Os07g0569500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os07g0569500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 132.68 | 0.541 | 5.64 | 1.73 | 2.21 | -1.68 | 0.873 | -0.224 | 0.346 | 17.3 | 30.71 | 133 | -- | -- |
| 132.68 | 0.536 | 5.64 | 1.69 | 2.21 | -1.67 | 0.922 | -- | 0.334 | 17.3 | 30.71 | 143 | -- | -- |
| 134.3 | 0.54 | 5.62 | 1.78 | 2.21 | -1.68 | -- | -0.543 | 0.377 | 17.3 | 30.95 | 146 | -- | -- |
| 134.8 | 0.541 | 5.64 | 1.68 | 2.2 | -1.73 | -- | -- | 0.343 | 17.3 | 31.22 | 144 | -- | -- |
| 314.14 | 0.825 | 5.65 | 1.34 | -- | -4.01 | -- | -1.02 | 0.0797 | -- | 62.21 | 225 | -- | -- |
| 168.09 | 0.608 | 5.58 | 2.09 | 2.69 | -- | 1.23 | -- | 0.639 | 16.9 | -- | -- | -- | -- |
| 171.99 | 0.614 | 5.57 | 2.1 | 2.7 | -- | -- | -- | 0.645 | 16.9 | -- | -- | -- | -- |
| 314.87 | 0.826 | 5.67 | 1.18 | -- | -4.03 | -- | -- | 0.0375 | -- | 50.3 | 231 | -- | -- |
| 203.55 | 0.664 | 5.69 | -- | 1.95 | -2.77 | -- | -- | 0.0923 | 17.5 | 53.54 | 137 | -- | -- |
| 555.66 | 1.1 | 5.55 | 2 | -- | -- | -- | -- | 0.575 | -- | -- | -- | -- | -- |
| 287.9 | 0.794 | 5.63 | -- | 2.66 | -- | -- | -- | 0.411 | 17 | -- | -- | -- | -- |
| 349.25 | 0.87 | 5.71 | -- | -- | -4.43 | -- | -- | -0.138 | -- | 54.78 | 231 | -- | -- |
| 660.95 | 1.2 | 5.6 | -- | -- | -- | -- | -- | 0.354 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 118.75 | temperature | 30 | 270 | < th | dose dependent | rect. | 2 | 19 |
| 3 | 119.52 | temperature | 30 | 90 | < th | dose dependent | rect. | 5 | 16 |
| 7 | 121.06 | temperature | 30 | 90 | < th | dose dependent | rect. | 5 | 18 |
| 14 | 121.87 | temperature | 10 | 270 | > th | dose dependent | rect. | 7 | 19 |
| 21 | 122.77 | temperature | 30 | 10 | < th | dose dependent | rect. | 5 | 17 |
| 45 | 124.82 | temperature | 20 | 10 | > th | dose dependent | rect. | 8 | 21 |
| 57 | 125.32 | temperature | 15 | 270 | > th | dose dependent | rect. | 18 | 22 |
| 81 | 126.18 | temperature | 20 | 10 | > th | dose dependent | rect. | 8 | 18 |
| 96 | 126.79 | temperature | 25 | 90 | < th | dose independent | rect. | 5 | 18 |
| 123 | 127.78 | temperature | 25 | 270 | < th | dose independent | rect. | 3 | 18 |
| 145 | 128.27 | temperature | 25 | 270 | < th | dose independent | rect. | 2 | 20 |
| 232 | 130.32 | temperature | 15 | 270 | > th | dose dependent | rect. | 7 | 9 |
| 233 | 130.33 | temperature | 30 | 10 | < th | dose dependent | sin | 22 | NA |
| 272 | 131.11 | temperature | 15 | 10 | > th | dose dependent | sin | 22 | NA |
| 292 | 131.34 | temperature | 25 | 4320 | < th | dose dependent | rect. | 20 | 2 |
| 309 | 131.51 | temperature | 25 | 4320 | < th | dose dependent | rect. | 17 | 6 |
| 332 | 131.76 | temperature | 20 | 30 | > th | dose dependent | rect. | 3 | 23 |
| 347 | 131.88 | temperature | 30 | 10 | < th | dose dependent | rect. | 2 | 22 |
| 349 | 131.89 | temperature | 30 | 90 | < th | dose dependent | rect. | 4 | 23 |
| 391 | 132.27 | temperature | 20 | 4320 | > th | dose independent | rect. | 12 | 13 |
| 482 | 132.81 | temperature | 25 | 4320 | < th | dose dependent | sin | 18 | NA |
| 491 | 132.90 | temperature | 20 | 4320 | < th | dose independent | rect. | 12 | 13 |
| 502 | 133.00 | temperature | 10 | 4320 | > th | dose dependent | rect. | 21 | 1 |
| 504 | 133.01 | temperature | 20 | 4320 | < th | dose independent | rect. | 15 | 10 |
| 535 | 133.13 | temperature | 30 | 90 | < th | dose dependent | rect. | 13 | 23 |
| 541 | 133.16 | temperature | 20 | 4320 | < th | dose independent | rect. | 18 | 5 |
| 553 | 133.20 | temperature | 30 | 90 | < th | dose dependent | rect. | 11 | 23 |
| 622 | 133.50 | temperature | 20 | 4320 | > th | dose independent | sin | 18 | NA |
| 667 | 133.69 | temperature | 30 | 90 | < th | dose dependent | no | NA | NA |
| 703 | 133.81 | temperature | 15 | 90 | > th | dose dependent | no | NA | NA |
| 774 | 134.03 | temperature | 20 | 4320 | < th | dose independent | sin | 18 | NA |
| 856 | 134.27 | temperature | 20 | 10 | > th | dose dependent | no | NA | NA |
| 863 | 134.29 | temperature | 25 | 90 | > th | dose independent | rect. | 8 | 17 |
| 882 | 134.35 | temperature | 30 | 90 | < th | dose dependent | rect. | 15 | 23 |