Os07g0608900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Peroxisome assembly protein 10 (Peroxin-10) (AthPEX10) (Pex10p) (PER8).
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Os07g0608900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Peroxisome assembly protein 10 (Peroxin-10) (AthPEX10) (Pex10p) (PER8).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 38.01 | 0.29 | 11 | 0.836 | 1.5 | -1.05 | 0.0777 | 1.74 | 0.126 | 16.5 | 24.3 | 5658 | -- | -- |
| 39.28 | 0.292 | 11 | 0.582 | 1.5 | -0.902 | -0.13 | -- | 0.19 | 16.4 | 21.83 | 7054 | -- | -- |
| 37.14 | 0.284 | 11 | 1.06 | 1.46 | -1.18 | -- | 3.43 | -0.0678 | 16.4 | 28.04 | 5558 | -- | -- |
| 38.22 | 0.288 | 11 | 0.374 | 1.49 | -0.871 | -- | -- | 0.143 | 16.5 | 22.91 | 7014 | -- | -- |
| 153.42 | 0.577 | 11.1 | 0.921 | -- | -1.29 | -- | 3.2 | -0.201 | -- | 28.77 | 5553 | -- | -- |
| 68.07 | 0.387 | 11.1 | -0.0199 | 1.55 | -- | 0.177 | -- | -0.124 | 16.4 | -- | -- | -- | -- |
| 68.15 | 0.387 | 11.1 | -0.0185 | 1.56 | -- | -- | -- | -0.123 | 16.4 | -- | -- | -- | -- |
| 155.81 | 0.581 | 11 | 0.33 | -- | -0.982 | -- | -- | 0.0892 | -- | 24.69 | 6992 | -- | -- |
| 39.87 | 0.294 | 11.1 | -- | 1.48 | -0.715 | -- | -- | -0.0151 | 16.4 | 27.9 | 7001 | -- | -- |
| 198.05 | 0.658 | 11.1 | -0.0798 | -- | -- | -- | -- | -0.164 | -- | -- | -- | -- | -- |
| 68.16 | 0.386 | 11.1 | -- | 1.56 | -- | -- | -- | -0.121 | 16.4 | -- | -- | -- | -- |
| 153.66 | 0.577 | 11.1 | -- | -- | -0.852 | -- | -- | -0.148 | -- | 32.41 | 6948 | -- | -- |
| 198.22 | 0.657 | 11.1 | -- | -- | -- | -- | -- | -0.155 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 35.93 | temperature | 15 | 270 | > th | dose dependent | rect. | 15 | 15 |
| 11 | 37.44 | temperature | 25 | 1440 | > th | dose dependent | rect. | 16 | 3 |
| 20 | 38.11 | temperature | 10 | 1440 | > th | dose dependent | rect. | 16 | 3 |
| 31 | 38.33 | temperature | 25 | 1440 | > th | dose dependent | rect. | 15 | 18 |
| 64 | 38.67 | temperature | 25 | 1440 | > th | dose dependent | rect. | 12 | 21 |
| 83 | 38.74 | temperature | 25 | 1440 | > th | dose dependent | sin | 18 | NA |
| 102 | 38.80 | temperature | 10 | 720 | > th | dose dependent | rect. | 8 | 21 |
| 106 | 38.81 | temperature | 25 | 1440 | > th | dose dependent | rect. | 6 | 14 |
| 108 | 38.81 | temperature | 25 | 1440 | > th | dose dependent | rect. | 4 | 16 |
| 125 | 38.83 | temperature | 25 | 1440 | > th | dose dependent | rect. | 11 | 9 |
| 203 | 38.92 | temperature | 25 | 1440 | > th | dose dependent | no | NA | NA |
| 207 | 38.92 | temperature | 10 | 720 | > th | dose dependent | rect. | 10 | 19 |
| 308 | 39.07 | temperature | 10 | 720 | > th | dose dependent | sin | 15 | NA |
| 343 | 39.13 | temperature | 15 | 270 | > th | dose dependent | rect. | 13 | 20 |
| 436 | 39.29 | temperature | 10 | 1440 | > th | dose dependent | rect. | 6 | 15 |
| 481 | 39.36 | temperature | 10 | 270 | > th | dose dependent | rect. | 24 | 22 |
| 636 | 39.54 | temperature | 30 | 1440 | < th | dose dependent | rect. | 18 | 1 |
| 652 | 39.56 | temperature | 10 | 1440 | > th | dose dependent | sin | 20 | NA |
| 708 | 39.63 | temperature | 20 | 1440 | > th | dose dependent | rect. | 6 | 3 |
| 997 | 40.00 | temperature | 30 | 1440 | < th | dose independent | rect. | 14 | 21 |