BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os07g0588700 Os07g0588700|AY395294
(226 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G49930.1 | chr3:18510246-18510893 FORWARD LENGTH=216 89 3e-18
AT1G27730.1 | chr1:9648302-9648985 REVERSE LENGTH=228 87 8e-18
AT5G43170.1 | chr5:17331050-17331631 REVERSE LENGTH=194 83 1e-16
AT3G19580.1 | chr3:6803293-6804114 REVERSE LENGTH=274 79 2e-15
AT5G04340.1 | chr5:1216321-1217037 REVERSE LENGTH=239 79 2e-15
AT5G67450.1 | chr5:26919142-26919879 REVERSE LENGTH=246 75 3e-14
AT1G49900.1 | chr1:18474108-18477643 REVERSE LENGTH=918 73 1e-13
AT5G61470.1 | chr5:24722870-24723784 FORWARD LENGTH=305 72 2e-13
AT3G46080.1 | chr3:16922753-16923247 REVERSE LENGTH=165 67 8e-12
AT1G02030.1 | chr1:355385-356188 REVERSE LENGTH=268 65 3e-11
AT2G45120.1 | chr2:18603680-18604624 FORWARD LENGTH=315 65 4e-11
AT2G17180.1 | chr2:7476835-7477647 REVERSE LENGTH=271 65 4e-11
AT5G59820.1 | chr5:24103073-24103561 FORWARD LENGTH=163 63 1e-10
AT3G60580.1 | chr3:22394007-22394873 FORWARD LENGTH=289 63 1e-10
AT2G37430.1 | chr2:15706454-15706990 FORWARD LENGTH=179 62 2e-10
AT5G04390.1 | chr5:1239166-1240254 FORWARD LENGTH=363 62 3e-10
AT3G53600.1 | chr3:19875532-19876059 FORWARD LENGTH=176 62 3e-10
AT3G46090.1 | chr3:16926304-16926810 REVERSE LENGTH=169 61 6e-10
AT2G28710.1 | chr2:12322974-12323444 FORWARD LENGTH=157 60 7e-10
AT4G35280.1 | chr4:16787429-16788283 REVERSE LENGTH=285 60 8e-10
AT3G46070.1 | chr3:16920445-16920957 REVERSE LENGTH=171 59 2e-09
AT3G29340.1 | chr3:11259587-11262440 REVERSE LENGTH=651 50 9e-07
>AT3G49930.1 | chr3:18510246-18510893 FORWARD LENGTH=216
Length = 215
Score = 88.6 bits (218), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 58/132 (43%), Positives = 68/132 (51%), Gaps = 29/132 (21%)
Query: 50 SEEEYLATSLLMLAHGIRDETKDIRGMGDVKGVGVD--TLELVKPSQRAYECSVCGKVYW 107
SEEEYLA LLMLA RG D D +L + Q+ Y+CSVCGK +
Sbjct: 55 SEEEYLALCLLMLA----------RGSSDHHSPPSDHHSLSPLSDHQKDYKCSVCGKSFP 104
Query: 108 CYQALGGHMTCHRNLFAQVVAGDELSSDRTMVVKG-------------HKCSICRLEFPS 154
YQALGGH T HR + V+ D +S+ T+ G H CSIC FPS
Sbjct: 105 SYQALGGHKTSHR----KPVSVDVNNSNGTVTNNGNISNGLVGQSGKTHNCSICFKSFPS 160
Query: 155 GQALGGHMRVHY 166
GQALGGH R HY
Sbjct: 161 GQALGGHKRCHY 172
>AT1G27730.1 | chr1:9648302-9648985 REVERSE LENGTH=228
Length = 227
Score = 87.0 bits (214), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 70/227 (30%), Positives = 91/227 (40%), Gaps = 30/227 (13%)
Query: 13 SPTPVDFRAHQVFPSKHHDFDTSKSRNISGSVAIGSDSEEEYLATSLLMLAHGIRDETKD 72
SP P F VF H +S+ + +EEEYLA L++LA R
Sbjct: 13 SPIPPLFEDSSVFHGVEHWTKGKRSKRSRSDFHHQNLTEEEYLAFCLMLLARDNRQPPPP 72
Query: 73 IRGMGDVKGVGVDTLELVKPSQRAYECSVCGKVYWCYQALGGHMTCHRNLFAQVVAG--- 129
V+ L +Y+CSVC K + YQALGGH HR +Q ++G
Sbjct: 73 ---------PAVEKL--------SYKCSVCDKTFSSYQALGGHKASHRKNLSQTLSGGGD 115
Query: 130 -------DELSSDRTMVVKGHKCSICRLEFPSGQALGGHMRVHYXXXXXXXXXXXXXXXX 182
S+ T K H C+IC FPSGQALGGH R HY
Sbjct: 116 DHSTSSATTTSAVTTGSGKSHVCTICNKSFPSGQALGGHKRCHYEGNNNINTSSVSNSEG 175
Query: 183 XXXXGALKLVLKDFDLNVPVVA--TMV-GDEAESSHSEAKARMMTLP 226
+ + FDLN+P + +MV GD+ S AK P
Sbjct: 176 AGSTSHVSSSHRGFDLNIPPIPEFSMVNGDDEVMSPMPAKKPRFDFP 222
>AT5G43170.1 | chr5:17331050-17331631 REVERSE LENGTH=194
Length = 193
Score = 82.8 bits (203), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 51/117 (43%), Positives = 63/117 (53%), Gaps = 20/117 (17%)
Query: 50 SEEEYLATSLLMLAHGIRDETKDIRGMGDVKGVGVDTLELVKPSQRAYECSVCGKVYWCY 109
+EEEYLA L++LA R GD+ V V KPS Y+C VC K + Y
Sbjct: 45 TEEEYLAFCLMLLA----------RDGGDLDSVTVAE----KPS---YKCGVCYKTFSSY 87
Query: 110 QALGGHMTCHRNLFAQVVAGDELSSDRTMVVKGHKCSICRLEFPSGQALGGHMRVHY 166
QALGGH HR+L+ G+ S + VK H CS+C F +GQALGGH R HY
Sbjct: 88 QALGGHKASHRSLYG---GGENDKSTPSTAVKSHVCSVCGKSFATGQALGGHKRCHY 141
>AT3G19580.1 | chr3:6803293-6804114 REVERSE LENGTH=274
Length = 273
Score = 79.0 bits (193), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/133 (37%), Positives = 66/133 (49%), Gaps = 26/133 (19%)
Query: 50 SEEEYLATSLLMLAHGIRDETKDIRGMGDVKGVGVDTLELVKPSQR---AYECSVCGKVY 106
+EEEYLA LLMLA +D+ R + L P + Y+C+VC K +
Sbjct: 66 TEEEYLALCLLMLA---KDQPSQTRFHQQSQS-------LTPPPESKNLPYKCNVCEKAF 115
Query: 107 WCYQALGGHMTCHRNLFAQVVA--GDELSSDRTMVVKG-----------HKCSICRLEFP 153
YQALGGH HR V++ D+ ++ +V G H+CSIC FP
Sbjct: 116 PSYQALGGHKASHRIKPPTVISTTADDSTAPTISIVAGEKHPIAASGKIHECSICHKVFP 175
Query: 154 SGQALGGHMRVHY 166
+GQALGGH R HY
Sbjct: 176 TGQALGGHKRCHY 188
>AT5G04340.1 | chr5:1216321-1217037 REVERSE LENGTH=239
Length = 238
Score = 78.6 bits (192), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/195 (32%), Positives = 85/195 (43%), Gaps = 24/195 (12%)
Query: 50 SEEEYLATSLLMLAH-GIRDETKDIRGMGDVKGVGVDTLELVKPSQRAYECSVCGKVYWC 108
+E+EY+A L++LA G R+ D+ + + Y+CSVC K +
Sbjct: 47 TEDEYIALCLMLLARDGDRNRDLDLPSSSSSPPLLPPLPTPI------YKCSVCDKAFSS 100
Query: 109 YQALGGHMTCHRNLFA--QVVAGDELSSDRTMV-----------VKGHKCSICRLEFPSG 155
YQALGGH HR F+ Q GDELS+ + VK H CSIC F +G
Sbjct: 101 YQALGGHKASHRKSFSLTQSAGGDELSTSSAITTSGISGGGGGSVKSHVCSICHKSFATG 160
Query: 156 QALGGHMRVHYXXXXXXXXXXXXXXXXXXXXGA-LKLVLKDFDLNVPVVA--TMV-GDEA 211
QALGGH R HY + + + FDLN+P + +MV GDE
Sbjct: 161 QALGGHKRCHYEGKNGGGVSSSVSNSEDVGSTSHVSSGHRGFDLNIPPIPEFSMVNGDEE 220
Query: 212 ESSHSEAKARMMTLP 226
S AK P
Sbjct: 221 VMSPMPAKKLRFDFP 235
>AT5G67450.1 | chr5:26919142-26919879 REVERSE LENGTH=246
Length = 245
Score = 75.1 bits (183), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/139 (38%), Positives = 65/139 (46%), Gaps = 32/139 (23%)
Query: 50 SEEEYLATSLLMLAHGIRDETKDIRGMGDVKGVGVDTLELVKPS-QRAYECSVCGKVYWC 108
SEEEYLA LLMLA RG PS R Y+C+VCGK +
Sbjct: 59 SEEEYLALCLLMLA----------RGSAVQSPPLPPLPSRASPSDHRDYKCTVCGKSFSS 108
Query: 109 YQALGGHMTCHRN-LFAQVVAGDE------LSSDRTMVV--------------KGHKCSI 147
YQALGGH T HR + +G++ S+ ++V+ K H CSI
Sbjct: 109 YQALGGHKTSHRKPTNTSITSGNQELSNNSHSNSGSVVINVTVNTGNGVSQSGKIHTCSI 168
Query: 148 CRLEFPSGQALGGHMRVHY 166
C F SGQALGGH R HY
Sbjct: 169 CFKSFASGQALGGHKRCHY 187
>AT1G49900.1 | chr1:18474108-18477643 REVERSE LENGTH=918
Length = 917
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 44/77 (57%), Gaps = 2/77 (2%)
Query: 92 PSQRAYECSVCGKVYWCYQALGGHMTCHRNLFAQVVAGDELSSDRTMVVKG--HKCSICR 149
P +Y+C+VCG+ YQALGGH HR A E + + G HKCSIC
Sbjct: 745 PKSDSYQCNVCGRELPSYQALGGHKASHRTKPPVENATGEKMRPKKLAPSGKIHKCSICH 804
Query: 150 LEFPSGQALGGHMRVHY 166
EF +GQ+LGGH R+HY
Sbjct: 805 REFSTGQSLGGHKRLHY 821
Score = 71.6 bits (174), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 46/81 (56%), Gaps = 6/81 (7%)
Query: 92 PSQRAYECSVCGKVYWCYQALGGHMTCHRNLFAQV--VAGDELSSDRTMVV----KGHKC 145
P ++CS+C KV+ YQALGGH H AQ+ D R+ ++ K HKC
Sbjct: 188 PKSDLFKCSICEKVFTSYQALGGHKASHSIKAAQLENAGADAGEKTRSKMLSPSGKIHKC 247
Query: 146 SICRLEFPSGQALGGHMRVHY 166
IC + FP+GQALGGH R HY
Sbjct: 248 DICHVLFPTGQALGGHKRRHY 268
>AT5G61470.1 | chr5:24722870-24723784 FORWARD LENGTH=305
Length = 304
Score = 72.4 bits (176), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 42/73 (57%)
Query: 94 QRAYECSVCGKVYWCYQALGGHMTCHRNLFAQVVAGDELSSDRTMVVKGHKCSICRLEFP 153
Q Y C CGKV YQALGGH T H+ ++ + D +V + ++C IC F
Sbjct: 225 QSKYTCDTCGKVLRSYQALGGHRTSHKYKRLKISDKNYFGEDGPIVRRQYECQICNRMFA 284
Query: 154 SGQALGGHMRVHY 166
SGQALGGH ++HY
Sbjct: 285 SGQALGGHKKIHY 297
>AT3G46080.1 | chr3:16922753-16923247 REVERSE LENGTH=165
Length = 164
Score = 67.0 bits (162), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 40/74 (54%), Gaps = 2/74 (2%)
Query: 94 QRAYECSVCGKVYWCYQALGGHMTCHRNLFAQVVAG--DELSSDRTMVVKGHKCSICRLE 151
+R + C C K + +QALGGH H+ L LS+ +T H C IC +E
Sbjct: 34 KRVFRCKTCLKEFSSFQALGGHRASHKKLINSSDPSLLGSLSNKKTKTATSHPCPICGVE 93
Query: 152 FPSGQALGGHMRVH 165
FP GQALGGHMR H
Sbjct: 94 FPMGQALGGHMRRH 107
>AT1G02030.1 | chr1:355385-356188 REVERSE LENGTH=268
Length = 267
Score = 65.1 bits (157), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 41/78 (52%), Gaps = 3/78 (3%)
Query: 91 KPSQRAYECSVCGKVYWCYQALGGHMTCHRNLFAQV--VAGDELSSDRTMVVKG-HKCSI 147
K + +EC C KV+ YQALGGH H+ A+ + DEL + H+C I
Sbjct: 154 KKRNKWFECETCEKVFKSYQALGGHRASHKKKIAETDQLGSDELKKKKKKSTSSHHECPI 213
Query: 148 CRLEFPSGQALGGHMRVH 165
C F SGQALGGH R H
Sbjct: 214 CAKVFTSGQALGGHKRSH 231
>AT2G45120.1 | chr2:18603680-18604624 FORWARD LENGTH=315
Length = 314
Score = 64.7 bits (156), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 41/118 (34%), Positives = 60/118 (50%), Gaps = 4/118 (3%)
Query: 52 EEYLATSLLMLAHGIRDETKDIRGMGDVKGVGVDTLELVKPSQRA-YECSVCGKVYWCYQ 110
EE LA L+ML+ + K + + D+ + R ++C CGKV+ YQ
Sbjct: 148 EEDLAFCLIMLSRDKWKQQKKKKQRVEEDETDHDSEDYKSSKSRGRFKCETCGKVFKSYQ 207
Query: 111 ALGGHMTCHRNLFAQVVAGDELSSDRTMVVKG---HKCSICRLEFPSGQALGGHMRVH 165
ALGGH H+ A + +++ ++ + VK H+C IC F SGQALGGH R H
Sbjct: 208 ALGGHRASHKKNKACMTKTEQVETEYVLGVKEKKVHECPICFRVFTSGQALGGHKRSH 265
>AT2G17180.1 | chr2:7476835-7477647 REVERSE LENGTH=271
Length = 270
Score = 64.7 bits (156), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 46/135 (34%), Positives = 66/135 (48%), Gaps = 37/135 (27%)
Query: 50 SEEEY-LATSLLMLAHGIRDETKDIRGMGDVKGVGVDTLELVKPSQRAYECSVCGKVYWC 108
SEEE+ +A+ LLM+A+G DV + E +EC C KV+
Sbjct: 119 SEEEHNIASCLLMMANG------------DVPTRSSEVEE-------RFECDGCKKVFGS 159
Query: 109 YQALGGHMTCHRNL---FA--------------QVVAGDELSSDRTMVVKGHKCSICRLE 151
+QALGGH H+++ FA ++V D+ S + + H+C+IC
Sbjct: 160 HQALGGHRATHKDVKGCFANKNITEDPPPPPPQEIVDQDKGKSVKLVSGMNHRCNICSRV 219
Query: 152 FPSGQALGGHMRVHY 166
F SGQALGGHMR H+
Sbjct: 220 FSSGQALGGHMRCHW 234
>AT5G59820.1 | chr5:24103073-24103561 FORWARD LENGTH=163
Length = 162
Score = 62.8 bits (151), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 40/74 (54%), Gaps = 7/74 (9%)
Query: 94 QRAYECSVCGKVYWCYQALGGHMTCHRNLFAQVVAGDELSSDRTMVVK--GHKCSICRLE 151
+R + C C K + +QALGGH H+ D LSS VK H C IC +E
Sbjct: 36 KRVFTCKTCLKQFHSFQALGGHRASHKK-----PNNDALSSGLMKKVKTSSHPCPICGVE 90
Query: 152 FPSGQALGGHMRVH 165
FP GQALGGHMR H
Sbjct: 91 FPMGQALGGHMRRH 104
>AT3G60580.1 | chr3:22394007-22394873 FORWARD LENGTH=289
Length = 288
Score = 62.8 bits (151), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/74 (44%), Positives = 41/74 (55%), Gaps = 5/74 (6%)
Query: 97 YECSVCGKVYWCYQALGGHMTCHRNLFAQVVAGDELSS---DRTMVV--KGHKCSICRLE 151
Y+C CGKV+ YQALGGH H+ ++ S D +VV + H+C IC
Sbjct: 173 YKCETCGKVFKSYQALGGHRASHKKNRVSNNKTEQRSETEYDNVVVVAKRIHECPICLRV 232
Query: 152 FPSGQALGGHMRVH 165
F SGQALGGH R H
Sbjct: 233 FASGQALGGHKRSH 246
>AT2G37430.1 | chr2:15706454-15706990 FORWARD LENGTH=179
Length = 178
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/92 (42%), Positives = 49/92 (53%), Gaps = 10/92 (10%)
Query: 79 VKGVGVDTLELVKPSQRAYECSVCGKVYWCYQALGGHMTCHRNLFAQVVAGD--ELSSDR 136
VK +G++ S + +EC C K + +QALGGH H+ V D LS+D
Sbjct: 30 VKQIGLNQHTESHTSNQ-FECKTCNKRFSSFQALGGHRASHKKPKLTVEQKDVKHLSND- 87
Query: 137 TMVVKG---HKCSICRLEFPSGQALGGHMRVH 165
KG HKCSIC F +GQALGGHMR H
Sbjct: 88 ---YKGNHFHKCSICSQSFGTGQALGGHMRRH 116
>AT5G04390.1 | chr5:1239166-1240254 FORWARD LENGTH=363
Length = 362
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 46/99 (46%), Gaps = 30/99 (30%)
Query: 97 YECSVCGKVYWCYQALGGHMTCHR-----------NLFAQVVAGDELS------------ 133
Y+C C + + +QALGGH H+ +L A D +S
Sbjct: 153 YQCKTCDRTFPSFQALGGHRASHKKPKAASFYSNLDLKKNTYANDAVSLVHTTTTVFKNN 212
Query: 134 SDRTMVVKG-------HKCSICRLEFPSGQALGGHMRVH 165
+ R++VV G H+C IC EF SGQALGGHMR H
Sbjct: 213 NSRSLVVYGKASKNKVHECGICGAEFTSGQALGGHMRRH 251
>AT3G53600.1 | chr3:19875532-19876059 FORWARD LENGTH=176
Length = 175
Score = 61.6 bits (148), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 38/69 (55%), Gaps = 2/69 (2%)
Query: 97 YECSVCGKVYWCYQALGGHMTCHRNLFAQVVAGDELSSDRTMVVKGHKCSICRLEFPSGQ 156
+EC C + + +QALGGH H+ +++ E R HKC+IC F +GQ
Sbjct: 49 FECKTCNRKFDSFQALGGHRASHKK--PKLIVDQEQVKHRNKENDMHKCTICDQMFGTGQ 106
Query: 157 ALGGHMRVH 165
ALGGHMR H
Sbjct: 107 ALGGHMRKH 115
>AT3G46090.1 | chr3:16926304-16926810 REVERSE LENGTH=169
Length = 168
Score = 60.8 bits (146), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 42/75 (56%), Gaps = 6/75 (8%)
Query: 94 QRAYECSVCGKVYWCYQALGGHMTCHRNLFAQ---VVAGDELSSDRTMVVKGHKCSICRL 150
+R + C C K + +QALGGH H+ L + G LS+ +T H C IC +
Sbjct: 37 ERVFRCKTCLKEFSSFQALGGHRASHKKLINSDNPSLLGS-LSNKKTKT--SHPCPICGV 93
Query: 151 EFPSGQALGGHMRVH 165
+FP GQALGGHMR H
Sbjct: 94 KFPMGQALGGHMRRH 108
>AT2G28710.1 | chr2:12322974-12323444 FORWARD LENGTH=157
Length = 156
Score = 60.5 bits (145), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 38/71 (53%), Gaps = 2/71 (2%)
Query: 95 RAYECSVCGKVYWCYQALGGHMTCHRNLFAQVVAGDELSSDRTMVVKGHKCSICRLEFPS 154
R + C C K + +QALGGH HR + + G S + + H+C IC EF
Sbjct: 32 RVFACKTCNKEFPSFQALGGHRASHRR--SAALEGHAPPSPKRVKPVKHECPICGAEFAV 89
Query: 155 GQALGGHMRVH 165
GQALGGHMR H
Sbjct: 90 GQALGGHMRKH 100
>AT4G35280.1 | chr4:16787429-16788283 REVERSE LENGTH=285
Length = 284
Score = 60.5 bits (145), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 45/132 (34%), Positives = 62/132 (46%), Gaps = 37/132 (28%)
Query: 50 SEEEY-LATSLLMLAHGIRDETKDIRGMGDVKGVGVDTLELVKPSQRAYECSVCGKVYWC 108
SEE++ +A+ LLML++G + R +EC C KV+
Sbjct: 136 SEEDHEVASCLLMLSNGTPSSSSIER----------------------FECGGCKKVFGS 173
Query: 109 YQALGGHMTCHRNL---FAQVVAGDELSSDRT----------MVVKGH-KCSICRLEFPS 154
+QALGGH H+N+ FA D+ + T + GH KC+IC F S
Sbjct: 174 HQALGGHRASHKNVKGCFAITNVTDDPMTVSTSSGHDHQGKILTFSGHHKCNICFRVFSS 233
Query: 155 GQALGGHMRVHY 166
GQALGGHMR H+
Sbjct: 234 GQALGGHMRCHW 245
>AT3G46070.1 | chr3:16920445-16920957 REVERSE LENGTH=171
Length = 170
Score = 58.5 bits (140), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 37/76 (48%), Gaps = 4/76 (5%)
Query: 94 QRAYECSVCGKVYWCYQALGGHMTCHRNLF----AQVVAGDELSSDRTMVVKGHKCSICR 149
+R + C C + + +QALGGH H L + + T H C IC
Sbjct: 33 KRVFRCKTCERDFDSFQALGGHRASHSKLTNSDDKSLPGSPKKKPKTTTTTTAHTCPICG 92
Query: 150 LEFPSGQALGGHMRVH 165
LEFP GQALGGHMR H
Sbjct: 93 LEFPMGQALGGHMRKH 108
>AT3G29340.1 | chr3:11259587-11262440 REVERSE LENGTH=651
Length = 650
Score = 50.1 bits (118), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 48/92 (52%), Gaps = 9/92 (9%)
Query: 83 GVDTLELVKPSQRAYECSVCGKVYWCYQALGGHMTCHRNLFAQVVAGD--ELSSDRTMVV 140
GV L S+ +++C +CGK + CYQALGGH HR + ++ + E+ ++ +
Sbjct: 29 GVIALRSNLQSKSSHKCKICGKSFECYQALGGHQRIHRPIKEKLSKQEFSEVYPRKSKLQ 88
Query: 141 KG-------HKCSICRLEFPSGQALGGHMRVH 165
K ++C +C F + LGGH ++H
Sbjct: 89 KRPESSSSCYECKVCGKIFGCYRGLGGHTKLH 120
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.319 0.134 0.405
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 4,517,495
Number of extensions: 169915
Number of successful extensions: 676
Number of sequences better than 1.0e-05: 22
Number of HSP's gapped: 612
Number of HSP's successfully gapped: 23
Length of query: 226
Length of database: 11,106,569
Length adjustment: 95
Effective length of query: 131
Effective length of database: 8,502,049
Effective search space: 1113768419
Effective search space used: 1113768419
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 110 (47.0 bits)