Os07g0543500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Armadillo-like helical domain containing protein.
FiT-DB / Search/ Help/ Sample detail
|
Os07g0543500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Armadillo-like helical domain containing protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 98.02 | 0.465 | 10 | 1.12 | 0.846 | -1.24 | -0.0322 | 0.414 | 0.342 | 4.47 | 22.15 | 334 | -- | -- |
| 98.16 | 0.461 | 10 | 1.14 | 0.843 | -1.32 | 0.0467 | -- | 0.342 | 4.44 | 22.06 | 329 | -- | -- |
| 98.02 | 0.461 | 10 | 1.12 | 0.846 | -1.23 | -- | 0.414 | 0.34 | 4.47 | 22.22 | 333 | -- | -- |
| 98.13 | 0.461 | 10 | 1.14 | 0.851 | -1.37 | -- | -- | 0.35 | 4.48 | 21.91 | 333 | -- | -- |
| 128.94 | 0.529 | 10 | 1.09 | -- | -1.26 | -- | 0.329 | 0.345 | -- | 21.56 | 1123 | -- | -- |
| 114.87 | 0.502 | 9.98 | 1.44 | 0.757 | -- | 0.0821 | -- | 0.501 | 4.45 | -- | -- | -- | -- |
| 114.89 | 0.502 | 9.98 | 1.44 | 0.757 | -- | -- | -- | 0.501 | 4.45 | -- | -- | -- | -- |
| 129.01 | 0.529 | 10 | 1.12 | -- | -1.35 | -- | -- | 0.355 | -- | 21.5 | 1144 | -- | -- |
| 118.76 | 0.508 | 10.1 | -- | 0.708 | -1.92 | -- | -- | 0.216 | 4.44 | 19.86 | 7693 | -- | -- |
| 145.59 | 0.564 | 9.99 | 1.47 | -- | -- | -- | -- | 0.521 | -- | -- | -- | -- | -- |
| 169.54 | 0.609 | 10 | -- | 0.784 | -- | -- | -- | 0.341 | 4.41 | -- | -- | -- | -- |
| 148.11 | 0.567 | 10.1 | -- | -- | -1.92 | -- | -- | 0.149 | -- | 20.28 | 8099 | -- | -- |
| 202.56 | 0.664 | 10 | -- | -- | -- | -- | -- | 0.358 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 99.05 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 9 | 1 |
| 2 | 99.54 | temperature | 25.0 | 270 | < th | dose dependent | rect. | 19 | 21 |
| 6 | 99.76 | temperature | 20.0 | 30 | > th | dose independent | rect. | 19 | 21 |
| 9 | 99.79 | temperature | 20.0 | 720 | > th | dose independent | rect. | 9 | 21 |
| 12 | 99.83 | temperature | 20.0 | 270 | > th | dose independent | rect. | 16 | 22 |
| 29 | 100.01 | temperature | 20.0 | 270 | < th | dose dependent | rect. | 3 | 23 |
| 45 | 100.12 | temperature | 20.0 | 270 | < th | dose dependent | no | NA | NA |
| 47 | 100.12 | temperature | 20.0 | 270 | < th | dose dependent | rect. | 11 | 23 |
| 48 | 100.12 | temperature | 20.0 | 270 | < th | dose dependent | rect. | 13 | 23 |
| 85 | 100.25 | temperature | 20.0 | 270 | < th | dose dependent | rect. | 8 | 23 |
| 87 | 100.26 | temperature | 20.0 | 270 | < th | dose dependent | rect. | 21 | 13 |
| 128 | 100.52 | temperature | 25.0 | 1440 | < th | dose dependent | rect. | 9 | 2 |
| 161 | 100.68 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 9 | 1 |
| 162 | 100.68 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 19 | 1 |
| 167 | 100.71 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 19 | 1 |
| 170 | 100.72 | temperature | 20.0 | 270 | < th | dose dependent | sin | 9 | NA |
| 192 | 100.77 | temperature | 20.0 | 10 | > th | dose independent | rect. | 19 | 23 |
| 213 | 100.86 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 19 | 1 |
| 214 | 100.86 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 19 | 1 |
| 259 | 100.98 | temperature | 20.0 | 720 | < th | dose independent | rect. | 8 | 21 |
| 332 | 101.15 | temperature | 20.0 | 270 | < th | dose independent | rect. | 19 | 21 |
| 353 | 101.18 | temperature | 20.0 | 720 | < th | dose independent | rect. | 4 | 22 |
| 354 | 101.18 | temperature | 20.0 | 90 | > th | dose independent | rect. | 9 | 23 |
| 359 | 101.19 | temperature | 20.0 | 720 | > th | dose independent | rect. | 23 | 22 |
| 442 | 101.35 | temperature | 20.0 | 720 | > th | dose independent | rect. | 1 | 23 |
| 467 | 101.39 | temperature | 20.0 | 1440 | < th | dose dependent | rect. | 3 | 11 |
| 470 | 101.40 | temperature | 20.0 | 720 | > th | dose independent | no | NA | NA |
| 488 | 101.42 | wind | 1.0 | 14400 | > th | dose independent | rect. | 5 | 1 |
| 501 | 101.43 | temperature | 20.0 | 720 | < th | dose independent | rect. | 1 | 23 |
| 529 | 101.47 | temperature | 20.0 | 720 | < th | dose independent | no | NA | NA |
| 548 | 101.51 | temperature | 20.0 | 720 | < th | dose independent | rect. | 11 | 23 |
| 579 | 101.56 | temperature | 20.0 | 720 | < th | dose independent | rect. | 14 | 23 |
| 636 | 101.66 | atmosphere | 1010.0 | 270 | < th | dose independent | rect. | 16 | 22 |
| 641 | 101.66 | atmosphere | 1005.0 | 10 | > th | dose dependent | rect. | 21 | 22 |
| 673 | 101.71 | temperature | 20.0 | 10 | > th | dose independent | rect. | 9 | 23 |
| 715 | 101.77 | temperature | 20.0 | 1440 | < th | dose dependent | sin | 4 | NA |
| 738 | 101.81 | wind | 1.0 | 14400 | < th | dose independent | rect. | 5 | 1 |
| 796 | 101.89 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 20 | 1 |
| 885 | 102.00 | temperature | 20.0 | 1440 | < th | dose dependent | rect. | 3 | 2 |
| 904 | 102.02 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 10 | 1 |
| 911 | 102.02 | wind | 5.0 | 43200 | < th | dose dependent | rect. | 5 | 1 |
| 952 | 102.07 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 18 | 4 |
| 978 | 102.11 | temperature | 20.0 | 720 | > th | dose independent | rect. | 16 | 14 |
| 986 | 102.11 | temperature | 20.0 | 720 | < th | dose dependent | sin | 14 | NA |
| 997 | 102.12 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 5 | 1 |