Os07g0607200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF751 family protein.
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Os07g0607200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF751 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = atmosphere,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 19.84 | 0.207 | 14.4 | -0.962 | 0.596 | -2.09 | -0.389 | 9.87 | -0.257 | 23.3 | 1000 | 10 | -- | -- |
| 21.22 | 0.215 | 14.3 | -0.303 | 0.607 | -0.343 | -0.359 | -- | -0.258 | 23.4 | 1000 | 39 | -- | -- |
| 20.35 | 0.21 | 14.4 | -0.935 | 0.601 | -2.11 | -- | 9.94 | -0.254 | 23.4 | 999.8 | 18 | -- | -- |
| 21.7 | 0.217 | 14.3 | -0.294 | 0.599 | -0.36 | -- | -- | -0.261 | 23.4 | 999.6 | 41 | -- | -- |
| 42.77 | 0.305 | 14.4 | -1.02 | -- | -2.36 | -- | 11.5 | -0.247 | -- | 999.9 | 33 | -- | -- |
| 24.47 | 0.232 | 14.3 | -0.242 | 0.601 | -- | -0.376 | -- | -0.281 | 23.3 | -- | -- | -- | -- |
| 25.08 | 0.235 | 14.3 | -0.227 | 0.603 | -- | -- | -- | -0.279 | 23.3 | -- | -- | -- | -- |
| 44.5 | 0.311 | 14.3 | -0.269 | -- | -0.376 | -- | -- | -0.251 | -- | 999.5 | 42 | -- | -- |
| 23.78 | 0.227 | 14.3 | -- | 0.602 | -0.33 | -- | -- | -0.229 | 23.3 | 999.6 | 36 | -- | -- |
| 47.82 | 0.323 | 14.3 | -0.212 | -- | -- | -- | -- | -0.273 | -- | -- | -- | -- | -- |
| 26.43 | 0.24 | 14.3 | -- | 0.6 | -- | -- | -- | -0.254 | 23.3 | -- | -- | -- | -- |
| 46.37 | 0.317 | 14.2 | -- | -- | -0.33 | -- | -- | -0.225 | -- | 999.6 | 42 | -- | -- |
| 49.01 | 0.327 | 14.3 | -- | -- | -- | -- | -- | -0.25 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 18.68 | temperature | 25 | 4320 | > th | dose dependent | rect. | 5 | 2 |
| 5 | 19.00 | temperature | 25 | 4320 | > th | dose independent | rect. | 1 | 6 |
| 6 | 19.05 | wind | 1 | 14400 | < th | dose dependent | rect. | 2 | 1 |
| 7 | 19.05 | temperature | 25 | 4320 | > th | dose dependent | rect. | 24 | 8 |
| 14 | 19.23 | temperature | 25 | 4320 | < th | dose independent | rect. | 5 | 1 |
| 18 | 19.26 | temperature | 25 | 4320 | > th | dose independent | rect. | 5 | 2 |
| 20 | 19.29 | temperature | 25 | 4320 | < th | dose independent | rect. | 3 | 4 |
| 36 | 19.49 | temperature | 25 | 4320 | > th | dose independent | rect. | 1 | 1 |
| 56 | 19.73 | temperature | 30 | 1440 | > th | dose independent | rect. | 10 | 1 |
| 57 | 19.73 | temperature | 25 | 4320 | > th | dose dependent | rect. | 20 | 6 |
| 69 | 19.82 | temperature | 30 | 4320 | < th | dose independent | rect. | 9 | 2 |
| 70 | 19.82 | atmosphere | 1000 | 10 | < th | dose independent | rect. | 9 | 23 |
| 71 | 19.82 | atmosphere | 1000 | 10 | < th | dose independent | rect. | 19 | 23 |
| 72 | 19.82 | atmosphere | 1000 | 10 | < th | dose independent | rect. | 23 | 23 |
| 76 | 19.84 | atmosphere | 1000 | 10 | > th | dose independent | no | NA | NA |
| 78 | 19.84 | atmosphere | 1000 | 10 | < th | dose independent | no | NA | NA |
| 80 | 19.84 | temperature | 30 | 4320 | < th | dose independent | rect. | 4 | 7 |
| 81 | 19.84 | atmosphere | 1000 | 10 | < th | dose independent | rect. | 7 | 23 |
| 83 | 19.84 | atmosphere | 1000 | 10 | < th | dose independent | rect. | 11 | 23 |
| 84 | 19.84 | atmosphere | 1000 | 10 | < th | dose independent | rect. | 13 | 23 |
| 86 | 19.84 | atmosphere | 1000 | 10 | < th | dose independent | rect. | 21 | 23 |
| 94 | 19.85 | atmosphere | 1000 | 10 | < th | dose independent | rect. | 5 | 23 |
| 100 | 19.85 | atmosphere | 1000 | 10 | < th | dose independent | rect. | 17 | 23 |
| 106 | 19.86 | temperature | 30 | 4320 | < th | dose independent | rect. | 6 | 5 |
| 110 | 19.86 | atmosphere | 1000 | 30 | < th | dose independent | rect. | 1 | 23 |
| 111 | 19.86 | atmosphere | 1000 | 30 | < th | dose independent | rect. | 15 | 23 |
| 127 | 19.87 | temperature | 30 | 4320 | < th | dose independent | rect. | 22 | 13 |
| 130 | 19.87 | temperature | 30 | 4320 | < th | dose independent | rect. | 20 | 15 |
| 134 | 19.87 | atmosphere | 1000 | 30 | < th | dose independent | rect. | 3 | 23 |
| 161 | 19.90 | temperature | 30 | 1440 | > th | dose independent | sin | 6 | NA |
| 230 | 19.95 | temperature | 25 | 4320 | > th | dose dependent | rect. | 24 | 2 |
| 231 | 19.96 | temperature | 30 | 1440 | < th | dose independent | sin | 7 | NA |
| 249 | 19.98 | wind | 1 | 14400 | < th | dose independent | rect. | 2 | 1 |
| 277 | 20.01 | temperature | 30 | 1440 | > th | dose independent | rect. | 8 | 7 |
| 302 | 20.02 | wind | 5 | 14400 | > th | dose independent | rect. | 20 | 1 |
| 311 | 20.02 | wind | 1 | 14400 | < th | dose dependent | rect. | 10 | 1 |
| 376 | 20.07 | temperature | 30 | 4320 | > th | dose dependent | rect. | 11 | 1 |
| 377 | 20.07 | temperature | 25 | 4320 | > th | dose dependent | rect. | 20 | 1 |
| 432 | 20.10 | wind | 5 | 14400 | < th | dose independent | rect. | 20 | 1 |
| 455 | 20.12 | wind | 5 | 14400 | > th | dose independent | rect. | 20 | 3 |
| 503 | 20.17 | wind | 1 | 14400 | < th | dose independent | rect. | 10 | 1 |
| 553 | 20.20 | wind | 1 | 14400 | > th | dose independent | rect. | 2 | 1 |
| 614 | 20.24 | wind | 1 | 14400 | > th | dose independent | rect. | 10 | 1 |
| 703 | 20.28 | wind | 5 | 14400 | > th | dose dependent | rect. | 19 | 6 |
| 707 | 20.29 | temperature | 30 | 4320 | > th | dose dependent | sin | 7 | NA |
| 747 | 20.31 | temperature | 25 | 4320 | > th | dose dependent | sin | 10 | NA |
| 789 | 20.33 | temperature | 30 | 4320 | < th | dose independent | rect. | 15 | 21 |
| 793 | 20.33 | wind | 5 | 14400 | > th | dose dependent | rect. | 19 | 4 |
| 806 | 20.34 | wind | 5 | 14400 | > th | dose dependent | rect. | 19 | 2 |
| 810 | 20.35 | atmosphere | 1000 | 1440 | > th | dose independent | rect. | 23 | 1 |
| 827 | 20.35 | temperature | 30 | 4320 | > th | dose independent | rect. | 15 | 21 |
| 832 | 20.35 | temperature | 30 | 1440 | < th | dose independent | rect. | 16 | 23 |
| 837 | 20.36 | atmosphere | 1000 | 1440 | > th | dose independent | rect. | 21 | 3 |
| 838 | 20.36 | atmosphere | 1000 | 1440 | < th | dose independent | rect. | 21 | 4 |
| 841 | 20.36 | atmosphere | 1000 | 1440 | > th | dose independent | rect. | 21 | 5 |