BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os07g0655900 Os07g0655900|AK069576
(269 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G03260.1 | chr1:795678-798102 REVERSE LENGTH=275 347 3e-96
AT5G19070.1 | chr5:6375569-6377470 FORWARD LENGTH=281 334 3e-92
AT1G22850.1 | chr1:8080671-8082816 REVERSE LENGTH=345 83 2e-16
AT2G02370.1 | chr2:621841-623084 FORWARD LENGTH=321 64 1e-10
AT1G12450.1 | chr1:4244496-4245808 FORWARD LENGTH=304 49 2e-06
AT4G09580.1 | chr4:6052721-6054313 REVERSE LENGTH=288 49 2e-06
AT4G12000.1 | chr4:7193527-7194942 REVERSE LENGTH=307 49 4e-06
AT4G22850.1 | chr4:11994194-11995941 FORWARD LENGTH=297 48 5e-06
>AT1G03260.1 | chr1:795678-798102 REVERSE LENGTH=275
Length = 274
Score = 347 bits (891), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 173/268 (64%), Positives = 207/268 (77%), Gaps = 11/268 (4%)
Query: 6 PSAIRXXXXXXXXXXXXXXXFTLPVDKILKDFLVWIKDNLGPWGPLVLALAYVPLTVLAV 65
PS R LPV++ LKDFL+WIK++LGP+GPL LALAY+PLT++AV
Sbjct: 8 PSTFRIAISLLLLVAIVSAVIFLPVEQKLKDFLLWIKEDLGPFGPLALALAYIPLTIVAV 67
Query: 66 PASILTLGGGYLFGLPVGFVADSIGATIGATAAFLLGRTIGRPYVLSKCKDYPKFQAVAI 125
PAS+LTLGGGYLFGLPVGFVADS+GAT+GATAAFLLGRTIG+ YV SK K YPKFQAV++
Sbjct: 68 PASVLTLGGGYLFGLPVGFVADSLGATLGATAAFLLGRTIGKSYVTSKIKHYPKFQAVSV 127
Query: 126 AIERSGFKIXXXXXXXXXXXFNMLNYLLSVTPVGIGEYMLASWLGMMPITLALVYVGTTL 185
AI++SGFKI FNMLNYLLSVTPV +GEYMLA+WLGMMPIT ALVYVGTTL
Sbjct: 128 AIQKSGFKIVLLLRVVPILPFNMLNYLLSVTPVRLGEYMLATWLGMMPITFALVYVGTTL 187
Query: 186 KDLSDVTHGWSEISTTRWILIISGFILSVVLIVCVTRIAKSSLEKALAENG--------- 236
KDLSD+THGW E+S RW++++ G L+V+LI+C+TR+AKSSL+KALAENG
Sbjct: 188 KDLSDITHGWHEVSVFRWVIMMVGVALAVILIICITRVAKSSLDKALAENGTELDGKKND 247
Query: 237 DAGIPQLPVVASPSDLQQPLVIRIDTSN 264
DA + LP+ P DLQ+PLVIRID SN
Sbjct: 248 DASV--LPIAEPPPDLQEPLVIRIDPSN 273
>AT5G19070.1 | chr5:6375569-6377470 FORWARD LENGTH=281
Length = 280
Score = 334 bits (856), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 164/275 (59%), Positives = 208/275 (75%), Gaps = 7/275 (2%)
Query: 1 MALSWPSAIRXXXXXXXXXXXXXXXFTLPVDKILKDFLVWIKDNLGPWGPLVLALAYVPL 60
MA +W SA+R + LPV+K+LKDFL+W++ +LGPWGP LA+AY+PL
Sbjct: 1 MAFTWGSALRISVLLILVAAIVLACYFLPVEKLLKDFLLWVEQDLGPWGPFALAVAYIPL 60
Query: 61 TVLAVPASILTLGGGYLFGLPVGFVADSIGATIGATAAFLLGRTIGRPYVLSKCKDYPKF 120
TVLAVPAS+LTLGGGYLFGLP+GFVADS+GAT+G+ AAFLLGRTIG+P+V++K KDYP+F
Sbjct: 61 TVLAVPASVLTLGGGYLFGLPIGFVADSVGATLGSGAAFLLGRTIGKPFVVAKLKDYPQF 120
Query: 121 QAVAIAIERSGFKIXXXXXXXXXXXFNMLNYLLSVTPVGIGEYMLASWLGMMPITLALVY 180
Q+VA+AIE+SGFKI F+MLNYLLSVTP+ +G Y+L+SWLGMMPITLALVY
Sbjct: 121 QSVALAIEKSGFKICLLLRLAPLLPFSMLNYLLSVTPIRLGPYLLSSWLGMMPITLALVY 180
Query: 181 VGTTLKDLSDVTHGWSEISTTRWILIISGFILSVVLIVCVTRIAKSSLEKALAENGD--- 237
VGTTLKDLSDVTH WSE S RW +IS ++SV+L+VCVT++AK +L KALAE+G
Sbjct: 181 VGTTLKDLSDVTHKWSEFSPGRWAFLISSLVISVILMVCVTKVAKDALRKALAEHGGDMN 240
Query: 238 ---AGIPQLPVVASPS-DLQQPLVIRIDTSNEDHE 268
A +P+L V S DL +PL+I+ID +
Sbjct: 241 EAVAALPELTVTDDASTDLNEPLLIKIDAQQPQDQ 275
>AT1G22850.1 | chr1:8080671-8082816 REVERSE LENGTH=345
Length = 344
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 53/153 (34%), Positives = 78/153 (50%), Gaps = 1/153 (0%)
Query: 30 VDKILKDFLVWIKDNLGPWGPLVLALAYVPLTVLAVPASILTLGGGYLFGLPVGFVADSI 89
++ L F +I + G G + Y L +LA+PA LT+ G LFG +G + SI
Sbjct: 134 INTFLTQFSTYI-EGYGTAGYALFIAVYAGLEILAIPALPLTMSAGLLFGPLIGTIIVSI 192
Query: 90 GATIGATAAFLLGRTIGRPYVLSKCKDYPKFQAVAIAIERSGFKIXXXXXXXXXXXFNML 149
T+ A+ AFL+ R R +L +D KF A+ AI +GF++ F++
Sbjct: 193 SGTMAASVAFLIARYFARERILKLVEDNKKFLAIDKAIGENGFRVVTLLRLSPLLPFSLG 252
Query: 150 NYLLSVTPVGIGEYMLASWLGMMPITLALVYVG 182
NYL +T V Y+L SWLGM+P + A V G
Sbjct: 253 NYLYGLTSVKFVPYVLGSWLGMLPGSWAYVSAG 285
>AT2G02370.1 | chr2:621841-623084 FORWARD LENGTH=321
Length = 320
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 92/213 (43%), Gaps = 7/213 (3%)
Query: 31 DKILKDFLVWIKDNLG-PWGPLVLALAYVPLTVLAVPASILTLGGGYLFGLPVGFVADSI 89
K+L L W G P +VL ++ V +P+ G +FG +GFV +
Sbjct: 82 QKVLIPILQWEATAFGRPMLAIVLVVSLALFPVFLIPSGPSMWLAGMIFGYGLGFVIIMV 141
Query: 90 GATIGATAAFLLGRTIGRPYVLSKCKDYPKFQAV-AIAIERSGFKIXXXXXXXXXXXF-- 146
G TIG +L+G + R + K +P+ AV +A E S F F
Sbjct: 142 GTTIGMVLPYLIG-LMFRDRLHQWLKRWPRQAAVLRLAAEGSWFHQFRVVAIFRVSPFPY 200
Query: 147 NMLNYLLSVTPVGIGEYMLASWLGMMPITLALVYVGTTLKDLSDVTHGWSEISTTRWILI 206
+ NY + VT + Y S GM+P +Y G ++ +DV +G ++T +
Sbjct: 201 TIFNYAIVVTSMRFWPYFFGSIAGMIPEAFIYIYSGRLIRTFADVQYGHQRLTTVEIVYN 260
Query: 207 ISGFILSVVLIVCVTRIAKSSLEKALAENGDAG 239
+ +++VV V T AK +L + +N +A
Sbjct: 261 VISLVIAVVTTVAFTVYAKRALRE--LQNAEAN 291
>AT1G12450.1 | chr1:4244496-4245808 FORWARD LENGTH=304
Length = 303
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 87/210 (41%), Gaps = 5/210 (2%)
Query: 30 VDKILKDFLVWIKDNLG-PWGPLVLALAYVPLTVLAVPASILTLGGGYLFGLPVGFVADS 88
++K L F+ W+++ P L+L + + +P+S G FG GF+
Sbjct: 85 IEKELIPFINWVRNTFSIPVLGLLLFASVALFPSILLPSSPSMWMAGLTFGYGKGFLLIL 144
Query: 89 IGATIGATAAFLLGRTIGRPYVLSKCKDYPKFQAVAIAI-ERSGFKIXXXXXXXXXXXFN 147
A+IG T FL+G + K YPK A+ A E + F F
Sbjct: 145 SAASIGVTLPFLIGHLFLHK-MQEWLKKYPKKAAILRAAGEGTWFHQFQAVTLIRVSPFP 203
Query: 148 ML--NYLLSVTPVGIGEYMLASWLGMMPITLALVYVGTTLKDLSDVTHGWSEISTTRWIL 205
+ NY T V G Y+L S +GM+P +Y G L+ L+ + +S ++
Sbjct: 204 YIIYNYCALATGVHYGPYILGSLVGMVPEIFVSIYTGIMLRTLAVASDTRHTLSVVEIVV 263
Query: 206 IISGFILSVVLIVCVTRIAKSSLEKALAEN 235
+ GF ++ + T AK L +E+
Sbjct: 264 NVLGFCVTASATIVCTIYAKKKLSAMQSED 293
>AT4G09580.1 | chr4:6052721-6054313 REVERSE LENGTH=288
Length = 287
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 78/189 (41%), Gaps = 42/189 (22%)
Query: 28 LPVDKILKDFLVWIKDNLGPWGPLVLAL-------AYVPLTVLAVPASI-LTLGGGYLFG 79
L V + + D L +K+NLG + A Y+ + +P +I ++L G LFG
Sbjct: 84 LKVPRTISD-LRLLKENLGSYASEYQARFILGYCSTYIFMQTFMIPGTIFMSLLAGALFG 142
Query: 80 LPVGFVADSIGATIGATAAFLLGRTIGRPYVLSKCKDYPKFQAVAIAIERSGFKIXXXXX 139
+ GFV + AT GA + F L + +GRP V + +F IA R
Sbjct: 143 VVRGFVLVVLNATAGACSCFFLSKLVGRPLVNWLWPEKLRFFQAEIAKRRD--------- 193
Query: 140 XXXXXXFNMLNYL--LSVTP---------------VGIGEYMLASWLGMMPITLALVYVG 182
+LNY+ L +TP + + LA+ +G+MP + V G
Sbjct: 194 -------RLLNYMLFLRITPTLPNLFINLSSPIVDIPFHVFFLATLVGLMPASYITVRAG 246
Query: 183 TTLKDLSDV 191
L DL V
Sbjct: 247 LALGDLRSV 255
>AT4G12000.1 | chr4:7193527-7194942 REVERSE LENGTH=307
Length = 306
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 45/91 (49%), Gaps = 1/91 (1%)
Query: 146 FNMLNYLLSVTPVGIGEYMLASWLGMMPITLALVYVGTTLKDLSDVTHGWSE-ISTTRWI 204
F + NY T V G YM S +GM P +Y G ++ L+D + + +S + +
Sbjct: 210 FAVYNYCAVATRVKFGPYMAGSLVGMAPEIFVAIYTGILIRTLADASTAEQKGLSILQIV 269
Query: 205 LIISGFILSVVLIVCVTRIAKSSLEKALAEN 235
L I GF+ +VV V +T+ AK LE E
Sbjct: 270 LNIFGFVATVVTTVLITKYAKRQLEVMKKEK 300
>AT4G22850.1 | chr4:11994194-11995941 FORWARD LENGTH=297
Length = 296
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 70/166 (42%), Gaps = 5/166 (3%)
Query: 74 GGYLFGLPVGFVADSIGATIGATAAFLLGRTIGRPYVLSKCKDYPKFQAVAIAIERSGFK 133
G FG GF+ A +G + + +G+ + + YP AV A +
Sbjct: 127 AGMTFGYGYGFLLIISAAAVGVSLPYFIGQLFCHK-IQGWLERYPDQAAVLRAAGEGNWL 185
Query: 134 ---IXXXXXXXXXXXFNMLNYLLSVTPVGIGEYMLASWLGMMPITLALVYVGTTLKDLSD 190
+ + + NY T V G Y+ S LGM+P +Y G ++ L++
Sbjct: 186 HQFLLVTLIRISPFPYILYNYCSVATRVKYGPYITGSLLGMVPEVFVAIYTGILVRTLAE 245
Query: 191 VTHGWSE-ISTTRWILIISGFILSVVLIVCVTRIAKSSLEKALAEN 235
+ + +S T+ IL I GF+ +V + +T+ AK LE E+
Sbjct: 246 ASSAEEQGLSVTQVILNILGFLATVATTILITKYAKRQLETMKKED 291
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.323 0.140 0.426
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 4,963,022
Number of extensions: 179548
Number of successful extensions: 472
Number of sequences better than 1.0e-05: 9
Number of HSP's gapped: 470
Number of HSP's successfully gapped: 9
Length of query: 269
Length of database: 11,106,569
Length adjustment: 97
Effective length of query: 172
Effective length of database: 8,447,217
Effective search space: 1452921324
Effective search space used: 1452921324
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 111 (47.4 bits)