Os07g0650600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : BLE2 protein.
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Os07g0650600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : BLE2 protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = atmosphere,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 58.09 | 0.358 | 12.8 | -0.0203 | 0.566 | 0.577 | -0.0253 | 0.6 | 0.309 | 5.46 | 1001 | 4352 | -- | -- |
| 58.28 | 0.356 | 12.7 | 0.00937 | 0.565 | 0.627 | -0.0378 | -- | 0.305 | 5.46 | 1000 | 4733 | -- | -- |
| 57.98 | 0.355 | 12.8 | -0.0215 | 0.567 | 0.619 | -- | 0.707 | 0.309 | 5.44 | 1001 | 4805 | -- | -- |
| 58.27 | 0.356 | 12.7 | 0.00564 | 0.562 | 0.62 | -- | -- | 0.304 | 5.49 | 1000 | 4894 | -- | -- |
| 74.63 | 0.402 | 12.8 | -0.00141 | -- | 0.621 | -- | 0.666 | 0.321 | -- | 1001 | 4727 | -- | -- |
| 68.75 | 0.389 | 12.7 | -0.0968 | 0.568 | -- | -0.0324 | -- | 0.366 | 5.45 | -- | -- | -- | -- |
| 68.76 | 0.388 | 12.7 | -0.0969 | 0.568 | -- | -- | -- | 0.366 | 5.44 | -- | -- | -- | -- |
| 74.91 | 0.403 | 12.8 | 0.0315 | -- | 0.637 | -- | -- | 0.322 | -- | 1000 | 4677 | -- | -- |
| 58.27 | 0.356 | 12.7 | -- | 0.566 | 0.619 | -- | -- | 0.307 | 5.45 | 1000 | 4894 | -- | -- |
| 85.55 | 0.432 | 12.7 | -0.0779 | -- | -- | -- | -- | 0.38 | -- | -- | -- | -- | -- |
| 69 | 0.389 | 12.7 | -- | 0.566 | -- | -- | -- | 0.377 | 5.45 | -- | -- | -- | -- |
| 74.93 | 0.403 | 12.8 | -- | -- | 0.631 | -- | -- | 0.318 | -- | 1000 | 4677 | -- | -- |
| 85.71 | 0.432 | 12.7 | -- | -- | -- | -- | -- | 0.389 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 48.99 | wind | 1.0 | 43200 | > th | dose independent | rect. | 2 | 3 |
| 2 | 49.02 | wind | 1.0 | 43200 | < th | dose independent | rect. | 2 | 3 |
| 3 | 49.71 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 1 | 7 |
| 5 | 49.87 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 3 | 4 |
| 11 | 50.21 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 2 | 3 |
| 16 | 50.59 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 4 | 3 |
| 20 | 50.72 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 24 | 8 |
| 28 | 50.88 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 24 | 2 |
| 43 | 51.10 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 2 | 5 |
| 44 | 51.10 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 3 | 5 |
| 66 | 51.48 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 5 | 1 |
| 88 | 51.89 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 18 | 1 |
| 95 | 51.98 | humidity | 80.0 | 43200 | > th | dose dependent | rect. | 13 | 1 |
| 98 | 52.02 | temperature | 25.0 | 43200 | > th | dose independent | rect. | 9 | 2 |
| 107 | 52.11 | wind | 3.0 | 14400 | > th | dose independent | rect. | 13 | 1 |
| 108 | 52.11 | temperature | 25.0 | 43200 | < th | dose independent | rect. | 9 | 2 |
| 110 | 52.11 | humidity | 90.0 | 14400 | > th | dose dependent | sin | 9 | NA |
| 113 | 52.14 | humidity | 80.0 | 43200 | > th | dose dependent | rect. | 12 | 3 |
| 128 | 52.29 | wind | 3.0 | 14400 | < th | dose independent | rect. | 13 | 1 |
| 147 | 52.41 | wind | 7.0 | 14400 | < th | dose dependent | rect. | 14 | 1 |
| 155 | 52.44 | temperature | 20.0 | 43200 | > th | dose dependent | rect. | 10 | 1 |
| 167 | 52.52 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 14 | 1 |
| 174 | 52.55 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 24 | 8 |
| 187 | 52.61 | wind | 9.0 | 43200 | > th | dose independent | rect. | 18 | 1 |
| 193 | 52.62 | temperature | 30.0 | 43200 | < th | dose dependent | rect. | 10 | 1 |
| 244 | 52.75 | humidity | 90.0 | 14400 | > th | dose independent | sin | 9 | NA |
| 254 | 52.76 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 5 | 12 |
| 262 | 52.76 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 5 | 12 |
| 265 | 52.77 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 5 | 12 |
| 269 | 52.77 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 4 | 12 |
| 286 | 52.81 | radiation | 20.0 | 14400 | > th | dose independent | rect. | 6 | 2 |
| 335 | 52.85 | humidity | 80.0 | 43200 | > th | dose dependent | rect. | 8 | 7 |
| 343 | 52.87 | humidity | 80.0 | 43200 | > th | dose dependent | rect. | 9 | 1 |
| 377 | 52.91 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 5 | 1 |
| 413 | 52.95 | temperature | 30.0 | 43200 | < th | dose dependent | rect. | 13 | 1 |
| 425 | 52.96 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 5 | 9 |
| 476 | 53.02 | temperature | 25.0 | 43200 | > th | dose independent | rect. | 13 | 1 |
| 477 | 53.02 | radiation | 1.0 | 14400 | > th | dose independent | rect. | 18 | 1 |
| 510 | 53.04 | wind | 9.0 | 43200 | < th | dose independent | rect. | 18 | 1 |
| 517 | 53.04 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 13 | 3 |
| 524 | 53.05 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 13 | 3 |
| 533 | 53.06 | temperature | 25.0 | 43200 | > th | dose independent | sin | 1 | NA |
| 534 | 53.06 | temperature | 25.0 | 43200 | < th | dose independent | sin | 0 | NA |
| 548 | 53.07 | temperature | 25.0 | 43200 | < th | dose independent | rect. | 12 | 5 |
| 563 | 53.08 | temperature | 25.0 | 43200 | < th | dose independent | rect. | 13 | 1 |
| 576 | 53.09 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 13 | 3 |
| 583 | 53.09 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 13 | 3 |
| 606 | 53.11 | temperature | 25.0 | 43200 | < th | dose independent | rect. | 15 | 1 |
| 701 | 53.19 | temperature | 20.0 | 43200 | > th | dose dependent | sin | 1 | NA |
| 775 | 53.25 | radiation | 10.0 | 43200 | > th | dose independent | rect. | 13 | 1 |
| 802 | 53.27 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 7 | 7 |
| 928 | 53.36 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 2 | 5 |
| 934 | 53.36 | temperature | 30.0 | 43200 | < th | dose dependent | sin | 0 | NA |