Os07g0567300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Alpha 1,4-glycosyltransferase conserved region family protein.
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Os07g0567300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Alpha 1,4-glycosyltransferase conserved region family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 27.62 | 0.247 | 9.38 | 1.02 | 0.964 | -0.88 | -0.309 | 1.29 | 0.282 | 7.13 | 19.14 | 760 | -- | -- |
| 28.45 | 0.248 | 9.42 | 0.756 | 0.956 | -0.94 | -0.581 | -- | 0.207 | 7.18 | 16.6 | 726 | -- | -- |
| 27.75 | 0.245 | 9.38 | 1.03 | 0.987 | -0.888 | -- | 1.36 | 0.29 | 7.15 | 18.1 | 762 | -- | -- |
| 29.33 | 0.252 | 9.42 | 0.742 | 0.983 | -0.925 | -- | -- | 0.205 | 7.12 | 16.28 | 769 | -- | -- |
| 58.16 | 0.355 | 9.36 | 1.41 | -- | -1.64 | -- | 3.11 | 0.436 | -- | 22.44 | 563 | -- | -- |
| 41.68 | 0.303 | 9.45 | 0.5 | 1.19 | -- | -0.429 | -- | 0.0503 | 7.45 | -- | -- | -- | -- |
| 42.19 | 0.304 | 9.44 | 0.491 | 1.19 | -- | -- | -- | 0.0511 | 7.46 | -- | -- | -- | -- |
| 63.68 | 0.372 | 9.42 | 0.856 | -- | -1.44 | -- | -- | 0.318 | -- | 20.63 | 574 | -- | -- |
| 42 | 0.302 | 9.44 | -- | 1.03 | -0.552 | -- | -- | 0.082 | 7.29 | 19.71 | 708 | -- | -- |
| 117.34 | 0.506 | 9.47 | 0.509 | -- | -- | -- | -- | 0.07 | -- | -- | -- | -- | -- |
| 48.54 | 0.326 | 9.46 | -- | 1.19 | -- | -- | -- | -0.00354 | 7.43 | -- | -- | -- | -- |
| 79.72 | 0.416 | 9.46 | -- | -- | -1.23 | -- | -- | 0.111 | -- | 24.2 | 561 | -- | -- |
| 124.18 | 0.52 | 9.49 | -- | -- | -- | -- | -- | 0.0135 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 26.15 | temperature | 20 | 1440 | > th | dose dependent | rect. | 17 | 1 |
| 3 | 26.30 | temperature | 10 | 720 | > th | dose dependent | rect. | 22 | 20 |
| 4 | 26.35 | temperature | 20 | 1440 | > th | dose dependent | rect. | 16 | 4 |
| 17 | 26.59 | temperature | 30 | 1440 | < th | dose dependent | rect. | 17 | 1 |
| 30 | 26.73 | temperature | 25 | 1440 | < th | dose independent | rect. | 14 | 8 |
| 41 | 26.77 | temperature | 10 | 720 | > th | dose dependent | rect. | 14 | 20 |
| 43 | 26.78 | temperature | 25 | 1440 | > th | dose independent | rect. | 14 | 8 |
| 48 | 26.82 | temperature | 25 | 1440 | > th | dose independent | rect. | 15 | 6 |
| 118 | 27.11 | temperature | 10 | 720 | > th | dose dependent | rect. | 1 | 17 |
| 167 | 27.27 | temperature | 20 | 1440 | > th | dose dependent | sin | 16 | NA |
| 244 | 27.43 | temperature | 30 | 720 | < th | dose dependent | rect. | 1 | 20 |
| 245 | 27.44 | temperature | 30 | 720 | < th | dose dependent | rect. | 24 | 22 |
| 326 | 27.58 | temperature | 10 | 720 | > th | dose dependent | rect. | 6 | 22 |
| 433 | 27.79 | temperature | 20 | 720 | > th | dose dependent | no | NA | NA |
| 570 | 27.98 | temperature | 30 | 1440 | < th | dose dependent | sin | 17 | NA |
| 633 | 28.03 | temperature | 25 | 1440 | < th | dose independent | sin | 18 | NA |
| 694 | 28.08 | temperature | 25 | 1440 | > th | dose independent | sin | 19 | NA |
| 739 | 28.12 | temperature | 30 | 720 | < th | dose dependent | rect. | 14 | 22 |
| 829 | 28.23 | temperature | 25 | 1440 | < th | dose independent | rect. | 6 | 17 |
| 917 | 28.31 | temperature | 25 | 1440 | > th | dose independent | rect. | 6 | 17 |