FiT-DB / Search/ Help/ Sample detail
|
Os07g0587400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Similar to Eukaryotic peptide chain release factor subunit 1-3 (eRF1-3) (Eukaryotic release factor 1-3) (Omnipotent suppressor protein 1 homolog 3) (SUP1 homolog 3).
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = precipitation,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 16.51 | 0.191 | 14.4 | 0.752 | 0.747 | 0.33 | -0.257 | 0.803 | 0.228 | 20.3 | 0.4995 | 4978 | -- | -- |
| 16.98 | 0.192 | 14.4 | 0.718 | 0.75 | 0.306 | -0.232 | -- | 0.219 | 20.3 | 1 | 5053 | -- | -- |
| 16.71 | 0.19 | 14.4 | 0.758 | 0.747 | 0.326 | -- | 0.804 | 0.228 | 20.3 | 0.4875 | 4969 | -- | -- |
| 17.16 | 0.193 | 14.4 | 0.727 | 0.753 | 0.319 | -- | -- | 0.225 | 20.3 | 1 | 5015 | -- | -- |
| 47.46 | 0.321 | 14.4 | 0.783 | -- | 0.327 | -- | 0.936 | 0.23 | -- | 0.4991 | 5453 | -- | -- |
| 18.83 | 0.203 | 14.4 | 0.646 | 0.748 | -- | -0.251 | -- | 0.258 | 20.3 | -- | -- | -- | -- |
| 19.03 | 0.204 | 14.4 | 0.654 | 0.748 | -- | -- | -- | 0.258 | 20.3 | -- | -- | -- | -- |
| 48.09 | 0.323 | 14.4 | 0.706 | -- | 0.329 | -- | -- | 0.206 | -- | 0.8013 | 5460 | -- | -- |
| 28.59 | 0.249 | 14.5 | -- | 0.725 | 0.259 | -- | -- | 0.127 | 20.3 | 0.4235 | 13959 | -- | -- |
| 50.11 | 0.331 | 14.4 | 0.649 | -- | -- | -- | -- | 0.25 | -- | -- | -- | -- | -- |
| 30.29 | 0.257 | 14.4 | -- | 0.745 | -- | -- | -- | 0.185 | 20.4 | -- | -- | -- | -- |
| 59.14 | 0.358 | 14.4 | -- | -- | 0.262 | -- | -- | 0.124 | -- | 4.481e-05 | 13966 | -- | -- |
| 61.22 | 0.365 | 14.4 | -- | -- | -- | -- | -- | 0.178 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 15.89 | wind | 3.0 | 14400 | > th | dose dependent | rect. | 20 | 13 |
| 3 | 15.94 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 21 | 7 |
| 6 | 15.95 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 7 | 10 |
| 9 | 15.96 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 7 | 10 |
| 10 | 15.96 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 7 | 10 |
| 12 | 15.97 | wind | 3.0 | 14400 | > th | dose independent | rect. | 23 | 2 |
| 13 | 15.97 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 10 | 7 |
| 17 | 15.97 | wind | 7.0 | 14400 | < th | dose dependent | rect. | 21 | 7 |
| 22 | 15.98 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 10 | 7 |
| 25 | 15.98 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 10 | 7 |
| 35 | 16.02 | wind | 3.0 | 14400 | < th | dose independent | rect. | 23 | 2 |
| 42 | 16.04 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 13 | 4 |
| 44 | 16.05 | wind | 3.0 | 14400 | > th | dose independent | rect. | 21 | 4 |
| 60 | 16.08 | temperature | 20.0 | 14400 | < th | dose independent | rect. | 19 | 2 |
| 81 | 16.11 | wind | 3.0 | 14400 | < th | dose independent | rect. | 21 | 4 |
| 83 | 16.11 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 7 | 10 |
| 85 | 16.12 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 24 | 1 |
| 86 | 16.12 | wind | 9.0 | 14400 | < th | dose dependent | rect. | 24 | 1 |
| 87 | 16.12 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 15 | 3 |
| 93 | 16.14 | temperature | 20.0 | 14400 | > th | dose independent | rect. | 18 | 1 |
| 95 | 16.14 | wind | 3.0 | 14400 | > th | dose dependent | rect. | 7 | 2 |
| 106 | 16.16 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 17 | 1 |
| 107 | 16.16 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 17 | 1 |
| 120 | 16.17 | wind | 7.0 | 14400 | < th | dose dependent | rect. | 24 | 3 |
| 124 | 16.17 | humidity | 90.0 | 4320 | > th | dose dependent | rect. | 7 | 8 |
| 126 | 16.18 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 127 | 16.18 | wind | 3.0 | 14400 | > th | dose dependent | sin | 9 | NA |
| 142 | 16.20 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 12 | 6 |
| 146 | 16.20 | humidity | 80.0 | 14400 | > th | dose dependent | rect. | 11 | 8 |
| 150 | 16.20 | humidity | 90.0 | 4320 | > th | dose dependent | rect. | 7 | 11 |
| 153 | 16.21 | wind | 3.0 | 14400 | > th | dose independent | rect. | 21 | 7 |
| 172 | 16.22 | humidity | 90.0 | 4320 | < th | dose independent | rect. | 7 | 11 |
| 176 | 16.22 | humidity | 90.0 | 4320 | > th | dose dependent | rect. | 7 | 4 |
| 197 | 16.24 | wind | 1.0 | 14400 | < th | dose independent | rect. | 21 | 9 |
| 199 | 16.24 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 17 | 1 |
| 248 | 16.28 | humidity | 90.0 | 4320 | > th | dose independent | rect. | 7 | 12 |
| 272 | 16.30 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 12 | 5 |
| 281 | 16.31 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 15 | 5 |
| 294 | 16.32 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 14 | 1 |
| 320 | 16.33 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 14 | 3 |
| 334 | 16.34 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 16 | 1 |
| 338 | 16.34 | wind | 3.0 | 4320 | > th | dose independent | rect. | 21 | 12 |
| 339 | 16.34 | wind | 3.0 | 4320 | < th | dose independent | rect. | 21 | 12 |
| 352 | 16.35 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 14 | 1 |
| 379 | 16.36 | wind | 1.0 | 14400 | < th | dose independent | rect. | 19 | 11 |
| 468 | 16.40 | temperature | 25.0 | 14400 | < th | dose dependent | rect. | 16 | 1 |
| 508 | 16.42 | precipitation | 0.1 | 4320 | > th | dose independent | sin | 0 | NA |
| 536 | 16.43 | precipitation | 0.1 | 4320 | < th | dose independent | sin | 0 | NA |
| 552 | 16.43 | precipitation | 0.1 | 4320 | < th | dose dependent | sin | 0 | NA |
| 573 | 16.44 | wind | 5.0 | 14400 | < th | dose independent | rect. | 7 | 1 |
| 583 | 16.44 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 14 | 8 |
| 641 | 16.46 | humidity | 90.0 | 4320 | < th | dose independent | rect. | 8 | 7 |
| 681 | 16.47 | wind | 9.0 | 14400 | < th | dose dependent | sin | 9 | NA |
| 699 | 16.48 | wind | 5.0 | 14400 | > th | dose independent | rect. | 7 | 1 |
| 823 | 16.52 | humidity | 90.0 | 4320 | > th | dose independent | rect. | 7 | 8 |
| 830 | 16.52 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 5 | 16 |
| 832 | 16.52 | humidity | 90.0 | 1440 | > th | dose dependent | sin | 22 | NA |
| 891 | 16.54 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 5 | 16 |
| 909 | 16.54 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 5 | 16 |
| 938 | 16.55 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 22 | 8 |
| 956 | 16.56 | humidity | 90.0 | 4320 | > th | dose independent | sin | 23 | NA |
| 976 | 16.56 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 20 | 1 |
