Os07g0626800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Amine oxidase domain containing protein.
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Os07g0626800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Amine oxidase domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = atmosphere,
response mode = > th, dose dependency = dose independent, type of G = rect.)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 161.64 | 0.597 | 12.5 | -1.77 | 2.86 | -0.818 | 0.833 | -1.26 | -0.791 | 19.4 | 1000 | 89 | 4.95 | 17.8 |
| 169.19 | 0.606 | 12.5 | -1.81 | 2.84 | -0.842 | 0.81 | -- | -0.793 | 19.3 | 1000 | 88 | 4.96 | 17.7 |
| 163.33 | 0.595 | 12.5 | -1.78 | 2.86 | -0.825 | -- | -1.26 | -0.793 | 19.4 | 1000 | 104 | 4.83 | 17.7 |
| 168.73 | 0.605 | 12.5 | -1.84 | 2.86 | -0.933 | -- | -- | -0.774 | 19.2 | 1001 | 151 | 4.48 | 17.3 |
| 542.19 | 1.09 | 12.4 | -1.79 | -- | -0.81 | -- | -0.916 | -0.828 | -- | 1002 | 6 | 4.53 | 18.2 |
| 199.55 | 0.662 | 12.5 | -1.68 | 2.73 | -- | 0.957 | -- | -0.904 | 20.4 | -- | -- | -- | -- |
| 202.41 | 0.666 | 12.5 | -1.71 | 2.73 | -- | -- | -- | -0.903 | 20.3 | -- | -- | -- | -- |
| 245.32 | 0.729 | 12.6 | -1.77 | -- | -2.04 | -- | -- | -1.16 | -- | 1002 | 136 | 3.37 | 8.23 |
| 255.91 | 0.745 | 12.5 | -- | 2.69 | -0.69 | -- | -- | -0.675 | 19.5 | 1001 | 104 | 4.63 | 17.2 |
| 615.69 | 1.16 | 12.5 | -1.73 | -- | -- | -- | -- | -0.932 | -- | -- | -- | -- | -- |
| 279.54 | 0.782 | 12.5 | -- | 2.74 | -- | -- | -- | -0.713 | 20.3 | -- | -- | -- | -- |
| 307.23 | 0.816 | 12.5 | -- | -- | -2.3 | -- | -- | -0.719 | -- | 1001 | 307 | 1.97 | 8.4 |
| 694.39 | 1.23 | 12.4 | -- | -- | -- | -- | -- | -0.741 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 162.47 | atmosphere | 1000.0 | 90 | > th | dose independent | rect. | 5 | 17 |
| 14 | 167.67 | atmosphere | 995.0 | 90 | > th | dose dependent | rect. | 5 | 17 |
| 15 | 168.24 | radiation | 20.0 | 270 | < th | dose independent | rect. | 3 | 8 |
| 18 | 169.02 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 3 | 9 |
| 38 | 171.27 | radiation | 40.0 | 90 | < th | dose independent | rect. | 5 | 18 |
| 79 | 173.57 | radiation | 40.0 | 270 | < th | dose independent | rect. | 3 | 18 |
| 92 | 173.79 | temperature | 25.0 | 270 | < th | dose independent | rect. | 3 | 7 |
| 125 | 174.74 | atmosphere | 1000.0 | 10 | > th | dose independent | rect. | 7 | 23 |
| 132 | 174.93 | atmosphere | 1000.0 | 10 | > th | dose independent | sin | 22 | NA |
| 147 | 175.32 | wind | 1.0 | 43200 | > th | dose independent | rect. | 10 | 1 |
| 172 | 175.73 | wind | 1.0 | 43200 | < th | dose independent | rect. | 10 | 1 |
| 179 | 175.81 | wind | 3.0 | 14400 | < th | dose independent | rect. | 10 | 5 |
| 181 | 175.87 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 3 | 18 |
| 182 | 175.90 | wind | 3.0 | 14400 | > th | dose independent | rect. | 10 | 5 |
| 203 | 176.23 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 4 | 16 |
| 212 | 176.40 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 13 | 1 |
| 237 | 176.81 | atmosphere | 1000.0 | 10 | < th | dose independent | rect. | 9 | 19 |
| 241 | 176.87 | atmosphere | 1005.0 | 270 | < th | dose dependent | rect. | 8 | 6 |
| 244 | 176.91 | atmosphere | 1000.0 | 10 | < th | dose independent | rect. | 9 | 7 |
| 258 | 177.04 | atmosphere | 1015.0 | 270 | < th | dose dependent | rect. | 7 | 8 |
| 303 | 177.47 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 10 | 2 |
| 305 | 177.49 | atmosphere | 1000.0 | 30 | > th | dose independent | rect. | 5 | 9 |
| 306 | 177.49 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 3 | 8 |
| 315 | 177.62 | temperature | 25.0 | 270 | > th | dose dependent | sin | 7 | NA |
| 318 | 177.64 | temperature | 25.0 | 270 | > th | dose dependent | rect. | 22 | 15 |
| 324 | 177.73 | radiation | 40.0 | 270 | < th | dose independent | sin | 5 | NA |
| 365 | 177.97 | atmosphere | 995.0 | 270 | > th | dose dependent | rect. | 3 | 7 |
| 376 | 178.03 | radiation | 40.0 | 10 | < th | dose independent | rect. | 5 | 18 |
| 392 | 178.12 | wind | 5.0 | 14400 | < th | dose dependent | rect. | 11 | 4 |
| 396 | 178.14 | humidity | 80.0 | 14400 | < th | dose dependent | rect. | 19 | 10 |
| 408 | 178.20 | atmosphere | 1015.0 | 90 | < th | dose dependent | rect. | 23 | 17 |
| 413 | 178.22 | atmosphere | 1000.0 | 10 | < th | dose independent | sin | 22 | NA |
| 474 | 178.61 | temperature | 30.0 | 90 | < th | dose independent | sin | 4 | NA |
| 494 | 178.73 | wind | 3.0 | 14400 | < th | dose independent | rect. | 13 | 1 |
| 497 | 178.75 | atmosphere | 1005.0 | 10 | < th | dose dependent | rect. | 9 | 7 |
| 500 | 178.77 | atmosphere | 1000.0 | 10 | < th | dose independent | rect. | 6 | 22 |
| 501 | 178.77 | atmosphere | 1000.0 | 10 | > th | dose independent | rect. | 17 | 23 |
| 513 | 178.81 | radiation | 40.0 | 270 | < th | dose dependent | sin | 2 | NA |
| 518 | 178.83 | radiation | 30.0 | 270 | > th | dose dependent | sin | 8 | NA |
| 559 | 178.99 | wind | 3.0 | 14400 | > th | dose independent | rect. | 13 | 1 |
| 576 | 179.06 | atmosphere | 1000.0 | 10 | > th | dose independent | rect. | 1 | 23 |
| 598 | 179.13 | atmosphere | 1000.0 | 10 | < th | dose independent | rect. | 22 | 20 |
| 617 | 179.21 | temperature | 25.0 | 270 | > th | dose dependent | rect. | 9 | 1 |
| 623 | 179.22 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 22 | 16 |
| 637 | 179.27 | atmosphere | 1000.0 | 30 | > th | dose independent | rect. | 21 | 23 |
| 656 | 179.32 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 2 | 5 |
| 661 | 179.33 | radiation | 30.0 | 270 | > th | dose dependent | rect. | 14 | 22 |
| 702 | 179.46 | temperature | 25.0 | 270 | > th | dose dependent | rect. | 7 | 6 |
| 709 | 179.47 | atmosphere | 1000.0 | 10 | < th | dose independent | rect. | 9 | 15 |
| 728 | 179.53 | atmosphere | 1000.0 | 30 | > th | dose independent | rect. | 15 | 23 |
| 754 | 179.60 | atmosphere | 1000.0 | 30 | > th | dose independent | rect. | 9 | 13 |
| 755 | 179.60 | temperature | 30.0 | 90 | < th | dose independent | rect. | 5 | 17 |
| 759 | 179.62 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 16 | 4 |
| 766 | 179.64 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 16 | 4 |
| 768 | 179.64 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 16 | 4 |
| 797 | 179.71 | atmosphere | 1000.0 | 10 | < th | dose independent | rect. | 20 | 22 |
| 803 | 179.73 | radiation | 30.0 | 270 | > th | dose dependent | rect. | 7 | 5 |
| 820 | 179.74 | radiation | 30.0 | 10 | < th | dose independent | rect. | 5 | 8 |
| 823 | 179.74 | radiation | 40.0 | 270 | > th | dose dependent | rect. | 9 | 2 |
| 860 | 179.79 | atmosphere | 1000.0 | 10 | < th | dose independent | rect. | 1 | 23 |
| 883 | 179.81 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 22 | 16 |
| 921 | 179.88 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 22 | 12 |
| 925 | 179.89 | wind | 5.0 | 90 | < th | dose independent | rect. | 22 | 7 |
| 926 | 179.89 | wind | 3.0 | 30 | < th | dose independent | rect. | 5 | 8 |
| 929 | 179.89 | temperature | 30.0 | 14400 | > th | dose dependent | rect. | 8 | 1 |
| 951 | 179.90 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 14 | 6 |
| 957 | 179.92 | atmosphere | 1000.0 | 10 | > th | dose independent | no | NA | NA |
| 959 | 179.92 | atmosphere | 1000.0 | 10 | < th | dose independent | no | NA | NA |
| 978 | 179.95 | atmosphere | 1000.0 | 10 | < th | dose independent | rect. | 11 | 23 |
| 979 | 179.95 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 11 | 9 |
| 985 | 179.97 | temperature | 30.0 | 14400 | > th | dose independent | rect. | 8 | 1 |