Os07g0633600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os07g0633600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 503.41 | 1.05 | 7.94 | -4.84 | 0.251 | 2.84 | -1.99 | -6.68 | -0.606 | 17.1 | 28.18 | 1224 | -- | -- |
| 507.51 | 1.05 | 7.79 | -3.52 | 0.287 | 2.22 | -1.89 | -- | -0.517 | 17.4 | 27.47 | 1210 | -- | -- |
| 508.52 | 1.05 | 7.95 | -4.61 | 0.409 | 2.66 | -- | -5.62 | -0.582 | 20.2 | 28.22 | 1256 | -- | -- |
| 511.64 | 1.05 | 7.8 | -3.48 | 0.407 | 2.08 | -- | -- | -0.477 | 20.3 | 27.94 | 1234 | -- | -- |
| 516.34 | 1.06 | 7.92 | -4.66 | -- | 2.74 | -- | -5.62 | -0.646 | -- | 27.95 | 1221 | -- | -- |
| 699.64 | 1.24 | 7.82 | -2.84 | 0.571 | -- | 1.24 | -- | -0.598 | 23.8 | -- | -- | -- | -- |
| 704.14 | 1.24 | 7.83 | -2.88 | 0.603 | -- | -- | -- | -0.599 | 22.5 | -- | -- | -- | -- |
| 520.1 | 1.06 | 7.8 | -3.5 | -- | 2.17 | -- | -- | -0.533 | -- | 27.53 | 1196 | -- | -- |
| 807.31 | 1.32 | 7.7 | -- | 0.394 | 1.53 | -- | -- | 0.00361 | 21 | 31.48 | 1134 | -- | -- |
| 726.44 | 1.26 | 7.81 | -2.87 | -- | -- | -- | -- | -0.596 | -- | -- | -- | -- | -- |
| 922.67 | 1.42 | 7.76 | -- | 0.587 | -- | -- | -- | -0.278 | 22.2 | -- | -- | -- | -- |
| 817.79 | 1.33 | 7.67 | -- | -- | 1.58 | -- | -- | 0.0499 | -- | 31.11 | 1153 | -- | -- |
| 943.54 | 1.43 | 7.74 | -- | -- | -- | -- | -- | -0.278 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 504.64 | humidity | 70 | 1440 | < th | dose independent | rect. | 18 | 13 |
| 2 | 504.97 | humidity | 70 | 1440 | < th | dose independent | rect. | 18 | 2 |
| 13 | 506.80 | temperature | 30 | 1440 | > th | dose dependent | rect. | 18 | 15 |
| 14 | 506.81 | temperature | 25 | 720 | > th | dose dependent | rect. | 17 | 6 |
| 19 | 509.26 | temperature | 30 | 1440 | > th | dose dependent | rect. | 18 | 1 |
| 33 | 509.31 | radiation | 20 | 1440 | > th | dose independent | rect. | 16 | 15 |
| 67 | 514.27 | humidity | 70 | 1440 | < th | dose dependent | rect. | 18 | 2 |
| 84 | 516.03 | radiation | 20 | 1440 | > th | dose independent | rect. | 16 | 1 |
| 98 | 516.19 | radiation | 20 | 1440 | > th | dose dependent | rect. | 16 | 16 |
| 100 | 516.70 | humidity | 70 | 1440 | > th | dose independent | rect. | 18 | 9 |
| 101 | 516.72 | humidity | 70 | 1440 | > th | dose independent | rect. | 18 | 7 |
| 110 | 517.07 | humidity | 70 | 1440 | > th | dose independent | rect. | 18 | 3 |
| 111 | 517.07 | humidity | 70 | 1440 | > th | dose independent | rect. | 18 | 13 |
| 112 | 517.09 | temperature | 30 | 1440 | > th | dose dependent | sin | 12 | NA |
| 113 | 517.10 | humidity | 70 | 1440 | > th | dose independent | rect. | 18 | 5 |
| 119 | 517.54 | radiation | 20 | 1440 | < th | dose independent | rect. | 16 | 1 |
| 132 | 518.00 | temperature | 30 | 1440 | > th | dose independent | rect. | 17 | 2 |
| 175 | 518.36 | radiation | 20 | 1440 | < th | dose independent | rect. | 16 | 4 |
| 180 | 518.65 | radiation | 20 | 1440 | < th | dose independent | rect. | 16 | 12 |
| 185 | 518.81 | temperature | 30 | 1440 | < th | dose independent | sin | 11 | NA |
| 193 | 519.12 | radiation | 20 | 1440 | < th | dose independent | rect. | 16 | 9 |
| 209 | 519.21 | temperature | 30 | 1440 | > th | dose dependent | rect. | 15 | 4 |
| 225 | 519.32 | humidity | 70 | 720 | < th | dose independent | sin | 11 | NA |
| 231 | 519.39 | temperature | 30 | 1440 | < th | dose independent | rect. | 17 | 4 |
| 233 | 519.41 | temperature | 30 | 1440 | < th | dose independent | rect. | 17 | 6 |
| 237 | 519.45 | temperature | 30 | 1440 | < th | dose independent | rect. | 17 | 10 |
| 244 | 519.57 | temperature | 30 | 1440 | > th | dose independent | sin | 12 | NA |
| 276 | 519.92 | temperature | 30 | 1440 | > th | dose dependent | rect. | 17 | 18 |
| 282 | 520.00 | humidity | 50 | 1440 | < th | dose independent | rect. | 16 | 1 |
| 285 | 520.03 | temperature | 30 | 1440 | < th | dose independent | rect. | 17 | 15 |
| 330 | 520.39 | radiation | 20 | 1440 | < th | dose independent | rect. | 16 | 15 |
| 366 | 520.67 | humidity | 50 | 1440 | < th | dose dependent | rect. | 16 | 1 |
| 370 | 520.73 | humidity | 70 | 720 | > th | dose independent | sin | 12 | NA |
| 415 | 522.14 | temperature | 30 | 1440 | < th | dose independent | rect. | 17 | 19 |
| 454 | 522.87 | radiation | 1 | 720 | > th | dose independent | rect. | 18 | 11 |
| 485 | 523.53 | temperature | 30 | 1440 | < th | dose independent | rect. | 15 | 21 |
| 535 | 524.05 | temperature | 30 | 1440 | > th | dose dependent | no | NA | NA |
| 636 | 524.63 | temperature | 30 | 1440 | > th | dose independent | rect. | 17 | 18 |
| 653 | 524.92 | radiation | 30 | 1440 | > th | dose independent | rect. | 7 | 1 |
| 702 | 525.41 | humidity | 50 | 1440 | > th | dose independent | rect. | 16 | 1 |
| 713 | 526.00 | radiation | 20 | 1440 | < th | dose dependent | rect. | 18 | 9 |
| 718 | 526.26 | humidity | 70 | 720 | > th | dose independent | rect. | 17 | 16 |
| 720 | 526.31 | temperature | 30 | 1440 | > th | dose independent | rect. | 17 | 21 |
| 722 | 526.34 | humidity | 70 | 1440 | < th | dose dependent | sin | 12 | NA |
| 793 | 527.51 | radiation | 1 | 720 | > th | dose dependent | rect. | 18 | 11 |
| 843 | 528.21 | radiation | 1 | 720 | > th | dose independent | rect. | 18 | 1 |
| 895 | 528.92 | radiation | 30 | 1440 | < th | dose independent | rect. | 7 | 1 |
| 938 | 529.71 | radiation | 10 | 1440 | < th | dose dependent | rect. | 18 | 7 |
| 990 | 530.27 | temperature | 30 | 1440 | > th | dose independent | rect. | 9 | 10 |