Os07g0588700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Zinc finger, C2H2-type domain containing protein.
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Os07g0588700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Zinc finger, C2H2-type domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 196.66 | 0.653 | -3.05 | -13 | 0.0664 | -1160 | 0.249 | -2450 | 0.173 | 6.12 | 15 | 90 | -- | -- |
| 217.87 | 0.693 | 3 | -0.386 | 0.0613 | -0.349 | -0.481 | -- | 0.137 | 12.7 | 15 | 90 | -- | -- |
| 196.81 | 0.653 | -3.05 | -13 | 0.0684 | -1160 | -- | -2450 | 0.173 | 6.62 | 14.99 | 91 | -- | -- |
| 218.51 | 0.693 | 3 | -0.411 | 0.0971 | -0.469 | -- | -- | 0.132 | 9.12 | 15 | 90 | -- | -- |
| 197.05 | 0.654 | -3.05 | -13 | -- | -1160 | -- | -2450 | 0.174 | -- | 14.99 | 91 | -- | -- |
| 218.1 | 0.692 | 3 | -0.371 | 0.0684 | -- | -0.519 | -- | 0.141 | 12.6 | -- | -- | -- | -- |
| 218.94 | 0.693 | 3 | -0.393 | 0.103 | -- | -- | -- | 0.137 | 9.32 | -- | -- | -- | -- |
| 219.06 | 0.692 | 3.01 | -0.412 | -- | -0.508 | -- | -- | 0.132 | -- | 15 | 90 | -- | -- |
| 222.86 | 0.695 | 2.99 | -- | 0.101 | -0.282 | -- | -- | 0.177 | 9.55 | 14.6 | 609 | -- | -- |
| 219.56 | 0.692 | 3 | -0.393 | -- | -- | -- | -- | 0.137 | -- | -- | -- | -- | -- |
| 223 | 0.699 | 2.99 | -- | 0.104 | -- | -- | -- | 0.18 | 9.61 | -- | -- | -- | -- |
| 223.44 | 0.696 | 3 | -- | -- | -0.308 | -- | -- | 0.175 | -- | 14.6 | 608 | -- | -- |
| 223.64 | 0.698 | 2.99 | -- | -- | -- | -- | -- | 0.181 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 195.13 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 9 | 1 |
| 3 | 195.13 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 9 | 1 |
| 7 | 195.31 | wind | 9.0 | 270 | > th | dose independent | rect. | 19 | 15 |
| 10 | 195.49 | wind | 9.0 | 270 | > th | dose dependent | rect. | 20 | 15 |
| 15 | 195.66 | wind | 7.0 | 720 | > th | dose dependent | rect. | 3 | 5 |
| 17 | 195.70 | temperature | 15.0 | 4320 | < th | dose dependent | rect. | 15 | 3 |
| 20 | 195.71 | temperature | 15.0 | 4320 | < th | dose dependent | rect. | 5 | 13 |
| 21 | 195.72 | temperature | 20.0 | 90 | < th | dose dependent | rect. | 12 | 4 |
| 25 | 195.74 | temperature | 20.0 | 10 | < th | dose dependent | rect. | 12 | 5 |
| 29 | 195.77 | wind | 9.0 | 270 | > th | dose dependent | sin | 8 | NA |
| 30 | 195.78 | temperature | 15.0 | 4320 | < th | dose dependent | rect. | 12 | 6 |
| 43 | 195.90 | humidity | 90.0 | 1440 | > th | dose independent | rect. | 11 | 1 |
| 48 | 195.92 | humidity | 90.0 | 1440 | > th | dose dependent | rect. | 11 | 1 |
| 49 | 195.93 | wind | 9.0 | 720 | > th | dose independent | rect. | 1 | 9 |
| 54 | 195.95 | temperature | 15.0 | 4320 | < th | dose dependent | rect. | 11 | 2 |
| 61 | 195.98 | wind | 7.0 | 720 | > th | dose dependent | rect. | 7 | 1 |
| 69 | 195.99 | wind | 7.0 | 720 | > th | dose independent | rect. | 2 | 6 |
| 79 | 196.02 | temperature | 20.0 | 90 | < th | dose independent | rect. | 12 | 4 |
| 91 | 196.07 | temperature | 15.0 | 4320 | < th | dose dependent | rect. | 6 | 1 |
| 99 | 196.09 | wind | 9.0 | 720 | > th | dose independent | rect. | 9 | 1 |
| 113 | 196.10 | temperature | 15.0 | 4320 | < th | dose dependent | rect. | 5 | 5 |
| 114 | 196.11 | temperature | 15.0 | 4320 | < th | dose independent | rect. | 12 | 1 |
| 115 | 196.11 | wind | 9.0 | 270 | > th | dose independent | rect. | 19 | 17 |
| 149 | 196.23 | wind | 9.0 | 720 | > th | dose dependent | rect. | 1 | 9 |
| 160 | 196.27 | temperature | 15.0 | 720 | < th | dose independent | sin | 21 | NA |
| 161 | 196.27 | temperature | 15.0 | 1440 | < th | dose independent | sin | 23 | NA |
| 162 | 196.27 | temperature | 15.0 | 4320 | < th | dose independent | rect. | 14 | 3 |
| 164 | 196.28 | temperature | 15.0 | 1440 | < th | dose dependent | sin | 23 | NA |
| 171 | 196.32 | atmosphere | 1015.0 | 1440 | < th | dose independent | rect. | 16 | 2 |
| 175 | 196.33 | temperature | 15.0 | 4320 | < th | dose dependent | rect. | 20 | 1 |
| 180 | 196.35 | temperature | 15.0 | 4320 | > th | dose independent | rect. | 15 | 1 |
| 182 | 196.35 | wind | 9.0 | 720 | > th | dose dependent | rect. | 9 | 1 |
| 200 | 196.37 | temperature | 15.0 | 720 | < th | dose independent | rect. | 2 | 1 |
| 207 | 196.37 | temperature | 20.0 | 10 | < th | dose independent | rect. | 9 | 5 |
| 215 | 196.37 | temperature | 15.0 | 720 | < th | dose dependent | rect. | 2 | 1 |
| 224 | 196.38 | wind | 9.0 | 270 | > th | dose independent | sin | 8 | NA |
| 243 | 196.41 | humidity | 90.0 | 270 | > th | dose dependent | rect. | 10 | 2 |
| 255 | 196.43 | precipitation | 0.1 | 720 | > th | dose independent | rect. | 6 | 1 |
| 257 | 196.43 | precipitation | 0.1 | 720 | > th | dose dependent | rect. | 6 | 1 |
| 268 | 196.44 | temperature | 15.0 | 720 | < th | dose independent | rect. | 5 | 19 |
| 279 | 196.46 | temperature | 20.0 | 90 | < th | dose dependent | rect. | 8 | 3 |
| 289 | 196.47 | temperature | 20.0 | 10 | < th | dose dependent | rect. | 6 | 11 |
| 325 | 196.51 | temperature | 20.0 | 10 | < th | dose dependent | rect. | 8 | 9 |
| 329 | 196.53 | temperature | 20.0 | 10 | < th | dose independent | rect. | 9 | 3 |
| 362 | 196.55 | temperature | 15.0 | 720 | < th | dose dependent | rect. | 24 | 7 |
| 380 | 196.56 | wind | 9.0 | 270 | > th | dose dependent | rect. | 11 | 2 |
| 428 | 196.60 | humidity | 90.0 | 270 | > th | dose independent | rect. | 11 | 1 |
| 494 | 196.66 | temperature | 15.0 | 90 | > th | dose independent | sin | 23 | NA |
| 496 | 196.66 | temperature | 15.0 | 90 | > th | dose independent | no | NA | NA |
| 498 | 196.66 | temperature | 15.0 | 90 | < th | dose independent | sin | 7 | NA |
| 546 | 196.66 | temperature | 15.0 | 90 | < th | dose independent | no | NA | NA |
| 548 | 196.66 | temperature | 15.0 | 1440 | < th | dose independent | rect. | 5 | 1 |
| 550 | 196.66 | temperature | 15.0 | 1440 | < th | dose independent | rect. | 9 | 1 |
| 553 | 196.66 | atmosphere | 1015.0 | 1440 | > th | dose independent | rect. | 1 | 1 |