Os07g0632700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : emp24/gp25L/p24 family protein.
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Os07g0632700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : emp24/gp25L/p24 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 18.12 | 0.2 | 12.1 | 1.17 | 0.42 | 0.48 | 0.119 | 0.0172 | 0.303 | 1.41 | 29 | 3539 | -- | -- |
| 18.12 | 0.198 | 12.1 | 1.17 | 0.42 | 0.48 | 0.119 | -- | 0.303 | 1.41 | 29 | 3539 | -- | -- |
| 18.17 | 0.199 | 12.1 | 1.18 | 0.42 | 0.483 | -- | -0.0232 | 0.304 | 1.41 | 28.97 | 3539 | -- | -- |
| 18.17 | 0.199 | 12.1 | 1.17 | 0.42 | 0.48 | -- | -- | 0.303 | 1.41 | 28.94 | 3541 | -- | -- |
| 26.31 | 0.24 | 12.1 | 1.08 | -- | 0.3 | -- | 0.364 | 0.301 | -- | 28.97 | 3539 | -- | -- |
| 24.67 | 0.233 | 12.1 | 1.05 | 0.379 | -- | 0.0697 | -- | 0.282 | 1.64 | -- | -- | -- | -- |
| 24.69 | 0.233 | 12.1 | 1.05 | 0.379 | -- | -- | -- | 0.281 | 1.63 | -- | -- | -- | -- |
| 26.5 | 0.241 | 12.1 | 1.13 | -- | 0.32 | -- | -- | 0.314 | -- | 28.97 | 3539 | -- | -- |
| 51.95 | 0.336 | 12.2 | -- | 0.41 | 0.183 | -- | -- | 0.124 | 1.6 | 30.8 | 5030 | -- | -- |
| 33.45 | 0.27 | 12.1 | 1.06 | -- | -- | -- | -- | 0.29 | -- | -- | -- | -- | -- |
| 53.5 | 0.342 | 12.2 | -- | 0.398 | -- | -- | -- | 0.165 | 1.72 | -- | -- | -- | -- |
| 59.4 | 0.36 | 12.2 | -- | -- | 0.232 | -- | -- | 0.185 | -- | 28.97 | 3539 | -- | -- |
| 63.13 | 0.371 | 12.2 | -- | -- | -- | -- | -- | 0.172 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 17.28 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 19 | 10 |
| 8 | 17.40 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 17 | 14 |
| 9 | 17.44 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 19 | 6 |
| 16 | 17.51 | wind | 5.0 | 43200 | > th | dose independent | rect. | 20 | 1 |
| 17 | 17.54 | wind | 9.0 | 43200 | < th | dose independent | rect. | 19 | 2 |
| 18 | 17.55 | wind | 9.0 | 43200 | > th | dose independent | rect. | 19 | 2 |
| 20 | 17.57 | wind | 5.0 | 43200 | < th | dose independent | rect. | 20 | 1 |
| 27 | 17.69 | temperature | 20.0 | 4320 | > th | dose dependent | rect. | 24 | 1 |
| 28 | 17.70 | wind | 9.0 | 43200 | > th | dose independent | rect. | 19 | 6 |
| 32 | 17.73 | wind | 9.0 | 43200 | > th | dose independent | rect. | 19 | 9 |
| 33 | 17.73 | temperature | 20.0 | 4320 | > th | dose dependent | rect. | 24 | 4 |
| 36 | 17.75 | temperature | 20.0 | 4320 | > th | dose dependent | rect. | 3 | 1 |
| 42 | 17.76 | temperature | 20.0 | 4320 | > th | dose dependent | rect. | 19 | 9 |
| 43 | 17.77 | wind | 9.0 | 43200 | < th | dose independent | rect. | 18 | 12 |
| 46 | 17.77 | temperature | 20.0 | 4320 | > th | dose dependent | rect. | 21 | 7 |
| 50 | 17.78 | temperature | 25.0 | 4320 | > th | dose independent | rect. | 19 | 1 |
| 51 | 17.78 | temperature | 30.0 | 4320 | < th | dose dependent | rect. | 18 | 1 |
| 79 | 17.81 | temperature | 10.0 | 4320 | > th | dose dependent | rect. | 18 | 1 |
| 89 | 17.83 | temperature | 25.0 | 4320 | < th | dose independent | rect. | 19 | 1 |
| 97 | 17.84 | temperature | 20.0 | 4320 | > th | dose dependent | rect. | 20 | 1 |
| 98 | 17.84 | temperature | 20.0 | 4320 | > th | dose dependent | rect. | 19 | 3 |
| 108 | 17.85 | temperature | 30.0 | 4320 | < th | dose dependent | rect. | 18 | 4 |
| 126 | 17.86 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 17 | 8 |
| 127 | 17.86 | temperature | 10.0 | 4320 | > th | dose dependent | rect. | 17 | 9 |
| 137 | 17.87 | temperature | 30.0 | 4320 | < th | dose dependent | rect. | 17 | 8 |
| 201 | 17.93 | temperature | 25.0 | 4320 | > th | dose independent | rect. | 18 | 15 |
| 216 | 17.94 | temperature | 20.0 | 4320 | > th | dose dependent | sin | 11 | NA |
| 228 | 17.95 | wind | 9.0 | 43200 | < th | dose independent | rect. | 19 | 6 |
| 245 | 17.96 | wind | 9.0 | 43200 | < th | dose independent | rect. | 19 | 9 |
| 287 | 17.99 | temperature | 25.0 | 4320 | < th | dose independent | rect. | 18 | 15 |
| 298 | 18.00 | temperature | 25.0 | 4320 | > th | dose independent | rect. | 18 | 6 |
| 299 | 18.00 | temperature | 25.0 | 4320 | > th | dose independent | rect. | 18 | 8 |
| 315 | 18.01 | temperature | 25.0 | 4320 | > th | dose independent | rect. | 6 | 2 |
| 339 | 18.02 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 20 | 1 |
| 346 | 18.03 | atmosphere | 995.0 | 43200 | > th | dose independent | rect. | 12 | 1 |
| 352 | 18.03 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 17 | 4 |
| 415 | 18.06 | temperature | 25.0 | 4320 | < th | dose independent | rect. | 18 | 7 |
| 431 | 18.07 | temperature | 25.0 | 4320 | < th | dose independent | rect. | 6 | 2 |
| 460 | 18.08 | temperature | 10.0 | 4320 | > th | dose dependent | sin | 14 | NA |
| 645 | 18.16 | temperature | 30.0 | 4320 | < th | dose dependent | sin | 13 | NA |
| 712 | 18.19 | temperature | 25.0 | 4320 | > th | dose independent | sin | 11 | NA |
| 719 | 18.19 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 17 | 2 |
| 802 | 18.22 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 17 | 4 |
| 820 | 18.23 | temperature | 10.0 | 4320 | > th | dose dependent | rect. | 24 | 1 |
| 850 | 18.24 | humidity | 80.0 | 43200 | > th | dose dependent | rect. | 21 | 1 |
| 894 | 18.26 | temperature | 25.0 | 4320 | > th | dose dependent | rect. | 7 | 1 |
| 896 | 18.26 | temperature | 30.0 | 4320 | < th | dose dependent | rect. | 24 | 1 |
| 927 | 18.27 | temperature | 25.0 | 4320 | < th | dose independent | sin | 11 | NA |
| 996 | 18.29 | temperature | 25.0 | 720 | > th | dose dependent | sin | 9 | NA |