BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os07g0571900 Os07g0571900|AK101604
         (438 letters)

Database: tair10 
           27,416 sequences; 11,106,569 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G03140.1  | chr1:754471-756223 REVERSE LENGTH=421              409   e-114
AT1G54590.1  | chr1:20391560-20393457 REVERSE LENGTH=362          318   4e-87

>AT1G03140.1 | chr1:754471-756223 REVERSE LENGTH=421
          Length = 420

 Score =  409 bits (1050), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 208/327 (63%), Positives = 236/327 (72%), Gaps = 10/327 (3%)

Query: 115 DELDLPRHEVVRRLRILREPVTLFGEDDADRLARLKFVLKSGVIDDIDDLDMTEGQTNDF 174
           + L LPR EV+RRLR L++P+TLFGEDD  RL RLK+VLK G+ +   D DMTEGQTNDF
Sbjct: 100 ENLILPRQEVIRRLRFLKQPMTLFGEDDQSRLDRLKYVLKEGLFEV--DSDMTEGQTNDF 157

Query: 175 LRDMVELRKRQRAGRDTYVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 234
           LRD+ EL+KRQ++G                                              
Sbjct: 158 LRDIAELKKRQKSG-----MMGDRKRKSRDERGRDEGDRGETREDELSGGESSDVDADKD 212

Query: 235 XXXMKTKFEELCDEDKILVFFKKLLIEWNQELDEMPELEKRTAKGKSMVATFKQCARYLS 294
              +K  FE+LCDEDKILVF+KKLLIEW QELD M   E+RTAKGK MVATFKQCARYL 
Sbjct: 213 MKRLKANFEDLCDEDKILVFYKKLLIEWKQELDAMENTERRTAKGKQMVATFKQCARYLV 272

Query: 295 PLFEFCRKQVLPDDIRQALLVIVECCMKRDYLAAMDQYIKLAIGNAPWPIGVTMVGIHER 354
           PLF  CRK+ LP DIRQAL+V+V  C+KRDYLAAMD YIKLAIGNAPWPIGVTMVGIHER
Sbjct: 273 PLFNLCRKKGLPADIRQALMVMVNHCIKRDYLAAMDHYIKLAIGNAPWPIGVTMVGIHER 332

Query: 355 SAREKIYTNSVAHIMNDETTRKYLQSIKRLMTLCQRRYPALPSKSVEFNSLANGSDLQAL 414
           SAREKIYTNSVAHIMNDETTRKYLQS+KRLMT CQRRYP +PSK+VEFNSLANGSDLQ+L
Sbjct: 333 SAREKIYTNSVAHIMNDETTRKYLQSVKRLMTFCQRRYPTMPSKAVEFNSLANGSDLQSL 392

Query: 415 LSEEKDPGN---PPSEDRLRLMPASKE 438
           L+EE+  G      SE+RLRLMP+  E
Sbjct: 393 LAEERFFGGNREQVSEERLRLMPSQSE 419



>AT1G54590.1 | chr1:20391560-20393457 REVERSE LENGTH=362
          Length = 361

 Score =  318 bits (814), Expect = 4e-87,   Method: Compositional matrix adjust.
 Identities = 170/310 (54%), Positives = 204/310 (65%), Gaps = 51/310 (16%)

Query: 145 RLARLKFVLKSGVIDDIDDLDMTEGQTNDFLRDMVEL------------RKRQRAGRDTY 192
           RL RLK+VLK G+ +++D+ DMT+G+TNDFLRD+ EL            RKR+ +  D  
Sbjct: 86  RLDRLKYVLKEGLFEEVDN-DMTQGETNDFLRDITELKKRERSSGLMNDRKRKTSNDDEL 144

Query: 193 VXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMKTKFEELCDEDKIL 252
           +                                             +  FE+LCDEDKIL
Sbjct: 145 IGAEKEDLKLLE----------------------------------EANFEDLCDEDKIL 170

Query: 253 VFFKKLLIEWNQELDEMPELEKRTAKGKSMVATFKQCARYLSPLFEFCRKQVLPDDIRQA 312
           VF KKLL+EW QEL+ M   E+RTA GK M+ATF QCARYL+PLF  CR + LP DIRQ 
Sbjct: 171 VFCKKLLLEWKQELEAMENTERRTAIGKQMLATFNQCARYLTPLFHLCRNKCLPADIRQG 230

Query: 313 LLVIVECCMKRDYLAAMDQYIKLAIGNAPWPIGVTMVGIHERSAREKIYT-NSVAHIMND 371
           L+V+V C +KRDYL A  Q+IKLAIGNAPWPIGVTMVGIHERSAREKI T +SVAHIMN+
Sbjct: 231 LMVMVNCWIKRDYLDATAQFIKLAIGNAPWPIGVTMVGIHERSAREKISTSSSVAHIMNN 290

Query: 372 ETTRKYLQSIKRLMTLCQRRYPALPSKSVEFNSLANGSDLQALLSEEKDPGNP---PSED 428
           ETTRKYLQS+KRLMT CQRRY ALPSKS+EFNSLANGS+L +LL+EE+         SE+
Sbjct: 291 ETTRKYLQSVKRLMTFCQRRYSALPSKSIEFNSLANGSNLHSLLAEERFFAADRERVSEE 350

Query: 429 RLRLMPASKE 438
           RL LMP+  E
Sbjct: 351 RLWLMPSLNE 360



  Database: tair10
    Posted date:  Dec 8, 2010 11:30 AM
  Number of letters in database: 11,106,569
  Number of sequences in database:  27,416
  
Lambda     K      H
   0.320    0.136    0.388 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 7,090,190
Number of extensions: 261512
Number of successful extensions: 723
Number of sequences better than 1.0e-05: 2
Number of HSP's gapped: 719
Number of HSP's successfully gapped: 4
Length of query: 438
Length of database: 11,106,569
Length adjustment: 102
Effective length of query: 336
Effective length of database: 8,310,137
Effective search space: 2792206032
Effective search space used: 2792206032
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 113 (48.1 bits)