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Os07g0564000

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 9.67 (0.013) R2 : 0.105
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.201 (0.0275) R2dN8 : 0.135 R2N8 : 0.105
σ : 0.246
deviance : 27.72
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
18.43 0.202 9.67 -0.293 0.121 0.315 0.144 -0.288 0.193 8.76 14.53 96 -- --
18.7 0.201 9.67 -0.29 0.107 0.309 0.304 -- 0.194 8.83 14.79 101 -- --
18.5 0.2 9.67 -0.295 0.122 0.313 -- -0.31 0.191 8.5 14.53 94 -- --
19.05 0.203 9.67 -0.279 0.116 0.311 -- -- 0.191 8.76 14.8 101 -- --
19.11 0.204 9.68 -0.282 -- 0.298 -- -0.263 0.186 -- 16.68 146 -- --
21.77 0.219 9.68 -0.32 0.24 -- -0.192 -- 0.16 2.5 -- -- -- --
21.9 0.219 9.68 -0.315 0.24 -- -- -- 0.161 2.64 -- -- -- --
19.38 0.205 9.68 -0.318 -- 0.323 -- -- 0.185 -- 19.17 195 -- --
21.17 0.214 9.66 -- 0.117 0.304 -- -- 0.214 8.7 14.8 101 -- --
25.27 0.235 9.68 -0.305 -- -- -- -- 0.167 -- -- -- -- --
24.51 0.232 9.67 -- 0.234 -- -- -- 0.196 2.63 -- -- -- --
21.63 0.217 9.67 -- -- 0.295 -- -- 0.224 -- 15.11 163 -- --
27.72 0.246 9.67 -- -- -- -- -- 0.201 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 17.33 radiation 10 90 < th dose independent rect. 5 17
7 17.83 radiation 20 90 < th dose dependent rect. 5 17
14 18.00 radiation 10 90 < th dose independent sin 22 NA
22 18.06 radiation 10 90 < th dose independent rect. 4 23
46 18.27 radiation 20 90 < th dose dependent rect. 5 8
52 18.29 radiation 20 90 < th dose dependent rect. 5 6
53 18.30 radiation 10 270 < th dose independent rect. 10 22
54 18.30 temperature 15 30 > th dose dependent rect. 17 15
67 18.38 radiation 10 270 < th dose independent rect. 13 19
72 18.41 radiation 20 90 < th dose dependent rect. 5 10
76 18.43 radiation 40 270 < th dose dependent rect. 3 16
81 18.45 radiation 10 270 < th dose independent rect. 1 22
88 18.46 humidity 90 14400 > th dose dependent rect. 20 9
91 18.47 radiation 10 90 < th dose independent rect. 5 10
92 18.47 atmosphere 1010 90 < th dose independent rect. 5 17
103 18.50 humidity 90 14400 > th dose dependent rect. 2 6
105 18.50 humidity 90 14400 > th dose dependent rect. 24 9
118 18.51 radiation 40 270 < th dose dependent rect. 10 22
127 18.52 radiation 20 90 < th dose dependent rect. 4 23
144 18.55 radiation 20 90 < th dose independent rect. 5 6
154 18.56 humidity 90 14400 > th dose dependent rect. 23 4
181 18.59 humidity 90 14400 > th dose dependent sin 9 NA
188 18.60 humidity 90 14400 > th dose dependent rect. 24 1
198 18.61 radiation 10 270 < th dose independent rect. 3 12
217 18.62 temperature 30 30 < th dose dependent rect. 10 19
236 18.65 radiation 10 270 < th dose independent rect. 3 8
266 18.67 radiation 20 90 < th dose independent rect. 17 18
270 18.67 radiation 40 270 < th dose dependent rect. 3 12
305 18.71 temperature 30 90 < th dose dependent rect. 21 8
311 18.72 temperature 15 270 > th dose independent rect. 17 14
313 18.72 atmosphere 1010 270 < th dose independent rect. 3 18
321 18.72 radiation 40 270 < th dose dependent rect. 2 19
324 18.73 radiation 40 270 < th dose independent rect. 11 10
327 18.73 radiation 20 90 < th dose dependent sin 22 NA
332 18.74 radiation 40 90 < th dose independent rect. 5 17
334 18.74 radiation 10 90 < th dose independent rect. 12 23
341 18.74 temperature 10 30 > th dose dependent rect. 5 18
351 18.75 radiation 20 90 < th dose independent rect. 17 22
355 18.75 radiation 20 270 < th dose dependent rect. 3 10
363 18.76 radiation 1 4320 < th dose dependent rect. 6 3
377 18.77 radiation 10 90 < th dose independent rect. 15 23
389 18.77 temperature 30 30 < th dose dependent rect. 8 21
391 18.78 wind 9 43200 < th dose independent rect. 18 1
396 18.78 radiation 1 4320 < th dose dependent rect. 7 1
416 18.80 radiation 10 90 < th dose independent no NA NA
420 18.80 humidity 70 30 > th dose independent rect. 5 18
443 18.82 radiation 20 30 < th dose independent rect. 5 3
444 18.82 temperature 15 30 > th dose independent rect. 17 15
465 18.83 radiation 10 90 > th dose independent rect. 10 23
481 18.84 wind 1 90 > th dose independent rect. 22 7
495 18.84 radiation 10 4320 < th dose dependent rect. 24 5
505 18.85 wind 9 43200 > th dose independent rect. 18 1
506 18.85 radiation 1 4320 < th dose independent rect. 6 3
521 18.86 radiation 30 4320 < th dose independent rect. 16 16
534 18.87 radiation 1 4320 > th dose independent rect. 6 3
546 18.87 wind 9 43200 > th dose dependent rect. 18 1
571 18.88 humidity 60 30 > th dose dependent rect. 5 5
578 18.89 humidity 80 10 > th dose independent rect. 5 5
586 18.89 temperature 20 30 > th dose independent rect. 5 18
616 18.91 radiation 10 90 > th dose independent rect. 7 10
653 18.93 radiation 1 4320 < th dose independent rect. 6 6
669 18.93 humidity 50 30 > th dose dependent rect. 5 18
674 18.93 radiation 30 270 < th dose dependent rect. 13 19
677 18.94 radiation 1 4320 > th dose independent rect. 6 6
694 18.95 radiation 10 90 > th dose independent sin 23 NA
724 18.96 wind 1 270 > th dose independent rect. 7 10
733 18.96 radiation 20 30 < th dose independent rect. 17 15
780 18.97 radiation 20 270 < th dose dependent sin 2 NA
813 18.98 radiation 20 270 < th dose dependent rect. 16 16
819 18.98 radiation 30 90 < th dose dependent rect. 12 23
836 18.99 radiation 1 270 > th dose dependent rect. 7 8
842 18.99 atmosphere 1015 30 < th dose dependent rect. 5 18
843 18.99 radiation 30 90 < th dose dependent rect. 17 18
963 19.03 radiation 1 4320 < th dose dependent rect. 6 6
970 19.04 humidity 50 10 > th dose independent rect. 5 18