Os07g0611600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os07g0611600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 82.93 | 0.428 | 10.6 | -0.987 | 0.328 | -1.74 | 0.337 | -0.728 | -6.97 | 0.0952 | 31.69 | 79 | -- | -- |
| 83.41 | 0.425 | 10.6 | -1.08 | 0.332 | -1.76 | 0.233 | -- | -6.98 | 23.9 | 32.77 | 75 | -- | -- |
| 83.29 | 0.425 | 10.6 | -1.05 | 0.326 | -1.77 | -- | -0.433 | -6.98 | 0.401 | 31.95 | 78 | -- | -- |
| 83.45 | 0.425 | 10.6 | -1.11 | 0.324 | -1.79 | -- | -- | -7 | 0.303 | 32.65 | 73 | -- | -- |
| 87.04 | 0.435 | 10.6 | -1 | -- | -1.55 | -- | -0.589 | -6.94 | -- | 31.35 | 172 | -- | -- |
| 118.98 | 0.511 | 10.5 | -0.711 | 0.359 | -- | 0.874 | -- | -6.72 | 17.5 | -- | -- | -- | -- |
| 120.83 | 0.515 | 10.5 | -0.713 | 0.365 | -- | -- | -- | -6.71 | 17.2 | -- | -- | -- | -- |
| 87.09 | 0.435 | 10.6 | -1.07 | -- | -1.52 | -- | -- | -6.97 | -- | 31.34 | 187 | -- | -- |
| 112.91 | 0.495 | 10.6 | -- | 0.23 | -1.38 | -- | -- | -6.81 | 23.3 | 33.3 | 64 | -- | -- |
| 127.77 | 0.528 | 10.5 | -0.726 | -- | -- | -- | -- | -6.72 | -- | -- | -- | -- | -- |
| 134.23 | 0.542 | 10.5 | -- | 0.377 | -- | -- | -- | -6.63 | 17.2 | -- | -- | -- | -- |
| 115.04 | 0.5 | 10.6 | -- | -- | -1.31 | -- | -- | -6.78 | -- | 38.13 | 156 | -- | -- |
| 141.66 | 0.556 | 10.5 | -- | -- | -- | -- | -- | -6.64 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 77.85 | temperature | 15.0 | 90 | > th | dose dependent | rect. | 8 | 23 |
| 5 | 79.50 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 3 | 23 |
| 7 | 81.16 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 6 | 22 |
| 8 | 81.16 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 16 | 23 |
| 9 | 81.23 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 11 | 23 |
| 20 | 82.30 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 13 | 22 |
| 25 | 82.62 | temperature | 15.0 | 30 | > th | dose dependent | rect. | 6 | 23 |
| 29 | 82.84 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 7 | 23 |
| 34 | 82.96 | temperature | 15.0 | 270 | > th | dose dependent | sin | 9 | NA |
| 42 | 83.34 | temperature | 30.0 | 90 | < th | dose dependent | no | NA | NA |
| 45 | 83.44 | temperature | 15.0 | 90 | > th | dose dependent | no | NA | NA |
| 68 | 84.15 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 22 | 23 |
| 69 | 84.16 | temperature | 30.0 | 270 | < th | dose dependent | sin | 9 | NA |
| 78 | 84.27 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 24 | 23 |
| 97 | 84.77 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 17 | 23 |
| 105 | 84.93 | temperature | 15.0 | 90 | > th | dose dependent | rect. | 8 | 20 |
| 112 | 85.14 | temperature | 15.0 | 90 | > th | dose dependent | rect. | 1 | 23 |
| 172 | 86.18 | temperature | 20.0 | 30 | > th | dose dependent | rect. | 21 | 23 |
| 189 | 86.39 | temperature | 20.0 | 90 | > th | dose dependent | rect. | 19 | 23 |
| 222 | 86.87 | temperature | 20.0 | 30 | > th | dose dependent | rect. | 23 | 23 |
| 248 | 87.16 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 5 | 23 |
| 275 | 87.39 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 17 | 23 |
| 308 | 87.84 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 22 | 13 |
| 324 | 87.95 | temperature | 20.0 | 30 | > th | dose dependent | rect. | 13 | 23 |
| 562 | 89.56 | temperature | 20.0 | 270 | > th | dose dependent | rect. | 19 | 16 |
| 853 | 91.16 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 20 | 1 |
| 880 | 91.27 | temperature | 25.0 | 270 | < th | dose dependent | rect. | 22 | 11 |
| 925 | 91.54 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 17 | 1 |
| 960 | 91.71 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 18 | 12 |
| 972 | 91.75 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 9 | 15 |
| 977 | 91.77 | temperature | 20.0 | 30 | > th | dose dependent | rect. | 11 | 23 |
| 1000 | 91.92 | temperature | 15.0 | 90 | > th | dose dependent | rect. | 8 | 15 |