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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os07g0642800

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 2.92 (0.0249) R2 : 0.0393
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.226 (0.0524) R2dN8 : 0.0507 R2N8 : 0.0393
σ : 0.468
deviance : 100.73
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
89.19 0.444 2.91 -0.0984 0.771 1.02 -2.33 -3.21 0.283 17.4 2.999 581 -- --
92.57 0.448 2.93 -0.0868 0.474 0.674 0.681 -- 0.248 16.6 0.01938 503 -- --
92.04 0.447 2.93 -0.0341 0.847 1.09 -- -0.958 0.26 18 0.0828 633 -- --
92.91 0.449 2.92 -0.11 0.824 1.05 -- -- 0.248 17.6 0.05815 610 -- --
93.87 0.451 2.92 -0.206 -- 0.234 -- -0.947 0.221 -- 21.66 345 -- --
94.54 0.456 2.93 -0.245 0.218 -- -0.713 -- 0.194 1.38 -- -- -- --
96.59 0.46 2.93 -0.221 0.22 -- -- -- 0.198 1.63 -- -- -- --
94.9 0.454 2.9 -0.0409 -- 0.671 -- -- 0.279 -- 0.05883 1612 -- --
93.2 0.45 2.93 -- 0.862 1.1 -- -- 0.24 17.5 7.531e-06 610 -- --
99.54 0.466 2.92 -0.212 -- -- -- -- 0.203 -- -- -- -- --
97.88 0.463 2.92 -- 0.216 -- -- -- 0.222 1.6 -- -- -- --
94.94 0.454 2.9 -- -- 0.632 -- -- 0.278 -- 2.241e-05 1616 -- --
100.73 0.468 2.92 -- -- -- -- -- 0.226 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 82.57 wind 1.0 10 < th dose dependent rect. 1 1
7 84.84 wind 1.0 10 < th dose independent rect. 1 1
8 84.93 humidity 90.0 720 > th dose independent rect. 12 1
9 84.93 radiation 1.0 720 < th dose independent rect. 12 1
10 84.93 humidity 90.0 720 > th dose dependent rect. 12 1
11 84.93 radiation 1.0 720 < th dose dependent rect. 12 1
40 86.20 atmosphere 1005.0 90 > th dose dependent rect. 1 1
55 86.96 humidity 80.0 720 < th dose independent rect. 12 2
58 87.08 atmosphere 1005.0 10 > th dose dependent rect. 1 2
68 87.40 temperature 25.0 270 > th dose independent rect. 1 1
70 87.52 temperature 25.0 270 > th dose independent rect. 24 3
72 87.61 wind 1.0 30 > th dose independent rect. 2 1
85 88.24 radiation 1.0 720 > th dose independent rect. 11 4
88 88.28 radiation 1.0 720 > th dose independent rect. 9 6
89 88.31 temperature 20.0 30 > th dose independent rect. 2 1
91 88.43 temperature 20.0 30 > th dose dependent rect. 2 1
97 88.63 atmosphere 1005.0 10 > th dose dependent rect. 1 4
99 88.67 temperature 20.0 10 < th dose independent rect. 2 1
106 88.71 temperature 25.0 90 > th dose dependent rect. 1 4
108 88.73 temperature 25.0 270 > th dose dependent rect. 1 1
110 88.76 radiation 1.0 720 > th dose independent rect. 11 6
125 88.93 atmosphere 1005.0 30 > th dose independent rect. 2 1
126 88.93 humidity 90.0 270 < th dose independent rect. 24 2
138 89.01 radiation 10.0 720 < th dose dependent rect. 11 8
140 89.02 temperature 10.0 30 > th dose independent rect. 2 1
142 89.02 temperature 30.0 30 < th dose independent rect. 2 1
143 89.02 humidity 50.0 30 > th dose independent rect. 2 1
147 89.02 atmosphere 1010.0 30 < th dose independent rect. 2 1
149 89.02 radiation 1.0 30 < th dose independent rect. 2 1
154 89.02 precipitation 0.1 30 < th dose independent rect. 2 1
157 89.02 temperature 10.0 30 > th dose independent rect. 3 23
159 89.02 radiation 1.0 30 < th dose dependent rect. 2 1
164 89.02 precipitation 0.1 30 < th dose dependent rect. 2 1
168 89.04 humidity 90.0 1440 < th dose dependent rect. 24 1
176 89.09 atmosphere 1015.0 30 < th dose dependent rect. 2 1
177 89.10 humidity 80.0 720 < th dose independent rect. 9 6
185 89.13 radiation 10.0 720 < th dose dependent rect. 11 16
189 89.15 temperature 25.0 270 > th dose independent rect. 23 9
200 89.22 atmosphere 1005.0 10 < th dose independent rect. 20 1
205 89.23 wind 9.0 30 < th dose dependent rect. 2 1
207 89.26 humidity 50.0 30 > th dose dependent rect. 2 1
214 89.30 humidity 80.0 1440 < th dose independent rect. 23 3
219 89.32 atmosphere 1005.0 10 < th dose independent rect. 18 4
220 89.33 temperature 25.0 10 < th dose dependent rect. 2 1
224 89.35 humidity 90.0 720 < th dose dependent rect. 12 1
228 89.38 radiation 1.0 720 < th dose independent rect. 9 10
229 89.38 humidity 80.0 1440 < th dose dependent rect. 23 3
239 89.43 humidity 80.0 1440 > th dose independent rect. 23 3
240 89.43 humidity 50.0 1440 > th dose dependent rect. 24 1
243 89.44 humidity 90.0 10 > th dose dependent rect. 24 2
246 89.46 humidity 80.0 1440 > th dose dependent rect. 24 1
260 89.53 radiation 1.0 720 < th dose independent rect. 9 18
280 89.63 humidity 80.0 1440 < th dose independent rect. 23 1
302 89.71 radiation 1.0 720 > th dose independent rect. 11 20
361 89.92 radiation 1.0 720 > th dose independent rect. 9 22
396 89.97 radiation 1.0 720 < th dose dependent rect. 23 20
397 89.98 humidity 80.0 720 > th dose independent rect. 9 6
411 90.03 radiation 1.0 720 > th dose dependent rect. 12 2
431 90.09 humidity 90.0 1440 < th dose independent rect. 1 1
433 90.09 precipitation 0.1 43200 > th dose independent rect. 24 21
434 90.09 precipitation 0.1 43200 < th dose independent rect. 24 21
440 90.09 precipitation 0.1 43200 < th dose dependent rect. 24 21
442 90.10 precipitation 0.1 43200 > th dose independent rect. 18 22
443 90.10 precipitation 0.1 43200 < th dose independent rect. 18 22
448 90.10 precipitation 0.1 43200 < th dose dependent rect. 18 22
451 90.11 precipitation 0.1 43200 < th dose independent rect. 18 13
457 90.11 precipitation 0.1 43200 < th dose dependent rect. 18 13
461 90.12 precipitation 0.1 43200 > th dose independent rect. 18 13
462 90.12 radiation 1.0 720 < th dose independent rect. 23 20
467 90.13 precipitation 0.1 43200 > th dose independent sin 11 NA
468 90.13 precipitation 0.1 43200 < th dose independent sin 11 NA
473 90.13 precipitation 0.1 43200 > th dose independent rect. 20 21
474 90.13 precipitation 0.1 43200 < th dose independent rect. 20 21
479 90.13 precipitation 0.1 43200 < th dose dependent sin 11 NA
483 90.13 precipitation 0.1 43200 < th dose dependent rect. 20 21
486 90.14 precipitation 0.1 43200 > th dose independent rect. 15 18
490 90.14 precipitation 0.1 43200 > th dose dependent rect. 20 20
494 90.15 precipitation 0.1 43200 < th dose independent rect. 15 18
499 90.15 precipitation 0.1 43200 < th dose dependent rect. 15 18
500 90.15 radiation 1.0 720 < th dose dependent rect. 21 22
503 90.16 precipitation 0.1 43200 < th dose independent rect. 1 3
508 90.16 precipitation 0.1 43200 > th dose independent rect. 13 20
518 90.16 precipitation 0.1 43200 < th dose dependent rect. 1 3
519 90.16 precipitation 0.1 43200 > th dose dependent rect. 18 14
527 90.17 precipitation 0.1 43200 > th dose independent rect. 18 15
528 90.17 precipitation 0.1 43200 < th dose independent rect. 18 15
541 90.17 precipitation 0.1 43200 < th dose dependent rect. 18 15
560 90.18 precipitation 0.1 43200 > th dose dependent rect. 20 11
635 90.22 precipitation 0.1 43200 < th dose independent rect. 20 11
648 90.22 precipitation 0.1 43200 < th dose dependent rect. 20 11
664 90.23 atmosphere 1005.0 10 > th dose independent rect. 14 11
666 90.23 precipitation 0.1 43200 > th dose independent rect. 20 11
728 90.24 precipitation 0.1 43200 > th dose dependent rect. 18 18
730 90.25 precipitation 0.1 43200 > th dose independent rect. 1 3
741 90.25 precipitation 0.1 43200 > th dose independent rect. 10 23
761 90.26 precipitation 0.1 43200 > th dose independent no NA NA
762 90.26 precipitation 0.1 43200 < th dose independent no NA NA
775 90.26 precipitation 0.1 43200 < th dose independent rect. 10 23
776 90.26 precipitation 0.1 43200 > th dose dependent sin 10 NA
777 90.26 precipitation 0.1 43200 < th dose dependent no NA NA
781 90.26 precipitation 0.1 43200 < th dose dependent rect. 10 23
882 90.31 precipitation 0.1 43200 > th dose independent rect. 1 1
883 90.31 precipitation 0.1 43200 < th dose independent rect. 1 1
891 90.31 precipitation 0.1 43200 > th dose independent rect. 3 23
893 90.31 precipitation 0.1 43200 < th dose independent rect. 3 23
894 90.31 precipitation 0.1 43200 > th dose dependent rect. 1 1
895 90.31 precipitation 0.1 43200 < th dose dependent rect. 1 1
900 90.31 precipitation 0.1 43200 < th dose dependent rect. 3 23
901 90.32 temperature 25.0 30 > th dose independent rect. 4 1
905 90.32 precipitation 0.1 43200 > th dose dependent rect. 1 3
918 90.33 humidity 90.0 270 < th dose dependent rect. 24 1
936 90.35 precipitation 0.1 43200 > th dose independent rect. 24 5
956 90.36 precipitation 0.1 43200 < th dose independent rect. 24 5
962 90.36 precipitation 0.1 43200 < th dose dependent rect. 24 5
987 90.37 temperature 25.0 90 > th dose dependent rect. 4 1
996 90.37 precipitation 0.1 43200 > th dose dependent rect. 24 5