Os07g0585800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to NADH-ubiquinone oxidoreductase 18 kDa subunit (EC 1.6.5.3) (EC 1.6.99.3) (Complex I-18KD) (CI-18KD) (Fragment).
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Os07g0585800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to NADH-ubiquinone oxidoreductase 18 kDa subunit (EC 1.6.5.3) (EC 1.6.99.3) (Complex I-18KD) (CI-18KD) (Fragment).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 12.08 | 0.163 | 11.9 | -0.111 | 0.145 | -0.284 | 0.347 | -0.235 | -0.177 | 13.7 | 75 | 1361 | -- | -- |
| 12.19 | 0.163 | 11.9 | -0.142 | 0.152 | -0.292 | 0.317 | -- | -0.187 | 13.6 | 75 | 1333 | -- | -- |
| 12.55 | 0.165 | 11.9 | -0.102 | 0.143 | -0.278 | -- | -0.207 | -0.176 | 13.6 | 74.95 | 1361 | -- | -- |
| 12.61 | 0.165 | 11.9 | -0.135 | 0.154 | -0.289 | -- | -- | -0.183 | 13.6 | 75 | 1327 | -- | -- |
| 12.95 | 0.168 | 11.9 | -0.0947 | -- | -0.349 | -- | -0.336 | -0.168 | -- | 75.92 | 1627 | -- | -- |
| 14.92 | 0.181 | 11.9 | -0.1 | 0.117 | -- | 0.277 | -- | -0.147 | 13.6 | -- | -- | -- | -- |
| 15.23 | 0.183 | 11.9 | -0.0912 | 0.117 | -- | -- | -- | -0.145 | 13.4 | -- | -- | -- | -- |
| 13.11 | 0.169 | 11.9 | -0.13 | -- | -0.361 | -- | -- | -0.179 | -- | 76 | 1625 | -- | -- |
| 13.09 | 0.169 | 11.9 | -- | 0.146 | -0.271 | -- | -- | -0.171 | 13.6 | 74.61 | 1333 | -- | -- |
| 16.06 | 0.187 | 11.9 | -0.0959 | -- | -- | -- | -- | -0.148 | -- | -- | -- | -- | -- |
| 15.45 | 0.184 | 11.9 | -- | 0.118 | -- | -- | -- | -0.135 | 13.4 | -- | -- | -- | -- |
| 13.57 | 0.172 | 11.9 | -- | -- | -0.344 | -- | -- | -0.161 | -- | 75.93 | 1652 | -- | -- |
| 16.31 | 0.188 | 11.9 | -- | -- | -- | -- | -- | -0.137 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 11.95 | humidity | 70 | 1440 | > th | dose dependent | rect. | 11 | 2 |
| 2 | 11.97 | humidity | 80 | 1440 | > th | dose independent | rect. | 1 | 15 |
| 5 | 11.98 | humidity | 70 | 1440 | > th | dose dependent | rect. | 8 | 7 |
| 7 | 12.00 | humidity | 70 | 1440 | > th | dose dependent | rect. | 5 | 11 |
| 14 | 12.01 | humidity | 60 | 1440 | > th | dose dependent | rect. | 1 | 15 |
| 17 | 12.02 | humidity | 70 | 1440 | > th | dose dependent | rect. | 10 | 4 |
| 33 | 12.05 | humidity | 80 | 1440 | < th | dose independent | rect. | 1 | 15 |
| 41 | 12.06 | humidity | 70 | 1440 | > th | dose independent | rect. | 9 | 6 |
| 94 | 12.10 | humidity | 80 | 1440 | > th | dose independent | sin | 3 | NA |
| 103 | 12.10 | humidity | 70 | 1440 | > th | dose dependent | sin | 2 | NA |
| 124 | 12.13 | humidity | 70 | 4320 | > th | dose independent | rect. | 11 | 1 |
| 172 | 12.17 | humidity | 80 | 1440 | < th | dose independent | sin | 3 | NA |
| 173 | 12.17 | radiation | 10 | 4320 | < th | dose independent | rect. | 8 | 3 |
| 196 | 12.18 | humidity | 90 | 1440 | < th | dose dependent | rect. | 23 | 16 |
| 249 | 12.22 | humidity | 70 | 1440 | < th | dose independent | rect. | 9 | 6 |
| 276 | 12.24 | humidity | 70 | 4320 | < th | dose independent | rect. | 11 | 1 |
| 325 | 12.27 | humidity | 90 | 1440 | < th | dose dependent | sin | 5 | NA |
| 335 | 12.28 | radiation | 10 | 4320 | < th | dose independent | rect. | 9 | 1 |
| 540 | 12.37 | humidity | 70 | 720 | > th | dose dependent | rect. | 7 | 21 |
| 578 | 12.40 | radiation | 10 | 4320 | > th | dose independent | rect. | 9 | 1 |
| 643 | 12.42 | radiation | 10 | 4320 | > th | dose independent | rect. | 8 | 3 |
| 759 | 12.47 | humidity | 80 | 720 | > th | dose independent | rect. | 7 | 21 |
| 765 | 12.47 | radiation | 10 | 4320 | < th | dose dependent | rect. | 7 | 5 |
| 794 | 12.48 | radiation | 10 | 4320 | < th | dose dependent | rect. | 7 | 3 |
| 848 | 12.50 | radiation | 20 | 4320 | < th | dose dependent | rect. | 9 | 1 |
| 930 | 12.52 | humidity | 60 | 1440 | > th | dose dependent | no | NA | NA |
| 977 | 12.53 | humidity | 60 | 1440 | > th | dose dependent | rect. | 4 | 23 |
| 990 | 12.54 | humidity | 80 | 720 | < th | dose independent | rect. | 12 | 22 |