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Os07g0571900

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Prp18 domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 10.7 (0.0148) R2 : 0.0361
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.128 (0.0311) R2dN8 : 0.0466 R2N8 : 0.0361
σ : 0.278
deviance : 35.45
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
25.91 0.239 10.6 -0.0615 0.472 0.401 -1.15 -1.24 -0.11 10 0.2503 95 -- --
28.36 0.248 10.6 -0.124 0.52 0.447 0.188 -- -0.12 10.4 0.23 81 -- --
27.53 0.244 10.7 -0.0807 0.471 0.405 -- -0.437 -0.116 9.9 0.25 99 -- --
28.46 0.248 10.7 -0.137 0.495 0.415 -- -- -0.131 10.2 0.2178 81 -- --
27.89 0.246 10.7 -0.115 -- 0.391 -- -1.12 -0.106 -- 20.97 639 -- --
29.58 0.255 10.7 -0.166 0.283 -- -0.673 -- -0.156 4.97 -- -- -- --
30.68 0.259 10.7 -0.164 0.282 -- -- -- -0.152 5.38 -- -- -- --
29.69 0.254 10.7 -0.155 -- 0.375 -- -- -0.125 -- 12.33 662 -- --
28.85 0.25 10.7 -- 0.491 0.422 -- -- -0.123 10.2 0.07002 77 -- --
34.82 0.276 10.7 -0.154 -- -- -- -- -0.145 -- -- -- -- --
31.39 0.262 10.7 -- 0.279 -- -- -- -0.134 5.4 -- -- -- --
30.29 0.256 10.7 -- -- 0.376 -- -- -0.107 -- 14.9 659 -- --
35.45 0.278 10.7 -- -- -- -- -- -0.128 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 24.94 temperature 25 720 > th dose independent rect. 24 1
3 25.39 radiation 1 30 < th dose dependent rect. 19 21
7 25.46 radiation 1 10 < th dose independent rect. 19 22
11 25.51 temperature 25 270 > th dose independent rect. 24 5
19 25.65 temperature 25 1440 > th dose dependent rect. 24 1
24 25.74 humidity 80 720 < th dose independent rect. 19 20
28 25.80 humidity 80 720 > th dose independent rect. 24 22
35 25.89 radiation 1 30 < th dose dependent rect. 19 19
40 25.97 temperature 25 1440 < th dose independent rect. 24 2
44 25.98 humidity 70 720 > th dose independent rect. 16 13
45 25.98 atmosphere 1000 30 > th dose independent rect. 5 14
46 25.98 radiation 1 10 < th dose independent rect. 19 19
55 26.00 humidity 80 720 > th dose independent rect. 8 21
57 26.01 humidity 80 720 < th dose dependent rect. 18 5
59 26.03 temperature 20 10 > th dose independent rect. 24 5
66 26.05 humidity 80 720 > th dose independent rect. 7 15
69 26.06 humidity 70 720 > th dose independent rect. 16 5
80 26.08 humidity 50 720 > th dose dependent rect. 17 4
81 26.08 humidity 70 10 > th dose dependent rect. 11 18
83 26.08 radiation 1 90 < th dose dependent rect. 17 23
86 26.09 temperature 10 30 > th dose dependent rect. 19 10
88 26.10 humidity 70 720 > th dose independent rect. 17 10
97 26.12 humidity 80 720 < th dose dependent rect. 18 13
98 26.12 radiation 1 30 < th dose dependent rect. 19 17
103 26.13 humidity 80 720 > th dose independent rect. 18 21
120 26.18 temperature 25 270 < th dose independent rect. 22 9
125 26.18 radiation 1 30 < th dose dependent rect. 19 13
132 26.20 humidity 80 720 > th dose independent rect. 19 1
134 26.20 temperature 25 270 > th dose dependent rect. 24 5
139 26.21 radiation 1 90 < th dose dependent no NA NA
140 26.21 radiation 1 90 < th dose dependent rect. 9 23
151 26.24 radiation 1 10 < th dose independent rect. 19 17
155 26.24 humidity 80 720 < th dose dependent sin 12 NA
168 26.25 radiation 1 90 < th dose dependent rect. 12 23
178 26.28 humidity 80 720 < th dose independent rect. 7 15
180 26.28 radiation 1 30 < th dose dependent rect. 19 11
198 26.30 radiation 1 90 < th dose dependent rect. 15 23
199 26.31 humidity 80 1440 < th dose independent rect. 7 7
210 26.32 humidity 80 720 > th dose independent rect. 8 7
211 26.32 temperature 20 30 > th dose independent rect. 19 10
212 26.32 humidity 80 720 > th dose independent rect. 24 15
216 26.33 humidity 80 720 < th dose independent rect. 19 2
221 26.34 radiation 1 10 < th dose independent rect. 19 13
261 26.36 temperature 20 10 > th dose dependent rect. 24 5
277 26.37 humidity 80 720 < th dose independent rect. 11 23
320 26.40 temperature 10 30 > th dose dependent rect. 5 14
321 26.41 humidity 80 720 > th dose independent no NA NA
324 26.41 radiation 1 10 < th dose independent rect. 19 11
363 26.44 humidity 70 720 > th dose independent sin 15 NA
365 26.44 humidity 80 720 < th dose independent rect. 12 10
372 26.44 humidity 80 720 > th dose independent rect. 4 23
378 26.45 humidity 80 720 < th dose independent no NA NA
388 26.45 humidity 80 1440 > th dose dependent rect. 11 2
400 26.47 humidity 70 720 < th dose independent sin 13 NA
414 26.47 radiation 1 90 < th dose dependent rect. 23 23
432 26.49 humidity 80 720 > th dose independent rect. 10 23
466 26.52 humidity 80 10 > th dose independent rect. 11 18
473 26.52 radiation 1 720 < th dose dependent rect. 24 16
482 26.54 humidity 80 720 > th dose independent sin 0 NA
499 26.55 temperature 20 10 > th dose independent rect. 2 3
512 26.56 wind 7 1440 < th dose independent rect. 5 1
514 26.56 temperature 10 1440 > th dose independent rect. 5 1
517 26.56 temperature 30 1440 < th dose independent rect. 5 1
521 26.56 humidity 50 1440 > th dose independent rect. 5 1
530 26.56 atmosphere 995 1440 > th dose independent rect. 5 1
531 26.56 atmosphere 1015 1440 < th dose independent rect. 5 1
532 26.56 radiation 20 1440 < th dose independent rect. 5 1
544 26.56 humidity 70 720 < th dose independent rect. 15 17
545 26.56 temperature 10 1440 > th dose independent rect. 6 23
548 26.56 humidity 80 720 < th dose independent rect. 14 23
577 26.58 humidity 70 720 < th dose independent rect. 15 5
623 26.59 radiation 1 90 < th dose independent rect. 7 22
638 26.60 radiation 1 90 < th dose independent rect. 9 20
644 26.60 radiation 1 30 < th dose dependent sin 10 NA
680 26.62 wind 1 30 > th dose independent rect. 5 23
687 26.63 humidity 80 720 < th dose independent sin 20 NA
746 26.65 radiation 10 720 < th dose dependent rect. 9 12
747 26.65 humidity 70 720 > th dose dependent rect. 8 13
768 26.66 humidity 80 10 > th dose independent rect. 8 21
795 26.68 radiation 1 10 < th dose independent sin 9 NA
813 26.68 humidity 80 720 < th dose dependent rect. 14 19
840 26.69 radiation 1 10 > th dose independent rect. 16 23
901 26.71 radiation 1 90 > th dose independent rect. 16 23
912 26.72 humidity 80 1440 < th dose independent sin 4 NA
927 26.72 radiation 1 90 < th dose independent rect. 17 23
934 26.72 humidity 60 720 > th dose dependent rect. 2 19
936 26.73 radiation 30 14400 < th dose independent rect. 17 8
952 26.73 humidity 80 720 < th dose dependent rect. 14 12
961 26.73 radiation 10 720 < th dose dependent rect. 9 18
964 26.73 radiation 10 720 < th dose dependent rect. 9 20
986 26.74 humidity 50 10 > th dose dependent rect. 19 10
987 26.74 humidity 80 720 < th dose dependent rect. 14 10