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Os07g0568200

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Homeodomain-related containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 10.2 (0.011) R2 : 0.479
β1 : -- (--) R2dD : -- R2D : --
β2 : 0.579 (0.0284) R2dC : 0.477 R2C : 0.469
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.0602 (0.0232) R2dN8 : 0.00998 R2N8 : 0.00259
σ : 0.208
deviance : 19.69
__
_____
C
peak time of C : 7.45
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
15.69 0.185 10.2 0.204 0.632 0.468 -0.0213 1.25 -0.0682 6.61 10 10 -- --
17 0.193 10.2 0.0343 0.623 0.492 -0.0891 -- -0.115 6.59 10 10 -- --
15.69 0.185 10.2 0.204 0.632 0.468 -- 1.25 -0.068 6.61 10.05 10 -- --
17 0.192 10.2 0.0318 0.627 0.488 -- -- -0.115 6.64 10.91 17 -- --
34.91 0.277 10.2 0.341 -- 0.0501 -- 1.39 0.0103 -- 21.1 5 -- --
19.25 0.206 10.2 0.127 0.578 -- 0.0592 -- -0.0458 7.49 -- -- -- --
19.26 0.206 10.2 0.128 0.578 -- -- -- -0.046 7.46 -- -- -- --
36.3 0.281 10.2 0.0943 -- 0.235 -- -- -0.0682 -- 13.77 2 -- --
17.02 0.192 10.2 -- 0.63 0.504 -- -- -0.121 6.61 10.46 17 -- --
37.1 0.285 10.2 0.137 -- -- -- -- -0.0368 -- -- -- -- --
19.69 0.208 10.2 -- 0.579 -- -- -- -0.0602 7.45 -- -- -- --
36.53 0.281 10.2 -- -- 0.265 -- -- -0.0821 -- 12.37 2 -- --
37.6 0.286 10.2 -- -- -- -- -- -0.052 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 14.72 temperature 10 720 > th dose dependent rect. 19 18
16 15.14 temperature 10 720 > th dose dependent sin 9 NA
23 15.21 temperature 10 720 > th dose dependent rect. 1 14
27 15.22 temperature 15 720 > th dose dependent sin 7 NA
40 15.30 temperature 10 720 > th dose dependent rect. 21 9
55 15.36 temperature 20 30 > th dose dependent rect. 19 23
56 15.37 temperature 15 90 > th dose dependent rect. 3 14
59 15.37 temperature 15 10 > th dose dependent rect. 3 21
60 15.37 temperature 15 90 > th dose dependent rect. 3 21
71 15.40 temperature 10 270 > th dose dependent rect. 1 22
83 15.43 atmosphere 1005 43200 < th dose dependent rect. 9 4
94 15.45 atmosphere 1005 43200 < th dose dependent rect. 10 1
112 15.48 atmosphere 995 43200 < th dose dependent rect. 13 12
114 15.48 atmosphere 995 43200 < th dose dependent rect. 12 14
116 15.49 atmosphere 995 43200 > th dose independent rect. 21 19
122 15.50 atmosphere 995 43200 < th dose independent rect. 21 19
126 15.50 atmosphere 995 43200 < th dose dependent rect. 14 10
129 15.50 temperature 15 10 > th dose dependent rect. 1 23
131 15.51 atmosphere 995 43200 < th dose independent rect. 9 21
155 15.53 atmosphere 995 43200 > th dose independent rect. 22 17
156 15.53 atmosphere 995 43200 < th dose independent rect. 10 18
164 15.53 atmosphere 995 43200 > th dose independent rect. 8 23
175 15.53 atmosphere 995 43200 < th dose dependent rect. 11 16
179 15.54 atmosphere 995 43200 > th dose independent rect. 9 21
215 15.55 atmosphere 995 43200 < th dose dependent rect. 11 21
224 15.56 temperature 15 720 > th dose dependent rect. 2 5
233 15.57 atmosphere 995 43200 < th dose independent rect. 11 16
235 15.57 atmosphere 995 43200 > th dose independent rect. 10 18
241 15.57 temperature 15 720 > th dose dependent rect. 3 3
249 15.58 atmosphere 995 43200 > th dose independent no NA NA
268 15.59 atmosphere 995 43200 < th dose dependent sin 17 NA
275 15.60 atmosphere 995 43200 > th dose independent sin 5 NA
276 15.60 atmosphere 995 43200 < th dose independent no NA NA
292 15.60 temperature 30 90 < th dose dependent rect. 5 23
302 15.62 atmosphere 995 43200 > th dose independent rect. 11 16
321 15.64 atmosphere 995 43200 < th dose independent sin 5 NA
339 15.65 wind 1 14400 < th dose independent rect. 20 3
340 15.65 atmosphere 995 43200 < th dose independent rect. 12 14
391 15.68 atmosphere 1000 43200 < th dose dependent rect. 23 15
392 15.68 atmosphere 1000 43200 < th dose dependent rect. 22 17
397 15.68 atmosphere 1000 43200 < th dose dependent rect. 7 21
407 15.69 temperature 10 10 > th dose dependent no NA NA
409 15.69 atmosphere 1000 43200 < th dose dependent sin 5 NA
413 15.69 atmosphere 1000 43200 < th dose dependent rect. 24 13
423 15.69 atmosphere 1000 43200 < th dose dependent rect. 8 19
436 15.70 atmosphere 995 43200 > th dose independent rect. 2 23
437 15.70 atmosphere 995 43200 > th dose independent rect. 4 23
467 15.71 atmosphere 995 43200 < th dose independent sin 17 NA
497 15.71 atmosphere 1000 43200 < th dose dependent rect. 1 22
515 15.72 atmosphere 1000 43200 < th dose dependent no NA NA
575 15.73 temperature 20 10 > th dose dependent rect. 7 23
577 15.74 atmosphere 1000 43200 > th dose independent rect. 18 2
578 15.74 atmosphere 1000 43200 < th dose independent rect. 18 2
580 15.74 atmosphere 995 43200 > th dose independent rect. 12 14
604 15.75 temperature 20 720 > th dose independent rect. 21 16
616 15.75 temperature 20 10 > th dose dependent rect. 11 23
618 15.75 temperature 30 10 < th dose dependent rect. 17 23
651 15.77 atmosphere 995 43200 < th dose independent rect. 1 23
658 15.77 atmosphere 995 43200 < th dose dependent sin 9 NA
682 15.78 atmosphere 995 43200 > th dose independent sin 17 NA
694 15.78 temperature 30 720 < th dose dependent rect. 15 13
711 15.79 wind 3 14400 < th dose dependent rect. 20 3
728 15.79 temperature 20 10 > th dose dependent rect. 21 23
729 15.79 temperature 30 90 < th dose dependent rect. 21 23
732 15.80 wind 1 14400 > th dose independent rect. 20 3
733 15.80 atmosphere 995 43200 > th dose independent rect. 1 10
763 15.81 atmosphere 995 43200 < th dose independent rect. 1 10
784 15.81 temperature 20 10 > th dose dependent rect. 15 23
785 15.81 temperature 30 10 < th dose dependent rect. 23 23
833 15.83 temperature 30 720 < th dose dependent rect. 11 17
840 15.83 temperature 20 10 > th dose dependent rect. 23 23
842 15.84 wind 1 43200 > th dose independent rect. 6 1
843 15.84 wind 1 43200 < th dose independent rect. 18 4
875 15.84 temperature 20 10 > th dose dependent rect. 13 23
877 15.85 atmosphere 995 43200 > th dose independent rect. 5 3
878 15.85 atmosphere 995 43200 > th dose independent rect. 4 5
880 15.85 atmosphere 995 43200 < th dose independent rect. 13 12
906 15.85 temperature 30 10 < th dose dependent rect. 9 23
907 15.85 temperature 30 10 < th dose dependent rect. 13 23
909 15.86 wind 1 43200 < th dose independent rect. 6 1
912 15.86 atmosphere 995 43200 > th dose independent rect. 3 7
916 15.86 temperature 25 720 < th dose independent rect. 15 13
932 15.86 temperature 30 720 < th dose dependent rect. 9 18
940 15.86 temperature 30 10 < th dose dependent rect. 17 21
943 15.86 temperature 20 10 > th dose dependent rect. 9 23
946 15.86 temperature 30 10 < th dose dependent rect. 21 23
950 15.87 temperature 30 720 < th dose dependent sin 14 NA
972 15.87 temperature 30 270 < th dose dependent rect. 12 22
979 15.87 temperature 30 10 < th dose dependent rect. 15 23
982 15.88 temperature 25 720 < th dose independent sin 13 NA
984 15.88 atmosphere 995 43200 < th dose independent rect. 3 6
992 15.88 temperature 30 10 < th dose dependent no NA NA
995 15.88 temperature 30 720 < th dose dependent rect. 19 8