Os07g0560300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Armadillo-like helical domain containing protein.
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Os07g0560300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Armadillo-like helical domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 224.57 | 0.704 | 7.72 | -2.74 | 0.898 | 1.87 | 0.114 | -6.05 | 0.14 | 16.9 | 21.32 | 1404 | -- | -- |
| 235.78 | 0.715 | 7.57 | -1.56 | 0.809 | 2.38 | 0.226 | -- | 0.348 | 16.9 | 9.457 | 7715 | -- | -- |
| 224.55 | 0.698 | 7.72 | -2.72 | 0.884 | 1.86 | -- | -5.97 | 0.143 | 17 | 21.42 | 1432 | -- | -- |
| 235.97 | 0.715 | 7.57 | -1.55 | 0.818 | 2.36 | -- | -- | 0.353 | 17 | 10.29 | 7715 | -- | -- |
| 233.05 | 0.711 | 7.56 | -1.64 | -- | 2.51 | -- | -4.5 | 0.455 | -- | 15.3 | 315 | -- | -- |
| 326.37 | 0.847 | 7.43 | -0.349 | 0.813 | -- | 0.225 | -- | 1 | 17.3 | -- | -- | -- | -- |
| 326.5 | 0.846 | 7.43 | -0.349 | 0.814 | -- | -- | -- | 1 | 17.3 | -- | -- | -- | -- |
| 248.83 | 0.735 | 7.5 | -0.944 | -- | 2.74 | -- | -- | 0.608 | -- | 10.63 | 336 | -- | -- |
| 271.16 | 0.771 | 7.48 | -- | 0.589 | 2.35 | -- | -- | 0.765 | 20.8 | 12.29 | 7482 | -- | -- |
| 361.1 | 0.888 | 7.42 | -0.377 | -- | -- | -- | -- | 0.984 | -- | -- | -- | -- | -- |
| 329.72 | 0.849 | 7.42 | -- | 0.82 | -- | -- | -- | 1.04 | 17.3 | -- | -- | -- | -- |
| 270.67 | 0.766 | 7.47 | -- | -- | 2.42 | -- | -- | 0.75 | -- | 10.16 | 330 | -- | -- |
| 364.86 | 0.892 | 7.41 | -- | -- | -- | -- | -- | 1.03 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 201.63 | wind | 5 | 43200 | > th | dose dependent | rect. | 15 | 1 |
| 2 | 203.25 | humidity | 80 | 43200 | > th | dose independent | rect. | 21 | 2 |
| 3 | 203.46 | wind | 5 | 43200 | > th | dose independent | rect. | 14 | 8 |
| 4 | 204.01 | wind | 5 | 43200 | < th | dose independent | rect. | 14 | 8 |
| 9 | 204.41 | humidity | 80 | 43200 | < th | dose independent | rect. | 21 | 1 |
| 13 | 205.07 | wind | 3 | 43200 | > th | dose independent | rect. | 20 | 1 |
| 15 | 205.51 | wind | 5 | 43200 | < th | dose dependent | rect. | 20 | 1 |
| 16 | 205.64 | humidity | 80 | 43200 | < th | dose independent | rect. | 20 | 3 |
| 19 | 205.93 | wind | 3 | 43200 | > th | dose dependent | rect. | 14 | 8 |
| 28 | 206.48 | wind | 7 | 43200 | < th | dose independent | rect. | 15 | 1 |
| 32 | 206.77 | wind | 7 | 43200 | > th | dose independent | rect. | 15 | 1 |
| 33 | 206.77 | wind | 1 | 43200 | > th | dose dependent | rect. | 19 | 2 |
| 38 | 206.84 | wind | 9 | 43200 | < th | dose dependent | rect. | 19 | 2 |
| 43 | 207.57 | wind | 3 | 43200 | < th | dose independent | rect. | 20 | 1 |
| 49 | 207.96 | wind | 5 | 43200 | > th | dose dependent | rect. | 15 | 4 |
| 111 | 210.40 | wind | 3 | 43200 | > th | dose dependent | sin | 18 | NA |
| 134 | 211.08 | wind | 5 | 43200 | < th | dose independent | sin | 18 | NA |
| 166 | 211.77 | wind | 5 | 43200 | > th | dose independent | sin | 18 | NA |
| 189 | 212.24 | wind | 9 | 43200 | < th | dose dependent | rect. | 11 | 11 |
| 208 | 212.54 | humidity | 80 | 43200 | < th | dose independent | rect. | 20 | 10 |
| 232 | 212.89 | wind | 9 | 43200 | < th | dose dependent | rect. | 13 | 10 |
| 304 | 214.01 | humidity | 80 | 43200 | > th | dose independent | rect. | 20 | 7 |
| 329 | 214.43 | wind | 9 | 43200 | < th | dose dependent | rect. | 16 | 6 |
| 351 | 214.67 | radiation | 40 | 43200 | > th | dose independent | rect. | 9 | 2 |
| 376 | 214.97 | wind | 9 | 43200 | < th | dose dependent | rect. | 9 | 8 |
| 386 | 215.04 | humidity | 80 | 43200 | < th | dose dependent | rect. | 20 | 3 |
| 407 | 215.28 | wind | 5 | 14400 | > th | dose dependent | rect. | 5 | 11 |
| 408 | 215.30 | radiation | 40 | 43200 | < th | dose independent | rect. | 9 | 1 |
| 409 | 215.30 | wind | 9 | 43200 | < th | dose dependent | rect. | 11 | 5 |
| 411 | 215.31 | humidity | 80 | 43200 | > th | dose independent | rect. | 20 | 12 |
| 413 | 215.33 | wind | 9 | 43200 | < th | dose dependent | sin | 20 | NA |
| 472 | 215.97 | humidity | 80 | 43200 | < th | dose dependent | rect. | 20 | 15 |
| 544 | 216.75 | wind | 1 | 43200 | < th | dose dependent | rect. | 24 | 2 |
| 619 | 217.40 | wind | 1 | 43200 | < th | dose dependent | rect. | 11 | 17 |
| 631 | 217.55 | radiation | 20 | 43200 | < th | dose independent | rect. | 8 | 2 |
| 665 | 217.83 | wind | 1 | 43200 | < th | dose dependent | rect. | 8 | 20 |
| 692 | 218.09 | radiation | 20 | 43200 | > th | dose dependent | rect. | 9 | 2 |
| 693 | 218.10 | humidity | 80 | 43200 | < th | dose dependent | rect. | 20 | 10 |
| 749 | 218.49 | radiation | 20 | 43200 | > th | dose independent | rect. | 8 | 2 |
| 782 | 218.78 | wind | 7 | 14400 | < th | dose independent | rect. | 5 | 11 |
| 854 | 219.31 | radiation | 1 | 14400 | < th | dose dependent | rect. | 2 | 3 |
| 858 | 219.38 | wind | 7 | 14400 | > th | dose independent | rect. | 5 | 11 |
| 864 | 219.41 | radiation | 1 | 14400 | < th | dose dependent | rect. | 4 | 1 |
| 865 | 219.42 | humidity | 80 | 43200 | < th | dose independent | rect. | 4 | 1 |
| 906 | 219.57 | radiation | 10 | 43200 | < th | dose dependent | rect. | 9 | 1 |
| 942 | 219.85 | wind | 1 | 43200 | < th | dose independent | rect. | 24 | 2 |
| 952 | 219.91 | temperature | 20 | 1440 | > th | dose dependent | rect. | 16 | 3 |
| 993 | 220.23 | humidity | 70 | 43200 | < th | dose dependent | rect. | 10 | 1 |