Os07g0569000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os07g0569000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 30.01 | 0.257 | 9.73 | 1.72 | 0.252 | 0.55 | -0.0206 | -0.285 | 0.427 | 19 | 29.21 | 1485 | -- | -- |
| 30.09 | 0.255 | 9.74 | 1.68 | 0.245 | 0.523 | -0.0288 | -- | 0.437 | 18.9 | 29.06 | 1496 | -- | -- |
| 30.01 | 0.255 | 9.73 | 1.71 | 0.253 | 0.55 | -- | -0.275 | 0.426 | 19 | 29.21 | 1489 | -- | -- |
| 30.04 | 0.255 | 9.74 | 1.64 | 0.256 | 0.529 | -- | -- | 0.406 | 18.9 | 29.24 | 1509 | -- | -- |
| 33.25 | 0.269 | 9.73 | 1.68 | -- | 0.526 | -- | -0.154 | 0.411 | -- | 29.2 | 1442 | -- | -- |
| 42.98 | 0.307 | 9.76 | 1.47 | 0.255 | -- | -0.0061 | -- | 0.352 | 18.6 | -- | -- | -- | -- |
| 42.98 | 0.307 | 9.76 | 1.47 | 0.255 | -- | -- | -- | 0.352 | 18.6 | -- | -- | -- | -- |
| 33.26 | 0.269 | 9.74 | 1.64 | -- | 0.504 | -- | -- | 0.403 | -- | 29.2 | 1442 | -- | -- |
| 97.5 | 0.46 | 9.79 | -- | 0.204 | 0.287 | -- | -- | 0.189 | 19.1 | 29.3 | 3344 | -- | -- |
| 46.36 | 0.318 | 9.75 | 1.46 | -- | -- | -- | -- | 0.346 | -- | -- | -- | -- | -- |
| 99.73 | 0.467 | 9.79 | -- | 0.237 | -- | -- | -- | 0.188 | 19 | -- | -- | -- | -- |
| 99.73 | 0.465 | 9.78 | -- | -- | 0.235 | -- | -- | 0.227 | -- | 29.49 | 7249 | -- | -- |
| 102.69 | 0.473 | 9.79 | -- | -- | -- | -- | -- | 0.184 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 28.63 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 17 | 2 |
| 2 | 28.69 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 15 | 3 |
| 7 | 29.10 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 17 | 1 |
| 8 | 29.10 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 17 | 1 |
| 9 | 29.12 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 17 | 1 |
| 17 | 29.50 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 15 | 1 |
| 19 | 29.56 | temperature | 30.0 | 14400 | > th | dose independent | rect. | 15 | 1 |
| 20 | 29.64 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 15 | 18 |
| 21 | 29.66 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 20 | 11 |
| 27 | 29.71 | temperature | 30.0 | 14400 | > th | dose independent | rect. | 15 | 18 |
| 32 | 29.77 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 15 | 4 |
| 36 | 29.77 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 15 | 9 |
| 56 | 29.83 | temperature | 25.0 | 14400 | > th | dose dependent | rect. | 18 | 1 |
| 58 | 29.84 | temperature | 30.0 | 14400 | > th | dose independent | rect. | 15 | 4 |
| 72 | 29.84 | temperature | 25.0 | 14400 | > th | dose dependent | rect. | 17 | 3 |
| 111 | 29.94 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 11 | 10 |
| 118 | 29.98 | temperature | 30.0 | 14400 | < th | dose independent | sin | 12 | NA |
| 125 | 30.00 | temperature | 30.0 | 14400 | > th | dose independent | sin | 12 | NA |
| 132 | 30.02 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 6 | 12 |
| 138 | 30.05 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 14 | 6 |
| 161 | 30.10 | temperature | 25.0 | 1440 | > th | dose dependent | sin | 19 | NA |
| 175 | 30.12 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 17 | 2 |
| 177 | 30.12 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 19 | 5 |
| 313 | 30.26 | temperature | 30.0 | 14400 | > th | dose dependent | rect. | 17 | 17 |
| 337 | 30.28 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 19 | 19 |
| 410 | 30.34 | wind | 9.0 | 43200 | < th | dose independent | rect. | 19 | 2 |
| 425 | 30.35 | atmosphere | 1000.0 | 43200 | < th | dose independent | rect. | 12 | 1 |
| 451 | 30.37 | radiation | 40.0 | 1440 | < th | dose dependent | rect. | 16 | 15 |
| 476 | 30.39 | temperature | 25.0 | 1440 | > th | dose dependent | no | NA | NA |
| 488 | 30.40 | atmosphere | 1000.0 | 43200 | > th | dose independent | rect. | 12 | 1 |
| 489 | 30.40 | wind | 9.0 | 43200 | > th | dose independent | rect. | 19 | 2 |
| 491 | 30.40 | wind | 9.0 | 43200 | > th | dose independent | rect. | 20 | 11 |
| 501 | 30.40 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 13 | 23 |
| 509 | 30.41 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 20 | 23 |
| 513 | 30.42 | wind | 9.0 | 43200 | > th | dose independent | rect. | 19 | 5 |
| 527 | 30.43 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 17 | 23 |
| 532 | 30.44 | temperature | 20.0 | 270 | > th | dose dependent | rect. | 1 | 21 |
| 560 | 30.47 | radiation | 1.0 | 1440 | > th | dose dependent | rect. | 16 | 15 |
| 566 | 30.48 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 17 | 3 |
| 607 | 30.49 | wind | 9.0 | 43200 | > th | dose independent | rect. | 19 | 9 |
| 698 | 30.57 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 17 | 4 |
| 700 | 30.57 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 17 | 4 |
| 718 | 30.59 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 17 | 4 |
| 732 | 30.61 | temperature | 30.0 | 14400 | > th | dose dependent | sin | 11 | NA |
| 755 | 30.64 | radiation | 10.0 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 766 | 30.64 | wind | 9.0 | 43200 | < th | dose independent | rect. | 20 | 12 |
| 769 | 30.64 | radiation | 40.0 | 1440 | < th | dose dependent | rect. | 17 | 12 |
| 808 | 30.68 | temperature | 30.0 | 14400 | > th | dose independent | no | NA | NA |
| 809 | 30.68 | temperature | 30.0 | 14400 | < th | dose independent | no | NA | NA |
| 811 | 30.68 | wind | 9.0 | 43200 | < th | dose independent | rect. | 19 | 5 |
| 813 | 30.68 | temperature | 30.0 | 14400 | > th | dose independent | rect. | 8 | 11 |
| 814 | 30.68 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 8 | 11 |