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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os07g0619600

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Ankyrin repeat containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 3.2 (0.0308) R2 : 0.0169
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.181 (0.0648) R2dN8 : 0.0218 R2N8 : 0.0169
σ : 0.58
deviance : 154.39
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = wind, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
140.79 0.557 3.16 0.205 0.233 -0.636 0.855 -1.16 0.321 14.3 10.64 4211 -- --
141.04 0.553 3.17 0.265 0.227 -0.538 0.84 -- 0.32 14.4 10.7 4202 -- --
143.2 0.557 3.16 0.215 0.243 -0.671 -- -1.25 0.318 13.4 10.67 4201 -- --
143.37 0.558 3.16 0.284 0.236 -0.572 -- -- 0.331 13.2 10.7 4206 -- --
146.55 0.564 3.16 0.239 -- -0.582 -- -0.818 0.32 -- 10.68 4200 -- --
146.77 0.568 3.19 0.295 0.205 -- 0.907 -- 0.215 15.2 -- -- -- --
149.45 0.572 3.19 0.313 0.208 -- -- -- 0.221 15 -- -- -- --
146.68 0.564 3.17 0.276 -- -0.511 -- -- 0.316 -- 10.7 4188 -- --
145.48 0.562 3.17 -- 0.23 -0.595 -- -- 0.305 13.1 10.7 4201 -- --
151.95 0.576 3.19 0.304 -- -- -- -- 0.215 -- -- -- -- --
152.04 0.577 3.2 -- 0.202 -- -- -- 0.186 15 -- -- -- --
148.68 0.568 3.17 -- -- -0.528 -- -- 0.288 -- 10.67 4196 -- --
154.39 0.58 3.2 -- -- -- -- -- 0.181 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 134.84 temperature 10.0 1440 > th dose independent rect. 1 1
4 134.84 temperature 30.0 1440 < th dose independent rect. 1 1
8 134.84 humidity 50.0 1440 > th dose independent rect. 1 1
18 134.84 atmosphere 995.0 1440 > th dose independent rect. 1 1
19 134.84 radiation 1.0 1440 < th dose independent rect. 1 1
39 134.84 temperature 10.0 1440 > th dose independent rect. 2 23
42 134.84 radiation 1.0 1440 < th dose dependent rect. 1 1
48 134.99 humidity 90.0 30 < th dose independent rect. 24 1
50 135.16 temperature 25.0 30 > th dose independent rect. 24 1
51 135.19 humidity 90.0 30 < th dose dependent rect. 24 1
52 135.24 wind 1.0 30 > th dose independent rect. 24 1
53 135.27 atmosphere 1005.0 30 > th dose independent rect. 24 1
54 135.27 temperature 10.0 30 > th dose dependent rect. 24 1
56 135.30 atmosphere 995.0 30 > th dose dependent rect. 24 1
57 135.35 wind 3.0 30 < th dose independent rect. 24 1
60 135.39 wind 7.0 30 < th dose independent rect. 24 1
62 135.39 temperature 10.0 30 > th dose independent rect. 24 1
63 135.39 temperature 30.0 30 < th dose independent rect. 24 1
64 135.39 humidity 50.0 30 > th dose independent rect. 24 1
67 135.39 atmosphere 995.0 30 > th dose independent rect. 24 1
68 135.39 radiation 1.0 30 < th dose independent rect. 24 1
73 135.39 precipitation 0.1 30 < th dose independent rect. 24 1
74 135.39 temperature 10.0 30 > th dose independent rect. 1 23
77 135.39 radiation 1.0 30 < th dose dependent rect. 24 1
82 135.39 precipitation 0.1 30 < th dose dependent rect. 24 1
87 135.54 wind 9.0 30 < th dose dependent rect. 24 1
89 135.64 atmosphere 1010.0 30 < th dose independent rect. 24 1
92 135.70 humidity 50.0 30 > th dose dependent rect. 24 1
99 136.51 wind 1.0 30 > th dose dependent rect. 24 1
100 136.59 atmosphere 1015.0 30 < th dose dependent rect. 24 1
103 137.10 wind 7.0 90 < th dose dependent rect. 12 5
104 137.21 wind 7.0 270 < th dose dependent rect. 12 2
109 137.42 temperature 30.0 30 < th dose dependent rect. 24 1
115 137.71 atmosphere 1000.0 10 < th dose independent rect. 5 1
123 137.71 atmosphere 1000.0 10 < th dose dependent rect. 5 1
137 137.75 temperature 25.0 90 > th dose independent rect. 4 1
150 137.94 temperature 25.0 10 > th dose independent rect. 24 5
155 138.03 wind 9.0 30 < th dose independent rect. 1 23
156 138.05 temperature 25.0 90 > th dose dependent rect. 4 1
157 138.07 wind 5.0 90 < th dose independent rect. 12 5
159 138.12 wind 1.0 30 > th dose dependent rect. 4 1
164 138.21 temperature 10.0 90 > th dose dependent rect. 5 7
167 138.24 humidity 90.0 10 < th dose independent rect. 4 1
171 138.27 humidity 90.0 10 < th dose independent rect. 24 5
177 138.32 wind 3.0 270 < th dose independent rect. 12 2
189 138.47 wind 1.0 90 > th dose independent rect. 5 7
198 138.55 wind 5.0 10 < th dose independent rect. 12 4
218 138.79 humidity 50.0 270 > th dose independent rect. 11 4
220 138.80 atmosphere 995.0 270 > th dose independent rect. 11 4
227 138.87 humidity 50.0 270 > th dose independent rect. 12 2
229 138.90 temperature 10.0 270 > th dose independent rect. 11 4
230 138.90 atmosphere 1015.0 270 < th dose independent rect. 11 4
232 138.90 temperature 10.0 270 > th dose independent rect. 15 20
235 138.91 humidity 50.0 270 > th dose dependent rect. 12 1
246 138.98 wind 9.0 270 < th dose independent rect. 15 20
250 139.01 wind 1.0 270 > th dose independent rect. 5 16
256 139.04 precipitation 0.1 270 < th dose independent rect. 11 4
257 139.04 precipitation 0.1 270 < th dose dependent rect. 11 4
261 139.07 wind 7.0 1440 < th dose independent rect. 1 1
278 139.16 radiation 1.0 270 > th dose independent rect. 11 4
279 139.16 temperature 20.0 30 > th dose independent rect. 6 6
321 139.29 wind 7.0 30 < th dose independent rect. 12 18
331 139.32 temperature 10.0 270 > th dose independent rect. 12 2
333 139.32 atmosphere 995.0 270 > th dose independent rect. 12 2
334 139.32 atmosphere 1015.0 270 < th dose independent rect. 12 2
337 139.32 temperature 10.0 270 > th dose independent rect. 14 22
347 139.38 atmosphere 995.0 30 > th dose independent rect. 12 4
354 139.41 temperature 10.0 30 > th dose dependent rect. 18 18
367 139.46 precipitation 0.1 270 < th dose independent rect. 12 2
371 139.46 precipitation 0.1 270 < th dose dependent rect. 12 2
378 139.50 radiation 1.0 270 > th dose independent rect. 12 2
380 139.50 wind 9.0 270 < th dose independent rect. 14 22
388 139.52 temperature 10.0 1440 > th dose independent rect. 7 6
391 139.52 atmosphere 995.0 1440 > th dose independent rect. 7 6
392 139.52 temperature 10.0 1440 > th dose independent rect. 13 18
396 139.53 temperature 15.0 90 > th dose independent rect. 17 19
403 139.54 wind 9.0 30 < th dose independent rect. 6 6
404 139.54 temperature 10.0 30 > th dose independent rect. 6 6
406 139.54 atmosphere 995.0 30 > th dose independent rect. 6 6
407 139.54 atmosphere 1015.0 30 < th dose independent rect. 6 6
408 139.54 temperature 10.0 30 > th dose independent rect. 12 18
414 139.55 precipitation 0.1 30 < th dose independent rect. 6 6
415 139.55 wind 9.0 90 < th dose independent rect. 17 19
417 139.55 precipitation 0.1 30 < th dose dependent rect. 6 6
430 139.60 temperature 10.0 30 > th dose dependent rect. 12 4
431 139.61 temperature 10.0 10 > th dose independent rect. 12 4
435 139.61 atmosphere 1015.0 10 < th dose independent rect. 12 4
438 139.61 precipitation 0.1 10 < th dose independent rect. 12 4
439 139.61 humidity 50.0 10 > th dose independent rect. 12 18
440 139.61 temperature 10.0 10 > th dose independent rect. 16 20
443 139.61 precipitation 0.1 10 < th dose dependent rect. 12 4
467 139.65 precipitation 0.1 270 < th dose independent rect. 15 20
470 139.65 precipitation 0.1 270 < th dose dependent rect. 15 20
476 139.66 atmosphere 995.0 90 > th dose independent rect. 17 19
482 139.67 precipitation 0.1 30 < th dose independent rect. 12 18
483 139.67 precipitation 0.1 30 < th dose dependent rect. 12 18
484 139.68 wind 1.0 30 > th dose independent rect. 4 1
485 139.68 radiation 40.0 90 < th dose independent rect. 12 3
499 139.70 temperature 10.0 270 > th dose dependent rect. 12 2
510 139.74 humidity 90.0 270 < th dose independent rect. 12 1
518 139.76 temperature 10.0 10 > th dose dependent rect. 2 10
524 139.78 atmosphere 995.0 30 > th dose independent rect. 12 18
528 139.79 temperature 10.0 30 > th dose dependent rect. 12 6
541 139.82 precipitation 0.1 10 < th dose independent rect. 12 6
544 139.82 precipitation 0.1 10 < th dose dependent rect. 12 6
548 139.84 temperature 10.0 1440 > th dose independent rect. 13 4
553 139.84 temperature 10.0 1440 > th dose independent rect. 17 20
563 139.85 wind 9.0 30 < th dose dependent rect. 12 18
574 139.88 temperature 10.0 10 > th dose independent rect. 12 6
576 139.88 atmosphere 1015.0 10 < th dose independent rect. 12 6
580 139.88 temperature 10.0 10 > th dose independent rect. 18 18
617 139.95 radiation 1.0 90 > th dose independent rect. 18 18
627 139.97 radiation 1.0 30 > th dose independent rect. 6 6
632 139.98 humidity 90.0 270 < th dose independent rect. 11 4
695 140.08 precipitation 0.1 90 < th dose independent rect. 17 19
697 140.08 precipitation 0.1 90 < th dose dependent rect. 17 19
720 140.13 humidity 70.0 270 > th dose independent rect. 12 1
756 140.20 temperature 10.0 43200 > th dose independent rect. 9 4
771 140.22 temperature 10.0 270 > th dose independent rect. 10 6
772 140.22 atmosphere 1015.0 270 < th dose independent rect. 10 6
830 140.29 atmosphere 1015.0 30 < th dose independent rect. 18 18
831 140.29 humidity 50.0 270 > th dose dependent rect. 11 4
855 140.30 wind 9.0 30 < th dose dependent rect. 6 6
874 140.33 precipitation 0.1 270 < th dose independent rect. 21 9
875 140.33 wind 1.0 90 > th dose independent rect. 5 18
879 140.33 precipitation 0.1 270 < th dose dependent rect. 21 9
884 140.34 humidity 50.0 90 > th dose independent rect. 17 19
895 140.35 wind 7.0 270 < th dose independent rect. 21 9
912 140.37 atmosphere 1005.0 90 > th dose independent rect. 12 3
927 140.39 radiation 1.0 270 < th dose dependent rect. 21 18
931 140.40 temperature 10.0 270 > th dose independent rect. 21 9
932 140.40 temperature 30.0 270 < th dose independent rect. 21 9
933 140.40 humidity 50.0 270 > th dose independent rect. 21 9
936 140.40 atmosphere 995.0 270 > th dose independent rect. 21 9
937 140.40 radiation 20.0 270 < th dose independent rect. 21 9
940 140.40 temperature 10.0 270 > th dose independent rect. 6 15
944 140.40 humidity 90.0 10 < th dose dependent rect. 4 1
958 140.42 radiation 40.0 270 < th dose dependent rect. 21 9
963 140.43 humidity 90.0 10 < th dose dependent rect. 24 5
981 140.46 wind 1.0 270 > th dose independent rect. 15 20
996 140.49 atmosphere 1015.0 270 < th dose independent rect. 6 15