Os07g0571600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
FiT-DB / Search/ Help/ Sample detail
|
Os07g0571600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Conserved hypothetical protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 155.32 | 0.586 | 9.12 | -2.1 | 2.19 | 1.46 | 2.65 | 0.803 | -1.61 | 9.75 | 10.47 | 1435 | -- | -- |
| 156.66 | 0.583 | 9.11 | -2.16 | 2.17 | 1.44 | 2.6 | -- | -1.62 | 9.74 | 10.46 | 1435 | -- | -- |
| 181.58 | 0.628 | 9.13 | -1.99 | 2.15 | 1.44 | -- | 0.78 | -1.62 | 9.83 | 10.47 | 1445 | -- | -- |
| 182.22 | 0.629 | 9.13 | -2.11 | 2.16 | 1.44 | -- | -- | -1.64 | 9.88 | 10.36 | 1438 | -- | -- |
| 307.06 | 0.821 | 9.11 | -1.65 | -- | 1.32 | -- | 1.11 | -1.28 | -- | 2.37 | 1589 | -- | -- |
| 220.67 | 0.696 | 9.04 | -1.76 | 2.14 | -- | 2.49 | -- | -1.23 | 9.6 | -- | -- | -- | -- |
| 243.28 | 0.73 | 9.04 | -1.66 | 2.12 | -- | -- | -- | -1.22 | 9.78 | -- | -- | -- | -- |
| 315.14 | 0.83 | 9.11 | -1.65 | -- | 1.32 | -- | -- | -1.28 | -- | 2.37 | 1589 | -- | -- |
| 266.71 | 0.761 | 9.04 | -- | 2.44 | 1.08 | -- | -- | -1.23 | 10 | 19.99 | 2761 | -- | -- |
| 511.71 | 1.06 | 9.1 | -1.68 | -- | -- | -- | -- | -1.22 | -- | -- | -- | -- | -- |
| 316.05 | 0.832 | 9 | -- | 2.13 | -- | -- | -- | -1.03 | 9.84 | -- | -- | -- | -- |
| 383.94 | 0.916 | 9.06 | -- | -- | 1.36 | -- | -- | -1.04 | -- | 4.84 | 1605 | -- | -- |
| 586.39 | 1.13 | 9.05 | -- | -- | -- | -- | -- | -1.03 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 153.85 | radiation | 10 | 1440 | > th | dose independent | rect. | 15 | 23 |
| 3 | 154.69 | radiation | 10 | 1440 | > th | dose independent | sin | 4 | NA |
| 6 | 154.84 | radiation | 10 | 1440 | > th | dose independent | rect. | 13 | 23 |
| 13 | 155.38 | radiation | 10 | 1440 | > th | dose independent | rect. | 11 | 23 |
| 16 | 155.64 | radiation | 10 | 1440 | > th | dose independent | rect. | 6 | 11 |
| 29 | 155.67 | radiation | 10 | 1440 | > th | dose independent | no | NA | NA |
| 112 | 155.99 | radiation | 10 | 1440 | > th | dose independent | rect. | 6 | 8 |
| 162 | 157.11 | radiation | 10 | 1440 | > th | dose independent | rect. | 8 | 23 |
| 163 | 157.19 | radiation | 20 | 1440 | < th | dose dependent | rect. | 11 | 23 |
| 167 | 157.34 | radiation | 20 | 1440 | < th | dose dependent | rect. | 15 | 23 |
| 171 | 157.43 | radiation | 20 | 1440 | < th | dose dependent | rect. | 6 | 12 |
| 175 | 157.50 | radiation | 20 | 1440 | < th | dose dependent | rect. | 6 | 22 |
| 181 | 157.52 | radiation | 20 | 1440 | < th | dose dependent | rect. | 6 | 19 |
| 186 | 157.57 | radiation | 20 | 1440 | < th | dose dependent | rect. | 2 | 16 |
| 190 | 157.57 | radiation | 20 | 1440 | < th | dose dependent | rect. | 24 | 18 |
| 216 | 157.59 | radiation | 20 | 1440 | < th | dose dependent | rect. | 19 | 23 |
| 238 | 157.66 | radiation | 20 | 1440 | < th | dose dependent | no | NA | NA |
| 322 | 158.24 | radiation | 20 | 1440 | < th | dose dependent | sin | 1 | NA |
| 385 | 158.78 | humidity | 70 | 1440 | > th | dose independent | rect. | 18 | 21 |
| 741 | 160.04 | humidity | 70 | 1440 | > th | dose independent | rect. | 9 | 11 |
| 743 | 160.04 | humidity | 70 | 1440 | > th | dose independent | rect. | 9 | 14 |
| 744 | 160.04 | humidity | 70 | 1440 | > th | dose independent | rect. | 9 | 18 |
| 746 | 160.04 | radiation | 1 | 1440 | > th | dose dependent | rect. | 13 | 21 |
| 748 | 160.05 | humidity | 70 | 1440 | > th | dose independent | rect. | 9 | 16 |
| 793 | 160.24 | humidity | 60 | 1440 | > th | dose dependent | rect. | 11 | 3 |
| 951 | 160.63 | radiation | 10 | 1440 | > th | dose independent | sin | 12 | NA |