Os07g0598200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os07g0598200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 94.28 | 0.456 | 11.1 | 0.0391 | 0.994 | -1.25 | -0.533 | 3.41 | -0.41 | 14.7 | 28.2 | 1288 | -- | -- |
| 96.37 | 0.457 | 11.1 | -0.551 | 0.887 | -1.02 | -0.471 | -- | -0.329 | 14.9 | 25.77 | 1287 | -- | -- |
| 95.17 | 0.454 | 11.1 | 0.0984 | 0.995 | -1.28 | -- | 3.72 | -0.393 | 14.9 | 28.09 | 1282 | -- | -- |
| 96.3 | 0.457 | 11.2 | -0.65 | 0.961 | -0.897 | -- | -- | -0.416 | 14.8 | 26.82 | 1289 | -- | -- |
| 146.59 | 0.564 | 11.1 | -0.135 | -- | -1.49 | -- | 2.08 | -0.24 | -- | 25.46 | 1175 | -- | -- |
| 130.76 | 0.536 | 11.1 | -0.945 | 1.12 | -- | -0.393 | -- | -0.435 | 14.6 | -- | -- | -- | -- |
| 131.27 | 0.537 | 11.1 | -0.955 | 1.12 | -- | -- | -- | -0.437 | 14.7 | -- | -- | -- | -- |
| 147.43 | 0.566 | 11.1 | -0.615 | -- | -1.25 | -- | -- | -0.327 | -- | 25.03 | 1190 | -- | -- |
| 106.96 | 0.482 | 11.1 | -- | 0.983 | -1.03 | -- | -- | -0.295 | 14.8 | 26 | 1320 | -- | -- |
| 204.26 | 0.668 | 11.2 | -1 | -- | -- | -- | -- | -0.466 | -- | -- | -- | -- | -- |
| 155.3 | 0.583 | 11.1 | -- | 1.14 | -- | -- | -- | -0.331 | 14.7 | -- | -- | -- | -- |
| 156.65 | 0.583 | 11.1 | -- | -- | -1.39 | -- | -- | -0.233 | -- | 24.8 | 1186 | -- | -- |
| 230.76 | 0.709 | 11.1 | -- | -- | -- | -- | -- | -0.354 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 82.19 | humidity | 90 | 720 | < th | dose dependent | rect. | 18 | 5 |
| 6 | 83.81 | temperature | 25 | 720 | > th | dose dependent | rect. | 19 | 4 |
| 56 | 86.43 | humidity | 70 | 720 | < th | dose independent | rect. | 18 | 2 |
| 88 | 87.08 | humidity | 60 | 720 | > th | dose dependent | rect. | 17 | 6 |
| 94 | 87.53 | humidity | 70 | 720 | < th | dose dependent | rect. | 19 | 12 |
| 135 | 88.60 | humidity | 50 | 1440 | < th | dose independent | rect. | 16 | 1 |
| 142 | 88.86 | humidity | 50 | 1440 | < th | dose dependent | rect. | 16 | 1 |
| 171 | 89.88 | humidity | 70 | 1440 | > th | dose independent | rect. | 19 | 8 |
| 175 | 89.94 | humidity | 70 | 1440 | > th | dose independent | rect. | 19 | 6 |
| 179 | 90.02 | humidity | 70 | 720 | > th | dose independent | sin | 11 | NA |
| 184 | 90.16 | humidity | 70 | 1440 | > th | dose independent | rect. | 19 | 2 |
| 189 | 90.21 | humidity | 80 | 720 | > th | dose independent | rect. | 16 | 6 |
| 213 | 90.47 | humidity | 50 | 1440 | > th | dose independent | rect. | 16 | 1 |
| 233 | 90.73 | humidity | 70 | 720 | > th | dose independent | rect. | 17 | 16 |
| 272 | 91.36 | humidity | 70 | 720 | > th | dose independent | rect. | 16 | 9 |
| 289 | 91.58 | temperature | 30 | 720 | > th | dose independent | rect. | 18 | 1 |
| 394 | 93.02 | temperature | 30 | 1440 | < th | dose independent | rect. | 18 | 8 |
| 402 | 93.14 | temperature | 30 | 1440 | < th | dose independent | rect. | 18 | 10 |
| 418 | 93.39 | humidity | 80 | 720 | > th | dose dependent | rect. | 21 | 1 |
| 437 | 93.68 | radiation | 30 | 1440 | < th | dose dependent | rect. | 18 | 9 |
| 440 | 93.71 | temperature | 30 | 720 | < th | dose independent | rect. | 17 | 16 |
| 448 | 93.78 | temperature | 30 | 1440 | < th | dose independent | rect. | 18 | 4 |
| 473 | 94.12 | temperature | 30 | 1440 | < th | dose independent | rect. | 18 | 14 |
| 474 | 94.12 | temperature | 30 | 1440 | < th | dose independent | rect. | 18 | 20 |
| 499 | 94.26 | wind | 7 | 43200 | > th | dose independent | rect. | 11 | 3 |
| 504 | 94.35 | wind | 7 | 43200 | < th | dose independent | rect. | 11 | 3 |
| 511 | 94.43 | radiation | 30 | 14400 | > th | dose independent | rect. | 16 | 1 |
| 537 | 94.50 | wind | 5 | 43200 | > th | dose dependent | rect. | 11 | 3 |
| 546 | 94.54 | humidity | 80 | 1440 | < th | dose dependent | sin | 13 | NA |
| 566 | 94.58 | wind | 7 | 43200 | > th | dose independent | rect. | 12 | 1 |
| 569 | 94.61 | temperature | 30 | 14400 | < th | dose independent | rect. | 18 | 2 |
| 571 | 94.61 | temperature | 30 | 1440 | > th | dose independent | rect. | 17 | 21 |
| 592 | 94.67 | wind | 7 | 43200 | < th | dose independent | rect. | 12 | 1 |
| 598 | 94.70 | temperature | 30 | 14400 | < th | dose independent | rect. | 18 | 5 |
| 608 | 94.75 | humidity | 70 | 1440 | < th | dose independent | sin | 12 | NA |
| 615 | 94.79 | temperature | 25 | 14400 | > th | dose dependent | rect. | 22 | 1 |
| 623 | 94.88 | wind | 1 | 90 | < th | dose dependent | rect. | 4 | 1 |
| 628 | 94.94 | wind | 1 | 90 | < th | dose independent | rect. | 4 | 1 |
| 656 | 95.16 | temperature | 30 | 1440 | < th | dose independent | rect. | 9 | 5 |
| 690 | 95.27 | temperature | 25 | 14400 | > th | dose independent | rect. | 23 | 1 |
| 699 | 95.38 | temperature | 30 | 1440 | < th | dose independent | sin | 11 | NA |
| 709 | 95.41 | temperature | 30 | 1440 | < th | dose independent | rect. | 10 | 2 |
| 723 | 95.54 | temperature | 30 | 1440 | > th | dose independent | sin | 12 | NA |
| 775 | 95.64 | temperature | 30 | 1440 | > th | dose independent | rect. | 9 | 5 |
| 821 | 95.76 | temperature | 30 | 1440 | < th | dose independent | rect. | 2 | 12 |
| 839 | 95.79 | temperature | 30 | 1440 | < th | dose independent | rect. | 4 | 10 |
| 862 | 95.82 | temperature | 30 | 1440 | < th | dose independent | rect. | 22 | 16 |
| 866 | 95.83 | temperature | 30 | 1440 | > th | dose dependent | sin | 11 | NA |
| 963 | 96.14 | temperature | 25 | 1440 | > th | dose dependent | rect. | 7 | 1 |