- | -- | -- |
| 1769.58 | 1.96 | 6.82 | -- | -- | -4.6 | -- | -- | -1.6 | -- | 20.8 | 2230 | -- | -- |
| 2404.2 | 2.29 | 7.04 | -- | -- | -- | -- | -- | -2.57 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 839.99 | temperature | 20 | 14400 | < th | dose independent | rect. | 21 | 1 |
| 2 | 840.42 | temperature | 20 | 14400 | > th | dose independent | rect. | 21 | 1 |
| 15 | 864.23 | wind | 3 | 43200 | < th | dose dependent | rect. | 5 | 1 |
| 19 | 866.51 | temperature | 20 | 1440 | > th | dose independent | rect. | 22 | 10 |
| 20 | 866.69 | temperature | 20 | 1440 | < th | dose independent | rect. | 22 | 10 |
| 21 | 867.02 | temperature | 20 | 1440 | > th | dose independent | rect. | 5 | 2 |
| 24 | 868.15 | wind | 1 | 43200 | > th | dose dependent | rect. | 1 | 1 |
| 34 | 869.64 | temperature | 20 | 1440 | < th | dose independent | rect. | 1 | 7 |
| 36 | 869.66 | temperature | 20 | 1440 | < th | dose independent | rect. | 5 | 2 |
| 40 | 870.21 | temperature | 20 | 1440 | > th | dose independent | rect. | 1 | 7 |
| 64 | 873.74 | temperature | 20 | 1440 | > th | dose independent | sin | 9 | NA |
| 74 | 874.98 | temperature | 20 | 1440 | < th | dose independent | sin | 9 | NA |
| 76 | 875.10 | wind | 1 | 14400 | > th | dose independent | rect. | 24 | 2 |
| 106 | 877.80 | wind | 1 | 14400 | < th | dose independent | rect. | 22 | 4 |
| 116 | 878.68 | wind | 9 | 43200 | < th | dose dependent | rect. | 5 | 1 |
| 123 | 878.93 | wind | 9 | 43200 | < th | dose dependent | rect. | 1 | 1 |
| 178 | 883.13 | wind | 1 | 14400 | < th | dose dependent | rect. | 22 | 6 |
| 181 | 883.23 | wind | 3 | 43200 | < th | dose independent | rect. | 6 | 7 |
| 187 | 883.70 | wind | 1 | 43200 | > th | dose dependent | rect. | 5 | 1 |
| 208 | 885.19 | temperature | 25 | 14400 | < th | dose independent | rect. | 10 | 2 |
| 216 | 885.63 | wind | 3 | 43200 | > th | dose independent | rect. | 6 | 7 |
| 219 | 885.92 | wind | 1 | 14400 | < th | dose dependent | rect. | 19 | 12 |
| 242 | 887.11 | wind | 9 | 43200 | > th | dose independent | rect. | 10 | 3 |
| 244 | 887.23 | temperature | 25 | 14400 | < th | dose independent | rect. | 10 | 4 |
| 245 | 887.27 | wind | 3 | 43200 | < th | dose dependent | rect. | 21 | 9 |
| 247 | 887.35 | temperature | 25 | 14400 | > th | dose independent | rect. | 11 | 1 |
| 266 | 888.32 | temperature | 25 | 14400 | > th | dose independent | rect. | 10 | 3 |
| 287 | 889.31 | wind | 9 | 43200 | > th | dose independent | rect. | 9 | 6 |
| 297 | 889.81 | wind | 9 | 43200 | < th | dose independent | rect. | 9 | 5 |
| 314 | 890.54 | wind | 3 | 43200 | > th | dose independent | rect. | 11 | 1 |
| 332 | 891.42 | wind | 1 | 43200 | < th | dose dependent | rect. | 24 | 2 |
| 340 | 891.74 | wind | 3 | 43200 | < th | dose independent | rect. | 11 | 1 |
| 368 | 892.91 | wind | 9 | 43200 | < th | dose independent | rect. | 10 | 3 |
| 427 | 895.42 | wind | 9 | 43200 | < th | dose independent | rect. | 8 | 8 |
| 464 | 896.79 | wind | 3 | 43200 | < th | dose dependent | rect. | 5 | 8 |
| 473 | 897.14 | wind | 3 | 43200 | < th | dose dependent | rect. | 21 | 16 |
| 480 | 897.48 | wind | 3 | 43200 | < th | dose dependent | rect. | 8 | 1 |
| 492 | 897.93 | temperature | 25 | 14400 | < th | dose independent | rect. | 13 | 1 |
| 507 | 898.60 | wind | 7 | 43200 | > th | dose dependent | rect. | 10 | 4 |
| 548 | 900.39 | temperature | 20 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 566 | 900.73 | wind | 1 | 14400 | < th | dose dependent | sin | 11 | NA |
| 624 | 902.64 | wind | 9 | 43200 | < th | dose dependent | rect. | 5 | 9 |
| 641 | 903.00 | wind | 9 | 43200 | < th | dose dependent | rect. | 22 | 5 |
| 645 | 903.15 | temperature | 20 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 788 | 906.47 | wind | 9 | 43200 | < th | dose independent | rect. | 4 | 13 |
| 832 | 907.30 | wind | 1 | 43200 | > th | dose dependent | rect. | 5 | 9 |
| 859 | 907.94 | wind | 3 | 43200 | < th | dose independent | rect. | 1 | 14 |
| 865 | 908.03 | wind | 9 | 43200 | < th | dose dependent | rect. | 22 | 17 |
| 889 | 908.40 | wind | 3 | 43200 | > th | dose independent | rect. | 1 | 14 |
| 913 | 908.90 | wind | 9 | 43200 | > th | dose independent | sin | 0 | NA |
| 944 | 909.35 | wind | 1 | 43200 | > th | dose dependent | rect. | 22 | 5 |