Os07g0579000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os07g0579000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 117.48 | 0.509 | 6.74 | 0.349 | 0.837 | 1.51 | -0.446 | -2.16 | 0.29 | 4.91 | 21.3 | 2264 | -- | -- |
| 127.72 | 0.526 | 6.67 | 0.899 | 0.841 | 1.7 | -0.367 | -- | 0.401 | 4.73 | 21.3 | 2263 | -- | -- |
| 117.86 | 0.506 | 6.75 | 0.326 | 0.827 | 1.5 | -- | -2.21 | 0.276 | 4.85 | 21.43 | 2308 | -- | -- |
| 128.1 | 0.527 | 6.67 | 0.902 | 0.842 | 1.69 | -- | -- | 0.418 | 4.88 | 21.34 | 2269 | -- | -- |
| 151.3 | 0.573 | 6.76 | 0.301 | -- | 1.59 | -- | -2.15 | 0.27 | -- | 21.31 | 2584 | -- | -- |
| 204.34 | 0.67 | 6.56 | 1.7 | 0.876 | -- | -0.619 | -- | 0.913 | 4.37 | -- | -- | -- | -- |
| 205.38 | 0.671 | 6.56 | 1.71 | 0.871 | -- | -- | -- | 0.916 | 4.31 | -- | -- | -- | -- |
| 158.96 | 0.587 | 6.66 | 0.701 | -- | 2.12 | -- | -- | 0.474 | -- | 19.4 | 2506 | -- | -- |
| 127.07 | 0.525 | 6.69 | -- | 0.834 | 2.53 | -- | -- | 0.289 | 4.52 | 19.1 | 8022 | -- | -- |
| 246.28 | 0.733 | 6.56 | 1.74 | -- | -- | -- | -- | 0.939 | -- | -- | -- | -- | -- |
| 282.44 | 0.786 | 6.6 | -- | 0.904 | -- | -- | -- | 0.725 | 4.27 | -- | -- | -- | -- |
| 162.76 | 0.594 | 6.71 | -- | -- | 2.47 | -- | -- | 0.295 | -- | 19.08 | 9737 | -- | -- |
| 326.57 | 0.843 | 6.61 | -- | -- | -- | -- | -- | 0.745 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 116.98 | temperature | 25 | 1440 | < th | dose dependent | rect. | 3 | 7 |
| 10 | 117.62 | temperature | 25 | 1440 | < th | dose dependent | rect. | 22 | 13 |
| 21 | 118.01 | wind | 3 | 43200 | < th | dose independent | rect. | 21 | 2 |
| 26 | 118.20 | temperature | 30 | 1440 | < th | dose dependent | rect. | 4 | 2 |
| 30 | 118.33 | wind | 3 | 43200 | < th | dose independent | rect. | 20 | 4 |
| 32 | 118.34 | wind | 3 | 43200 | > th | dose independent | rect. | 20 | 3 |
| 37 | 118.40 | wind | 1 | 43200 | > th | dose dependent | rect. | 21 | 3 |
| 39 | 118.43 | temperature | 25 | 1440 | < th | dose dependent | sin | 8 | NA |
| 48 | 118.54 | temperature | 10 | 1440 | > th | dose dependent | rect. | 4 | 2 |
| 65 | 118.83 | wind | 9 | 43200 | < th | dose dependent | rect. | 21 | 3 |
| 99 | 119.30 | temperature | 30 | 1440 | < th | dose dependent | rect. | 23 | 7 |
| 107 | 119.40 | temperature | 10 | 1440 | > th | dose dependent | rect. | 23 | 7 |
| 111 | 119.44 | temperature | 10 | 1440 | > th | dose dependent | rect. | 1 | 5 |
| 133 | 119.68 | wind | 3 | 43200 | < th | dose dependent | rect. | 23 | 1 |
| 223 | 120.31 | temperature | 30 | 4320 | < th | dose dependent | rect. | 23 | 1 |
| 264 | 120.47 | temperature | 10 | 4320 | > th | dose dependent | rect. | 23 | 1 |
| 415 | 120.86 | temperature | 20 | 4320 | < th | dose independent | rect. | 19 | 4 |
| 632 | 121.46 | temperature | 10 | 4320 | > th | dose dependent | sin | 8 | NA |
| 762 | 121.75 | temperature | 20 | 4320 | < th | dose independent | rect. | 20 | 2 |
| 768 | 121.77 | temperature | 20 | 4320 | > th | dose independent | rect. | 19 | 4 |
| 887 | 122.00 | temperature | 20 | 4320 | > th | dose independent | rect. | 18 | 7 |
| 924 | 122.08 | temperature | 25 | 4320 | < th | dose dependent | no | NA | NA |
| 955 | 122.14 | temperature | 25 | 4320 | < th | dose dependent | rect. | 8 | 23 |
| 995 | 122.24 | temperature | 25 | 4320 | < th | dose dependent | rect. | 1 | 23 |