Os07g0587200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os07g0587200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 252.48 | 0.747 | 5.65 | -1.48 | 1.94 | -5.07 | -0.127 | -7.49 | -0.609 | 1.28 | 20.1 | 5204 | -- | -- |
| 262.94 | 0.761 | 5.81 | -0.914 | 2.3 | -1.98 | -0.21 | -- | -0.523 | 1.22 | 23.04 | 1543 | -- | -- |
| 252.45 | 0.74 | 5.64 | -1.49 | 1.94 | -5.25 | -- | -7.83 | -0.607 | 1.29 | 19.89 | 5190 | -- | -- |
| 258.02 | 0.748 | 5.84 | -1.3 | 1.95 | -1.88 | -- | -- | -0.655 | 1.36 | 23.16 | 2204 | -- | -- |
| 480.3 | 1.02 | 5.61 | -1.32 | -- | -5.03 | -- | -7.38 | -0.574 | -- | 19.95 | 3846 | -- | -- |
| 311 | 0.827 | 5.74 | -0.509 | 2.01 | -- | -0.135 | -- | -0.263 | 1.28 | -- | -- | -- | -- |
| 311.08 | 0.826 | 5.74 | -0.505 | 2.01 | -- | -- | -- | -0.263 | 1.29 | -- | -- | -- | -- |
| 443.84 | 0.981 | 5.86 | -1.22 | -- | -2.7 | -- | -- | -0.845 | -- | 27 | 954 | -- | -- |
| 283.13 | 0.788 | 5.77 | -- | 2.23 | -1.59 | -- | -- | -0.384 | 1.22 | 23.16 | 2204 | -- | -- |
| 559.83 | 1.11 | 5.71 | -0.427 | -- | -- | -- | -- | -0.221 | -- | -- | -- | -- | -- |
| 317.79 | 0.834 | 5.73 | -- | 2 | -- | -- | -- | -0.206 | 1.28 | -- | -- | -- | -- |
| 478.28 | 1.02 | 5.8 | -- | -- | -2.17 | -- | -- | -0.589 | -- | 26.96 | 948 | -- | -- |
| 564.63 | 1.11 | 5.7 | -- | -- | -- | -- | -- | -0.174 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 250.09 | wind | 3 | 14400 | < th | dose dependent | rect. | 22 | 4 |
| 4 | 252.10 | wind | 3 | 14400 | < th | dose dependent | rect. | 1 | 1 |
| 6 | 252.45 | temperature | 20 | 1440 | < th | dose independent | rect. | 5 | 1 |
| 7 | 252.54 | temperature | 20 | 1440 | > th | dose independent | rect. | 3 | 16 |
| 9 | 252.62 | temperature | 20 | 1440 | > th | dose independent | rect. | 3 | 14 |
| 10 | 252.65 | wind | 9 | 14400 | < th | dose dependent | rect. | 1 | 1 |
| 11 | 252.68 | temperature | 20 | 1440 | < th | dose independent | rect. | 3 | 14 |
| 12 | 252.68 | temperature | 20 | 1440 | < th | dose independent | rect. | 3 | 16 |
| 21 | 253.22 | temperature | 20 | 1440 | > th | dose independent | rect. | 5 | 2 |
| 37 | 253.96 | temperature | 20 | 1440 | > th | dose independent | rect. | 3 | 9 |
| 38 | 253.97 | temperature | 20 | 4320 | < th | dose dependent | rect. | 12 | 17 |
| 56 | 254.27 | wind | 1 | 14400 | < th | dose dependent | rect. | 6 | 2 |
| 66 | 254.35 | wind | 9 | 14400 | < th | dose dependent | rect. | 22 | 4 |
| 67 | 254.38 | temperature | 20 | 4320 | > th | dose independent | rect. | 22 | 1 |
| 97 | 254.77 | wind | 1 | 14400 | > th | dose dependent | rect. | 1 | 1 |
| 103 | 254.84 | temperature | 20 | 4320 | < th | dose dependent | rect. | 1 | 18 |
| 107 | 254.87 | temperature | 20 | 4320 | < th | dose dependent | rect. | 3 | 1 |
| 111 | 254.90 | temperature | 20 | 4320 | < th | dose dependent | sin | 14 | NA |
| 116 | 254.93 | temperature | 20 | 4320 | < th | dose dependent | rect. | 23 | 20 |
| 120 | 254.98 | wind | 1 | 14400 | < th | dose independent | rect. | 6 | 2 |
| 142 | 255.08 | temperature | 20 | 4320 | < th | dose dependent | rect. | 1 | 23 |
| 143 | 255.09 | wind | 1 | 43200 | < th | dose dependent | rect. | 12 | 1 |
| 180 | 255.24 | temperature | 20 | 4320 | < th | dose dependent | rect. | 1 | 3 |
| 187 | 255.27 | temperature | 20 | 4320 | < th | dose dependent | no | NA | NA |
| 222 | 255.38 | wind | 1 | 14400 | < th | dose dependent | rect. | 6 | 6 |
| 264 | 255.54 | temperature | 20 | 1440 | > th | dose independent | sin | 2 | NA |
| 292 | 255.64 | temperature | 20 | 4320 | < th | dose dependent | rect. | 1 | 6 |
| 316 | 255.72 | temperature | 20 | 1440 | < th | dose independent | sin | 2 | NA |
| 376 | 256.01 | temperature | 20 | 4320 | < th | dose independent | rect. | 22 | 1 |
| 380 | 256.02 | wind | 1 | 43200 | < th | dose independent | rect. | 12 | 1 |
| 427 | 256.33 | wind | 1 | 14400 | > th | dose independent | rect. | 6 | 2 |
| 438 | 256.39 | wind | 3 | 14400 | < th | dose dependent | rect. | 20 | 12 |
| 513 | 256.86 | wind | 1 | 14400 | > th | dose dependent | rect. | 22 | 4 |
| 535 | 257.00 | wind | 3 | 14400 | < th | dose dependent | rect. | 21 | 18 |
| 584 | 257.27 | temperature | 25 | 1440 | < th | dose dependent | rect. | 22 | 1 |
| 633 | 257.48 | wind | 3 | 43200 | < th | dose independent | rect. | 1 | 1 |
| 659 | 257.60 | temperature | 20 | 1440 | > th | dose independent | rect. | 22 | 21 |
| 667 | 257.62 | wind | 3 | 43200 | > th | dose independent | rect. | 1 | 1 |
| 700 | 257.79 | temperature | 20 | 1440 | < th | dose independent | rect. | 22 | 21 |
| 778 | 258.10 | wind | 1 | 14400 | > th | dose dependent | rect. | 5 | 2 |
| 783 | 258.11 | temperature | 25 | 720 | < th | dose dependent | rect. | 6 | 18 |
| 790 | 258.15 | wind | 1 | 14400 | > th | dose independent | rect. | 20 | 17 |
| 807 | 258.22 | wind | 1 | 14400 | > th | dose independent | rect. | 4 | 11 |
| 835 | 258.33 | wind | 1 | 43200 | > th | dose independent | rect. | 12 | 1 |
| 853 | 258.41 | temperature | 20 | 4320 | < th | dose independent | rect. | 9 | 19 |
| 892 | 258.54 | wind | 3 | 14400 | < th | dose dependent | sin | 7 | NA |
| 936 | 258.73 | temperature | 20 | 4320 | > th | dose independent | rect. | 10 | 18 |
| 942 | 258.79 | wind | 1 | 14400 | < th | dose independent | rect. | 6 | 6 |
| 969 | 258.86 | wind | 1 | 14400 | < th | dose independent | rect. | 20 | 17 |