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Os07g0655400

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 8 (0.0183) R2 : 0.678
β1 : 1.98 (0.067) R2dD : 0.638 R2D : 0.468
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.582 (0.0391) R2dN8 : 0.21 R2N8 : 0.0398
σ : 0.344
deviance : 54.05
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = atmosphere, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
41.96 0.304 8.04 1.71 0.337 -0.421 -0.232 0.799 0.471 17.1 1011 4154 -- --
42.5 0.304 8.03 1.69 0.323 -0.499 -0.171 -- 0.438 17.2 1012 26365 -- --
42.09 0.302 8.04 1.71 0.336 -0.42 -- 0.778 0.471 17.1 1011 4151 -- --
41.81 0.301 8.04 1.5 0.392 -0.621 -- -- 0.431 17.1 1015 26315 -- --
47.95 0.323 8.03 1.7 -- -0.379 -- 0.758 0.469 -- 1011 4264 -- --
48.82 0.328 8 1.99 0.316 -- -0.0977 -- 0.59 17.1 -- -- -- --
48.84 0.327 8 1.99 0.315 -- -- -- 0.59 17.1 -- -- -- --
47.21 0.32 8.04 1.48 -- -0.605 -- -- 0.411 -- 1016 26407 -- --
68.18 0.385 8.14 -- 0.322 -1.51 -- -- -0.00392 17 1012 47520 -- --
54.05 0.344 8 1.98 -- -- -- -- 0.582 -- -- -- -- --
153.14 0.579 8.05 -- 0.281 -- -- -- 0.368 17.4 -- -- -- --
73.65 0.4 8.13 -- -- -1.5 -- -- -0.00763 -- 1012 47520 -- --
157.25 0.585 8.05 -- -- -- -- -- 0.362 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 41.20 humidity 80 43200 > th dose independent rect. 7 1
2 41.58 humidity 50 43200 < th dose dependent rect. 14 20
3 41.59 humidity 50 43200 < th dose dependent sin 12 NA
4 41.60 wind 1 43200 > th dose independent rect. 7 1
5 41.61 atmosphere 1010 4320 > th dose dependent rect. 23 2
6 41.61 humidity 50 43200 < th dose dependent rect. 14 22
10 41.65 wind 7 14400 > th dose independent rect. 5 1
17 41.68 atmosphere 1010 4320 > th dose dependent rect. 21 9
20 41.69 atmosphere 1010 4320 > th dose dependent rect. 21 12
41 41.73 humidity 50 43200 < th dose dependent rect. 14 4
48 41.74 humidity 60 14400 > th dose independent rect. 19 1
78 41.79 humidity 50 43200 < th dose dependent sin 10 NA
79 41.79 atmosphere 1010 4320 > th dose dependent sin 9 NA
89 41.81 humidity 60 14400 < th dose independent rect. 19 2
102 41.83 wind 7 14400 < th dose independent rect. 5 1
109 41.84 atmosphere 1010 4320 > th dose dependent rect. 4 1
121 41.85 atmosphere 1015 4320 > th dose independent rect. 21 9
133 41.86 wind 1 43200 < th dose independent rect. 18 8
141 41.87 atmosphere 1015 4320 < th dose independent rect. 21 9
149 41.88 atmosphere 1015 4320 > th dose independent rect. 22 3
152 41.88 humidity 60 43200 > th dose dependent rect. 7 3
158 41.89 atmosphere 1015 4320 < th dose independent rect. 22 3
170 41.90 wind 1 43200 < th dose independent rect. 7 1
173 41.90 atmosphere 1010 4320 > th dose dependent rect. 3 6
186 41.91 humidity 50 43200 < th dose dependent rect. 17 19
219 41.95 humidity 80 43200 < th dose independent rect. 6 4
225 41.95 humidity 60 43200 > th dose dependent rect. 8 1
237 41.96 wind 1 43200 < th dose independent rect. 23 2
242 41.96 humidity 60 14400 < th dose dependent rect. 19 12
246 41.97 humidity 60 14400 < th dose dependent rect. 19 3
261 41.98 humidity 50 43200 > th dose dependent rect. 12 1
272 41.99 humidity 80 43200 < th dose independent rect. 7 2
276 41.99 humidity 50 43200 < th dose dependent rect. 5 7
280 41.99 humidity 50 43200 < th dose dependent rect. 20 16
290 42.00 humidity 50 43200 < th dose independent rect. 17 19
292 42.00 atmosphere 1010 4320 > th dose dependent rect. 8 1
312 42.01 humidity 80 43200 > th dose independent rect. 17 6
315 42.01 humidity 50 43200 < th dose dependent rect. 15 1
324 42.02 humidity 50 43200 < th dose independent sin 9 NA
328 42.02 humidity 60 14400 > th dose independent rect. 19 10
340 42.03 humidity 50 43200 > th dose independent rect. 18 17
349 42.04 humidity 60 14400 > th dose independent rect. 19 5
370 42.05 humidity 70 43200 < th dose independent rect. 12 1
371 42.05 humidity 80 43200 > th dose independent rect. 18 4
372 42.05 wind 1 43200 > th dose independent rect. 18 8
389 42.06 humidity 50 43200 < th dose dependent rect. 6 12
425 42.07 wind 1 43200 > th dose independent rect. 23 1
427 42.07 humidity 50 43200 < th dose dependent no NA NA
500 42.08 humidity 50 43200 > th dose independent rect. 17 19
523 42.09 atmosphere 1010 4320 > th dose dependent no NA NA
545 42.09 humidity 50 43200 < th dose dependent rect. 11 23
548 42.10 humidity 50 43200 < th dose independent rect. 14 23
557 42.10 atmosphere 1010 4320 > th dose dependent rect. 3 23
559 42.10 atmosphere 1010 4320 > th dose dependent rect. 7 23
591 42.12 wind 7 43200 > th dose dependent rect. 14 1
592 42.12 humidity 50 43200 > th dose dependent rect. 7 6
597 42.12 wind 7 43200 > th dose dependent rect. 11 10
613 42.12 atmosphere 1010 4320 > th dose dependent rect. 1 23
623 42.13 humidity 50 43200 > th dose dependent rect. 17 2
649 42.14 humidity 80 43200 > th dose independent rect. 6 4
652 42.14 humidity 50 43200 > th dose independent rect. 6 5
654 42.14 humidity 50 43200 < th dose independent rect. 6 6
659 42.14 humidity 50 43200 > th dose independent rect. 1 10
665 42.14 humidity 60 14400 < th dose independent rect. 19 14
692 42.15 humidity 60 14400 > th dose independent rect. 19 7
723 42.16 humidity 50 43200 > th dose independent sin 9 NA
735 42.16 wind 7 43200 > th dose dependent rect. 13 8
757 42.17 wind 9 43200 > th dose independent rect. 14 7
794 42.18 humidity 50 43200 > th dose dependent rect. 6 12
802 42.19 wind 9 43200 < th dose independent rect. 14 7
805 42.19 humidity 50 43200 > th dose independent rect. 16 21
806 42.19 wind 1 43200 < th dose dependent rect. 23 2
810 42.19 humidity 50 43200 > th dose dependent rect. 7 10
831 42.20 humidity 50 43200 > th dose independent rect. 14 23
838 42.20 humidity 60 43200 > th dose dependent rect. 16 5
878 42.22 humidity 50 43200 > th dose independent rect. 9 1
879 42.22 wind 7 43200 > th dose independent rect. 13 2
880 42.22 wind 7 43200 > th dose independent rect. 12 4
893 42.22 humidity 50 43200 > th dose dependent rect. 12 8
906 42.23 wind 7 43200 < th dose independent rect. 13 2
912 42.23 humidity 50 43200 < th dose independent rect. 8 11