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Os07g0608100

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 13 (0.0184) R2 : 0.606
β1 : -- (--) R2dD : -- R2D : --
β2 : 1.25 (0.048) R2dC : 0.584 R2C : 0.582
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.177 (0.0386) R2dN8 : 0.0234 R2N8 : 0.0214
σ : 0.346
deviance : 54.74
__
_____
C
peak time of C : 17.6
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
48.95 0.329 13 0.0732 1.25 0.358 -0.362 -0.878 -0.0745 17.8 19.21 1303 -- --
50.78 0.332 13 0.0698 1.25 0.359 -0.375 -- -0.078 17.8 19.51 1301 -- --
49.27 0.327 13 0.0764 1.25 0.355 -- -0.869 -0.0765 17.8 19.21 1303 -- --
50.91 0.332 13 0.0226 1.27 0.331 -- -- -0.111 17.8 19.51 1298 -- --
128.91 0.529 13 0.0782 -- 0.368 -- -0.816 -0.0654 -- 24.71 1336 -- --
54.47 0.346 13 -0.0381 1.25 -- -0.309 -- -0.18 17.6 -- -- -- --
54.7 0.346 13 -0.0367 1.25 -- -- -- -0.181 17.6 -- -- -- --
128.82 0.529 13 -0.0256 -- 0.498 -- -- -0.157 -- 49.12 1333 -- --
50.88 0.332 13 -- 1.27 0.34 -- -- -0.106 17.8 19.51 1299 -- --
135.3 0.544 13 -0.0773 -- -- -- -- -0.211 -- -- -- -- --
54.74 0.346 13 -- 1.25 -- -- -- -0.177 17.6 -- -- -- --
128.92 0.529 13 -- -- 0.498 -- -- -0.157 -- 49.12 1333 -- --
135.46 0.543 13 -- -- -- -- -- -0.202 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 43.34 humidity 70.0 30 > th dose dependent rect. 21 7
2 43.50 temperature 10.0 270 > th dose dependent rect. 6 9
3 43.54 humidity 70.0 30 > th dose dependent rect. 23 5
11 43.99 atmosphere 995.0 10 > th dose dependent rect. 4 19
12 44.00 atmosphere 1015.0 30 < th dose dependent rect. 23 5
18 44.32 temperature 25.0 270 < th dose independent rect. 2 9
27 44.43 atmosphere 1015.0 30 < th dose dependent rect. 21 7
31 44.58 atmosphere 1015.0 30 < th dose independent rect. 23 5
34 44.58 temperature 10.0 270 > th dose dependent rect. 21 16
44 44.82 atmosphere 1000.0 30 > th dose independent rect. 4 19
47 44.90 humidity 80.0 30 > th dose independent rect. 23 5
54 44.98 atmosphere 995.0 270 > th dose dependent rect. 15 16
55 45.00 atmosphere 995.0 10 > th dose dependent rect. 17 15
58 45.03 humidity 70.0 270 > th dose dependent rect. 23 1
62 45.12 temperature 10.0 30 > th dose independent rect. 23 5
63 45.12 temperature 30.0 30 < th dose independent rect. 23 5
64 45.12 humidity 50.0 30 > th dose independent rect. 23 5
67 45.12 atmosphere 995.0 30 > th dose independent rect. 23 5
68 45.12 radiation 1.0 30 < th dose independent rect. 23 5
73 45.12 temperature 10.0 30 > th dose independent rect. 4 19
75 45.12 atmosphere 1015.0 30 < th dose independent rect. 4 19
76 45.12 radiation 1.0 30 < th dose dependent rect. 23 5
81 45.13 wind 9.0 30 < th dose independent rect. 23 5
89 45.22 temperature 30.0 30 < th dose dependent rect. 4 19
90 45.23 humidity 70.0 270 > th dose dependent rect. 21 4
91 45.25 atmosphere 1015.0 270 < th dose dependent rect. 23 1
92 45.26 atmosphere 1015.0 270 < th dose dependent rect. 21 5
95 45.28 temperature 10.0 30 > th dose dependent rect. 23 5
120 45.35 wind 9.0 30 < th dose independent rect. 4 19
140 45.46 wind 9.0 30 < th dose dependent rect. 23 5
143 45.48 precipitation 0.1 10 < th dose independent rect. 4 19
145 45.48 precipitation 0.1 10 < th dose dependent rect. 4 19
152 45.53 atmosphere 1000.0 270 > th dose independent rect. 15 16
155 45.54 precipitation 0.1 30 < th dose independent rect. 23 5
156 45.54 precipitation 0.1 30 < th dose dependent rect. 23 5
162 45.56 atmosphere 995.0 30 > th dose dependent rect. 4 17
163 45.57 temperature 25.0 270 > th dose independent rect. 7 7
164 45.57 temperature 20.0 270 > th dose independent rect. 6 9
171 45.60 atmosphere 1015.0 10 < th dose dependent rect. 10 18
175 45.62 temperature 30.0 30 < th dose dependent rect. 4 17
184 45.68 temperature 25.0 270 < th dose independent rect. 2 17
188 45.69 temperature 10.0 10 > th dose dependent rect. 10 18
210 45.81 temperature 25.0 270 < th dose independent rect. 1 19
212 45.82 atmosphere 1015.0 270 < th dose independent rect. 23 1
228 45.90 temperature 25.0 270 > th dose independent rect. 23 15
229 45.90 wind 5.0 30 < th dose dependent rect. 4 6
234 45.92 humidity 80.0 30 > th dose independent rect. 21 7
239 45.93 wind 9.0 270 < th dose dependent rect. 23 1
240 45.93 temperature 10.0 270 > th dose dependent rect. 7 18
241 45.94 atmosphere 1015.0 30 < th dose independent rect. 21 7
266 46.03 temperature 30.0 270 < th dose dependent rect. 2 17
283 46.08 temperature 10.0 10 > th dose dependent rect. 8 20
305 46.17 wind 9.0 30 < th dose independent rect. 21 7
309 46.19 temperature 10.0 30 > th dose independent rect. 21 7
310 46.19 temperature 30.0 30 < th dose independent rect. 21 7
311 46.19 humidity 50.0 30 > th dose independent rect. 21 7
314 46.19 atmosphere 995.0 30 > th dose independent rect. 21 7
315 46.19 radiation 1.0 30 < th dose independent rect. 21 7
321 46.19 temperature 10.0 30 > th dose independent rect. 4 17
323 46.19 atmosphere 1015.0 30 < th dose independent rect. 4 17
325 46.19 radiation 1.0 30 < th dose dependent rect. 21 7
333 46.21 wind 9.0 30 < th dose dependent rect. 21 7
342 46.26 temperature 10.0 270 > th dose dependent rect. 23 1
360 46.27 atmosphere 995.0 10 > th dose dependent rect. 4 6
370 46.28 radiation 30.0 30 < th dose dependent rect. 4 19
375 46.30 atmosphere 995.0 90 > th dose dependent rect. 15 8
396 46.36 wind 3.0 30 < th dose independent rect. 4 6
399 46.36 atmosphere 995.0 30 > th dose independent rect. 4 17
402 46.37 temperature 10.0 10 > th dose dependent rect. 23 17
413 46.40 precipitation 0.1 270 < th dose independent rect. 23 1
415 46.40 atmosphere 1000.0 10 > th dose independent rect. 17 15
417 46.40 precipitation 0.1 270 < th dose dependent rect. 23 1
424 46.41 humidity 50.0 270 > th dose independent rect. 21 17
431 46.43 wind 9.0 270 < th dose independent rect. 23 1
432 46.43 temperature 10.0 270 > th dose independent rect. 23 1
433 46.43 temperature 30.0 270 < th dose independent rect. 23 1
434 46.43 humidity 50.0 270 > th dose independent rect. 23 1
437 46.43 atmosphere 995.0 270 > th dose independent rect. 23 1
438 46.43 radiation 1.0 270 < th dose independent rect. 23 1
443 46.43 atmosphere 1000.0 10 > th dose independent rect. 4 6
444 46.43 wind 9.0 30 < th dose independent rect. 4 17
446 46.43 temperature 10.0 270 > th dose independent rect. 24 23
447 46.43 radiation 1.0 270 < th dose dependent rect. 23 1
456 46.45 atmosphere 1000.0 10 > th dose independent rect. 17 17
469 46.47 temperature 15.0 270 > th dose independent rect. 14 7
471 46.47 precipitation 0.1 270 < th dose independent rect. 1 9
472 46.47 precipitation 0.1 30 < th dose independent rect. 4 17
476 46.47 precipitation 0.1 270 < th dose dependent rect. 1 9
477 46.47 precipitation 0.1 30 < th dose dependent rect. 4 17
478 46.48 precipitation 0.1 270 < th dose independent rect. 21 5
479 46.48 atmosphere 1000.0 90 > th dose independent rect. 15 8
480 46.48 precipitation 0.1 270 < th dose dependent rect. 21 5
484 46.49 precipitation 0.1 30 < th dose independent rect. 21 7
485 46.49 precipitation 0.1 30 < th dose dependent rect. 21 7
497 46.51 atmosphere 995.0 10 > th dose dependent rect. 16 7
523 46.53 precipitation 0.1 270 < th dose independent rect. 2 19
528 46.53 precipitation 0.1 270 < th dose dependent rect. 2 19
530 46.54 atmosphere 995.0 270 > th dose independent rect. 2 19
534 46.54 atmosphere 1015.0 10 < th dose dependent rect. 8 20
540 46.55 temperature 30.0 270 < th dose dependent rect. 2 8
543 46.56 radiation 10.0 10 < th dose independent rect. 4 19
548 46.58 temperature 10.0 270 > th dose independent rect. 21 5
549 46.58 temperature 30.0 270 < th dose independent rect. 21 5
550 46.58 humidity 50.0 270 > th dose independent rect. 21 5
553 46.58 atmosphere 995.0 270 > th dose independent rect. 21 5
554 46.58 radiation 1.0 270 < th dose independent rect. 21 5
561 46.58 temperature 10.0 270 > th dose independent rect. 2 19
562 46.58 radiation 1.0 270 < th dose dependent rect. 21 5
569 46.59 wind 9.0 270 < th dose independent rect. 21 5
578 46.60 temperature 15.0 270 > th dose independent rect. 15 16
635 46.72 atmosphere 1015.0 10 < th dose dependent rect. 23 17
646 46.76 wind 1.0 270 > th dose independent rect. 7 8
649 46.76 atmosphere 995.0 270 > th dose dependent rect. 1 8
670 46.79 atmosphere 1000.0 10 > th dose independent rect. 16 7
671 46.79 wind 7.0 270 < th dose independent rect. 21 16
702 46.82 precipitation 0.1 270 < th dose independent rect. 10 15
703 46.82 temperature 30.0 10 < th dose independent rect. 4 19
706 46.82 precipitation 0.1 270 < th dose dependent rect. 10 15
746 46.83 temperature 15.0 10 > th dose dependent rect. 8 9
750 46.84 temperature 25.0 270 > th dose independent rect. 10 1
765 46.84 atmosphere 1015.0 270 < th dose independent rect. 21 17
768 46.84 atmosphere 1015.0 270 < th dose independent rect. 2 18
781 46.86 radiation 40.0 270 < th dose independent rect. 13 8
782 46.86 wind 9.0 270 < th dose independent rect. 2 19
794 46.88 temperature 30.0 30 < th dose dependent rect. 4 8
818 46.91 wind 9.0 270 < th dose dependent rect. 21 4
832 46.92 radiation 30.0 270 < th dose independent rect. 15 15
871 46.95 wind 9.0 10 < th dose independent rect. 10 18
892 46.96 temperature 30.0 10 < th dose independent rect. 4 6
908 46.97 temperature 10.0 270 > th dose independent rect. 21 16
909 46.97 atmosphere 995.0 270 > th dose independent rect. 21 16
912 46.97 humidity 50.0 10 > th dose independent rect. 10 18
917 46.98 temperature 30.0 10 < th dose independent rect. 4 8
918 46.98 atmosphere 1015.0 90 < th dose independent rect. 23 16
928 46.99 atmosphere 1015.0 10 < th dose dependent rect. 12 16
945 47.01 humidity 50.0 30 > th dose dependent rect. 12 16
948 47.02 wind 7.0 90 < th dose independent rect. 23 16
978 47.03 wind 9.0 30 < th dose dependent rect. 4 19
980 47.04 temperature 25.0 270 > th dose independent sin 5 NA
982 47.04 precipitation 0.1 10 < th dose independent rect. 4 6
983 47.04 humidity 50.0 270 > th dose independent rect. 7 8
986 47.04 atmosphere 1015.0 10 < th dose independent rect. 10 18
987 47.04 precipitation 0.1 10 < th dose dependent rect. 4 6