BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os07g0571600 Os07g0571600|Os07g0571600
         (263 letters)

Database: tair10 
           27,416 sequences; 11,106,569 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G63170.1  | chr3:23334675-23335993 FORWARD LENGTH=280          224   4e-59
AT2G26310.1  | chr2:11201770-11203919 FORWARD LENGTH=399          112   2e-25

>AT3G63170.1 | chr3:23334675-23335993 FORWARD LENGTH=280
          Length = 279

 Score =  224 bits (570), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 110/208 (52%), Positives = 148/208 (71%), Gaps = 9/208 (4%)

Query: 62  WASISLAD--------GAAFPAETSXXXXXXXXXXXXXXXXXXKSIDVYAFGVYADDHDL 113
           W SI+LAD        G +FPA                     K+IDVYAFGVYAD  D+
Sbjct: 68  WGSITLADESVVEPKTGFSFPASIGDSRRLLGVGLRKKSLLGLKNIDVYAFGVYADCDDV 127

Query: 114 RQL-REKYQKLPVSQLKENAELINDALERDIRMTVRLQIVYGRLSIRSVRSAFEKSVGSR 172
           ++L  +KY  LP S+++ N   ++D +E DI+MT+RLQIVYG+L+IRSVR+AF++SVG+R
Sbjct: 128 KKLVGDKYANLPASEIRGNKSFMDDLMEADIKMTIRLQIVYGKLNIRSVRNAFQESVGNR 187

Query: 173 LLKFGGSDTHELLQSFVSLFKDEYKLPKGSVIELSRESSHVLKISIEGEELGSIQSKLLC 232
           L KFGGSD  ELLQSF SLFKDEYK+P+ S I+L+++  HVL ++IEG  +GS++S LLC
Sbjct: 188 LKKFGGSDNDELLQSFTSLFKDEYKIPRNSTIDLTKDPGHVLSVAIEGNHVGSVKSHLLC 247

Query: 233 KSILDLYIGDDPFDKNAKESVQENMASI 260
           +SILDLYIG++PFDKNA+E   +N AS+
Sbjct: 248 RSILDLYIGEEPFDKNAREDFLDNAASL 275



>AT2G26310.1 | chr2:11201770-11203919 FORWARD LENGTH=399
          Length = 398

 Score =  112 bits (279), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 61/167 (36%), Positives = 90/167 (53%), Gaps = 1/167 (0%)

Query: 97  KSIDVYAFGVYADDHDLRQ-LREKYQKLPVSQLKENAELINDALERDIRMTVRLQIVYGR 155
           KS+ VYAFG Y     + Q L  KY  +P S+L +  +L  D L  DI M+VRL + Y  
Sbjct: 230 KSLKVYAFGFYVHPSSVCQKLGRKYASVPASKLDKCDDLYKDLLREDIVMSVRLVVNYNG 289

Query: 156 LSIRSVRSAFEKSVGSRLLKFGGSDTHELLQSFVSLFKDEYKLPKGSVIELSRESSHVLK 215
           L I +VR  FEKS+ +RL+K         L  F S F+ +  +P G++I+  R     L 
Sbjct: 290 LKINTVRDVFEKSLRARLVKANPKTDFNCLNDFGSFFRQDIPIPAGTIIDFRRTEDGQLI 349

Query: 216 ISIEGEELGSIQSKLLCKSILDLYIGDDPFDKNAKESVQENMASILK 262
             I G  +G+++SK LC++   +YIGD P  +  KE +   +  I+K
Sbjct: 350 TEIGGNLIGAVRSKDLCRAFFGMYIGDVPVSEQTKEEIGRKVVGIIK 396



  Database: tair10
    Posted date:  Dec 8, 2010 11:30 AM
  Number of letters in database: 11,106,569
  Number of sequences in database:  27,416
  
Lambda     K      H
   0.316    0.134    0.371 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 4,055,744
Number of extensions: 143120
Number of successful extensions: 463
Number of sequences better than 1.0e-05: 2
Number of HSP's gapped: 461
Number of HSP's successfully gapped: 2
Length of query: 263
Length of database: 11,106,569
Length adjustment: 97
Effective length of query: 166
Effective length of database: 8,447,217
Effective search space: 1402238022
Effective search space used: 1402238022
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 111 (47.4 bits)