Os07g0597000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Eukaryotic translation initiation factor 5A (eIF-5A).
FiT-DB / Search/ Help/ Sample detail
|
Os07g0597000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Similar to Eukaryotic translation initiation factor 5A (eIF-5A).
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 22.01 | 0.22 | 14.7 | -0.724 | 0.67 | -0.272 | 0.676 | -3.06 | -0.0743 | 19.8 | 19.1 | 549 | -- | -- |
| 28.26 | 0.248 | 14.6 | -0.0979 | 0.714 | -0.438 | -0.0713 | -- | 0.0858 | 19.9 | 19.61 | 559 | -- | -- |
| 22.99 | 0.223 | 14.7 | -0.629 | 0.666 | -0.279 | -- | -2.5 | -0.0383 | 19.7 | 18.8 | 491 | -- | -- |
| 27.69 | 0.245 | 14.6 | -0.0803 | 0.731 | -0.437 | -- | -- | 0.0951 | 19.6 | 22.5 | 476 | -- | -- |
| 39.53 | 0.293 | 14.7 | -0.865 | -- | -0.131 | -- | -2.44 | -0.12 | -- | 20.2 | 1507 | -- | -- |
| 31.43 | 0.263 | 14.6 | -0.221 | 0.547 | -- | -0.121 | -- | 0.0272 | 20 | -- | -- | -- | -- |
| 31.47 | 0.263 | 14.6 | -0.218 | 0.547 | -- | -- | -- | 0.027 | 20 | -- | -- | -- | -- |
| 42.35 | 0.303 | 14.7 | -0.12 | -- | -0.398 | -- | -- | -0.0741 | -- | 30.1 | 3070 | -- | -- |
| 27.92 | 0.246 | 14.6 | -- | 0.745 | -0.489 | -- | -- | 0.109 | 19.6 | 23.16 | 512 | -- | -- |
| 47.84 | 0.323 | 14.6 | -0.223 | -- | -- | -- | -- | 0.0201 | -- | -- | -- | -- | -- |
| 32.73 | 0.268 | 14.6 | -- | 0.548 | -- | -- | -- | 0.0513 | 20 | -- | -- | -- | -- |
| 41.98 | 0.302 | 14.6 | -- | -- | -0.365 | -- | -- | -0.0176 | -- | 30.8 | 5780 | -- | -- |
| 49.16 | 0.327 | 14.6 | -- | -- | -- | -- | -- | 0.0448 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 21.94 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 18 | 21 |
| 18 | 22.41 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 2 | 21 |
| 41 | 22.49 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 23 | 22 |
| 58 | 22.55 | temperature | 20.0 | 720 | > th | dose dependent | no | NA | NA |
| 85 | 22.68 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 5 | 6 |
| 86 | 22.69 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 6 | 4 |
| 92 | 22.72 | wind | 1.0 | 14400 | < th | dose independent | rect. | 20 | 4 |
| 99 | 22.74 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 18 | 21 |
| 124 | 22.86 | temperature | 30.0 | 720 | < th | dose dependent | rect. | 6 | 19 |
| 128 | 22.87 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 3 | 19 |
| 129 | 22.88 | wind | 1.0 | 14400 | > th | dose independent | rect. | 20 | 3 |
| 157 | 22.94 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 23 | 22 |
| 176 | 23.00 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 20 | 4 |
| 225 | 23.07 | wind | 7.0 | 43200 | < th | dose independent | rect. | 20 | 10 |
| 230 | 23.09 | wind | 7.0 | 43200 | > th | dose independent | rect. | 20 | 10 |
| 254 | 23.13 | temperature | 20.0 | 720 | > th | dose dependent | sin | 1 | NA |
| 279 | 23.16 | temperature | 20.0 | 1440 | > th | dose dependent | sin | 5 | NA |
| 311 | 23.22 | temperature | 25.0 | 720 | > th | dose dependent | sin | 8 | NA |
| 324 | 23.24 | wind | 7.0 | 43200 | > th | dose independent | rect. | 20 | 13 |
| 325 | 23.24 | wind | 5.0 | 43200 | > th | dose dependent | rect. | 20 | 9 |
| 405 | 23.33 | radiation | 1.0 | 4320 | > th | dose dependent | rect. | 6 | 1 |
| 458 | 23.39 | radiation | 40.0 | 4320 | < th | dose dependent | rect. | 21 | 10 |
| 464 | 23.40 | radiation | 20.0 | 4320 | < th | dose dependent | rect. | 6 | 1 |
| 467 | 23.40 | radiation | 40.0 | 4320 | < th | dose dependent | rect. | 23 | 8 |
| 617 | 23.51 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 20 | 1 |
| 659 | 23.53 | temperature | 30.0 | 1440 | < th | dose dependent | rect. | 8 | 1 |
| 661 | 23.53 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 18 | 7 |
| 683 | 23.54 | temperature | 10.0 | 720 | > th | dose dependent | sin | 23 | NA |
| 694 | 23.55 | temperature | 30.0 | 1440 | < th | dose dependent | rect. | 7 | 3 |
| 743 | 23.58 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 20 | 1 |
| 745 | 23.58 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 20 | 1 |
| 746 | 23.58 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 18 | 4 |
| 823 | 23.63 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 20 | 2 |
| 911 | 23.69 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 23 | 1 |
| 924 | 23.70 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 20 | 1 |
| 936 | 23.71 | wind | 5.0 | 43200 | > th | dose dependent | rect. | 21 | 1 |
| 961 | 23.72 | wind | 5.0 | 43200 | > th | dose dependent | sin | 10 | NA |
| 981 | 23.74 | wind | 7.0 | 43200 | > th | dose independent | sin | 10 | NA |
| 998 | 23.75 | wind | 7.0 | 43200 | < th | dose independent | sin | 9 | NA |