Os07g0655900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os07g0655900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 61.53 | 0.369 | 9.28 | -1.08 | 0.436 | -0.741 | -0.532 | 0.165 | -0.533 | 11.3 | 74.99 | 2704 | -- | -- |
| 61.56 | 0.365 | 9.27 | -1.05 | 0.434 | -0.722 | -0.521 | -- | -0.525 | 11.3 | 74.63 | 2701 | -- | -- |
| 62.72 | 0.369 | 9.27 | -1.08 | 0.44 | -0.738 | -- | 0.0407 | -0.53 | 11.2 | 75 | 2703 | -- | -- |
| 62.72 | 0.369 | 9.27 | -1.08 | 0.441 | -0.736 | -- | -- | -0.529 | 11.3 | 75 | 2703 | -- | -- |
| 71.51 | 0.394 | 9.29 | -1.09 | -- | -0.751 | -- | 0.112 | -0.546 | -- | 75 | 2970 | -- | -- |
| 74.09 | 0.404 | 9.25 | -0.995 | 0.355 | -- | -0.616 | -- | -0.433 | 10.9 | -- | -- | -- | -- |
| 75.67 | 0.407 | 9.25 | -1.02 | 0.36 | -- | -- | -- | -0.435 | 10.7 | -- | -- | -- | -- |
| 71.54 | 0.394 | 9.29 | -1.07 | -- | -0.733 | -- | -- | -0.548 | -- | 74.44 | 2970 | -- | -- |
| 93.5 | 0.45 | 9.27 | -- | 0.432 | -0.638 | -- | -- | -0.484 | 11.3 | 74 | 2787 | -- | -- |
| 83.65 | 0.427 | 9.26 | -1.03 | -- | -- | -- | -- | -0.437 | -- | -- | -- | -- | -- |
| 103.14 | 0.475 | 9.23 | -- | 0.367 | -- | -- | -- | -0.322 | 10.9 | -- | -- | -- | -- |
| 101.67 | 0.47 | 9.26 | -- | -- | -0.67 | -- | -- | -0.421 | -- | 74.27 | 3017 | -- | -- |
| 111.51 | 0.493 | 9.24 | -- | -- | -- | -- | -- | -0.323 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 63.31 | humidity | 70.0 | 1440 | > th | dose dependent | rect. | 11 | 1 |
| 2 | 63.55 | humidity | 50.0 | 1440 | > th | dose dependent | rect. | 1 | 18 |
| 6 | 63.62 | humidity | 80.0 | 1440 | < th | dose dependent | rect. | 15 | 18 |
| 19 | 63.75 | humidity | 50.0 | 1440 | > th | dose dependent | sin | 3 | NA |
| 43 | 63.86 | humidity | 90.0 | 1440 | < th | dose dependent | rect. | 1 | 18 |
| 75 | 63.92 | humidity | 50.0 | 1440 | > th | dose dependent | rect. | 15 | 22 |
| 104 | 63.97 | humidity | 50.0 | 1440 | > th | dose dependent | rect. | 17 | 23 |
| 116 | 64.00 | humidity | 50.0 | 1440 | > th | dose dependent | no | NA | NA |
| 122 | 64.01 | humidity | 80.0 | 1440 | < th | dose dependent | sin | 11 | NA |
| 128 | 64.01 | humidity | 80.0 | 1440 | < th | dose dependent | rect. | 11 | 22 |
| 136 | 64.02 | humidity | 50.0 | 1440 | > th | dose dependent | rect. | 4 | 23 |
| 152 | 64.05 | humidity | 70.0 | 1440 | > th | dose dependent | rect. | 6 | 8 |
| 172 | 64.06 | humidity | 50.0 | 1440 | > th | dose dependent | rect. | 10 | 23 |
| 199 | 64.10 | humidity | 90.0 | 1440 | < th | dose dependent | no | NA | NA |
| 238 | 64.13 | humidity | 90.0 | 1440 | < th | dose dependent | rect. | 5 | 23 |
| 242 | 64.14 | humidity | 90.0 | 1440 | < th | dose dependent | sin | 3 | NA |
| 250 | 64.15 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 15 | 19 |
| 314 | 64.22 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 5 | 9 |
| 316 | 64.22 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 2 | 3 |
| 398 | 64.30 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 11 | 1 |
| 506 | 64.38 | humidity | 70.0 | 1440 | < th | dose independent | rect. | 15 | 19 |
| 517 | 64.39 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 12 | 1 |
| 518 | 64.39 | humidity | 80.0 | 1440 | < th | dose dependent | rect. | 15 | 4 |
| 535 | 64.40 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 15 | 22 |
| 555 | 64.41 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 11 | 23 |
| 569 | 64.42 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 5 | 9 |
| 594 | 64.44 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 17 | 20 |
| 664 | 64.49 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 11 | 1 |
| 734 | 64.54 | humidity | 70.0 | 1440 | > th | dose independent | sin | 11 | NA |
| 748 | 64.55 | humidity | 70.0 | 1440 | > th | dose independent | sin | 15 | NA |
| 752 | 64.55 | humidity | 80.0 | 1440 | < th | dose dependent | rect. | 11 | 10 |
| 805 | 64.60 | humidity | 80.0 | 1440 | < th | dose independent | sin | 4 | NA |
| 823 | 64.61 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 15 | 11 |
| 843 | 64.62 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 15 | 5 |
| 882 | 64.65 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 17 | 23 |
| 928 | 64.69 | humidity | 70.0 | 90 | > th | dose dependent | rect. | 9 | 18 |
| 967 | 64.73 | humidity | 80.0 | 1440 | > th | dose independent | sin | 3 | NA |
| 999 | 64.75 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 21 | 20 |
| 1000 | 64.76 | humidity | 70.0 | 1440 | < th | dose independent | rect. | 15 | 5 |