BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os07g0543500 Os07g0543500|Os07g0543500
(996 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G18980.1 | chr5:6334944-6337943 REVERSE LENGTH=836 170 4e-42
AT3G06210.1 | chr3:1880093-1883317 FORWARD LENGTH=841 164 3e-40
AT4G14280.1 | chr4:8222518-8225074 FORWARD LENGTH=799 120 3e-27
>AT5G18980.1 | chr5:6334944-6337943 REVERSE LENGTH=836
Length = 835
Score = 170 bits (430), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 167/668 (25%), Positives = 294/668 (44%), Gaps = 105/668 (15%)
Query: 340 LHKNNKEDEETNLVPSLIVFYAMVTAQGILYTV----------ACTLEIFSFIPRRSLIR 389
+HK + + + N +L +FY++ A+ +L+ V C L ++ R
Sbjct: 250 VHKGDTD--KRNRQSALNIFYSLAFAEALLFLVEKVYWEWQVSVCNL-------LENVTR 300
Query: 390 RAGFRGQLGVEYVNLYYAYALEKCMEKAVFAPKKTSLGNFAMDSLNSDSPKNHLYGIQLM 449
F G G+ + ++ + KC+ ++F K + +F M+ LNS+S L G++++
Sbjct: 301 ECEF-GVSGLVSIKRFFYDSYSKCVNGSIFDGLKMDIVSFGMELLNSNSSDEQLIGVRIL 359
Query: 450 HSLLEKETTRARLLEKLITSTKTMARIISMLGWTSPNYMMVRLYAAKVTAELAKDLQVIA 509
E LEK+ + + R++ ML W KDLQ
Sbjct: 360 RQFSVTERYSEDTLEKIGINFPVIERLVEMLNW--------------------KDLQEEE 399
Query: 510 VPR-AMQLVSALLDTDGKLKKGNPLLQVDDEQEERQDPILSTANSQEERPNAIRNADDPP 568
+ R A +++S L KK N L R I S R++ + P
Sbjct: 400 IRRSAAEILSKLAG-----KKQNSL---------RVAGISGAMESISSLLENTRSSGEAP 445
Query: 569 KQRQQETLQGTDNLPETQTRSAHIHEQNCIIRSLQKISEYWTVPKEHPLTYHDQLPALGM 628
D + E + H+ N ++W + LG+
Sbjct: 446 -----------DEIGEKKV----FHDHNLHY-------DFW------------RFNNLGL 471
Query: 629 LIVDKLASCDQNNCVEIDRVTDLIPKIIGFTS-----FRSDTMNSEAQQMVLVKSSLKVL 683
LI+ KLA D +NC ++ L+PKII FT R + + +++ +K SL+++
Sbjct: 472 LILKKLAK-DHDNCGKLGNTRGLLPKIIDFTHADENLLRDENADIARSRVLTLKRSLQLV 530
Query: 684 QRLTSIEGEIGKALRYKISKHPFLLRNLADILGDNIRDQELKKLAVGILRNISIDGNTRQ 743
+ L S G GK LR +IS+ F + N+ D+L R +L+KL +GIL N++++ R+
Sbjct: 531 KMLASTTGNTGKCLRREISEIVFTVSNVRDVLKHGARYPKLQKLGIGILTNLALEAEARE 590
Query: 744 EIGNMKVLITRLMKAFLDLHRTSNTDVDFLLPKVAGQALAMLAMDNVHNCLVMLKEPEFI 803
IG ++ L F + + + AG+A+AML +++ NCL +L+ +
Sbjct: 591 RIGGTGGVLKELFNIFFKRETRGDEGNEGCVRIAAGEAIAMLVLESKSNCLHVLR----L 646
Query: 804 TKLKNMILIQDEKYIYV-APSLLRSMCQHAQAKLTELDLKELSHTLREVLERIMNAEGAE 862
+ ++ + I V A +LR+MC ++ + DLK + VL+ I + +
Sbjct: 647 GVMGRLVEALEVPSIRVNAARVLRNMCLYSGDECFH-DLKFVKAAAPTVLKSITSEDNKL 705
Query: 863 LEILIGLSSQICKV--NPEEFAQELDHGHIRQRFVKRLVDALNANMKPSAHCPGIRRVIL 920
E+++GL++Q+ + + E + G RQ LV L N KP+ P IRR ++
Sbjct: 706 QEVMVGLAAQVFRFMSSKESSYVFMYSGIKRQELANSLVSILKKNDKPAIKVPRIRRFVI 765
Query: 921 EQSIYMMECNSHYANC--FNEFRMMDALSIVEETPSKVENYMVFLGDVGFMECGTPLFAL 978
E +I+MME + N F E + L V ET +++EN+ VF G VG + +L
Sbjct: 766 ELAIWMMEDDELEDNVALFREMGLEKELEKVLETTAELENFDVFSGTVGLSRHSRTVHSL 825
Query: 979 VDRAKELM 986
+ A E++
Sbjct: 826 AELALEIL 833
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/69 (46%), Positives = 44/69 (63%), Gaps = 4/69 (5%)
Query: 37 EKWLNGFVSLVALVERVGNALGTLAFTWATVVLLGGYPTSLTALGSYNDFWFATAIIFLE 96
EK L F +A++E+ +GTL F WATVVLLGG+ +L +DFWF T I+ +E
Sbjct: 71 EKKLTLFALQLAILEKTATGIGTLGFIWATVVLLGGFAITLDG----SDFWFITIILLIE 126
Query: 97 SARMFSGSN 105
AR+FS S+
Sbjct: 127 GARIFSRSH 135
>AT3G06210.1 | chr3:1880093-1883317 FORWARD LENGTH=841
Length = 840
Score = 164 bits (414), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 160/593 (26%), Positives = 264/593 (44%), Gaps = 89/593 (15%)
Query: 386 SLIRRAGFRGQLGVEYVNLYYAYALEKCMEKAVFAPKKTSLGNFAMDSLNSDSPKNHLYG 445
++ R GF G G+ + ++ A K + ++F K + +FAMD L S+ L G
Sbjct: 302 NVTRECGF-GVTGMVSIKRFFYDAYSKSVNGSIFDGVKMDMVSFAMDLLGSNCSDEQLIG 360
Query: 446 IQLMHSLLEKETTRARLLEKLITSTKTMARIISMLGWTSPNYMMVRLYAAKVTAELAKDL 505
+++ E LEK+ + + R++ ML W KDL
Sbjct: 361 ARILRQFAVNERFAEDTLEKIGINLPVIERLVEMLNW--------------------KDL 400
Query: 506 QVIAVPR-AMQLVSALLDTDGKLKKGNPLLQVDDEQEERQDPILSTANSQEERPNAIRNA 564
Q + R A +++S L KK N L R I S R+
Sbjct: 401 QEEEIRRSAAEILSKLAG-----KKQNSL---------RVAGISGAMESISSLLQNTRSL 446
Query: 565 DDPPKQRQQETLQGTDNLPETQTRSAHIHEQNCIIRSLQKISEYWTVPKEHPLTYHDQLP 624
+ P + ++ L H+H ++W +
Sbjct: 447 GEAPDEIGEKKL----------FHDHHLH------------YDFW------------RFN 472
Query: 625 ALGMLIVDKLASCDQNNCVEIDRVTDLIPKIIGFTSFRSDTMNSEAQQMVL-----VKSS 679
LG+LI+ KL S D +NC +I L+PKII FT + + E MVL VK S
Sbjct: 473 NLGLLILKKL-SRDHDNCGKIGNTRGLLPKIIDFTHTDATLLKDENADMVLSRVLTVKRS 531
Query: 680 LKVLQRLTSIEGEIGKALRYKISKHPFLLRNLADILGDNIRDQELKKLAVGILRNISIDG 739
L++++ L S G GK LR +IS+ F + NL D+L +R +L+KL + IL ++++
Sbjct: 532 LQLVKMLVSTSGNTGKCLRREISEIVFTISNLRDVLRHGVRYPKLQKLGIEILSFLALET 591
Query: 740 NTRQEIGNMKVLITRLMKAFL--DLHRTSNTDVDFLLPKVAGQALAMLAMDNVHNCLVML 797
+ R+ I ++ L FL +H N + + AG+A+ MLA+++ NC+ +L
Sbjct: 592 DGRERIAVTGGVLKELFSIFLKSKIHGDEN---EKRVRMAAGEAIGMLALESRSNCIQIL 648
Query: 798 KEPEFITKLKNMILIQDEKYIYV-APSLLRSMCQHAQAKLTELDLKELSHTLREVLERIM 856
K F ++ + I V A +LR++C ++ + LDL+ + VL+ I
Sbjct: 649 KLGVF----GRLVEALEVPLIRVNAARVLRNLCIYSGHECF-LDLRFIKTAAPTVLKSIT 703
Query: 857 NAEGAELEILIGLSSQICKVNPEEFAQEL--DHGHIRQRFVKRLVDALNANMKPSAHCPG 914
+ + LE+++GL++Q+ K E A + D G +Q LV L + KP+ P
Sbjct: 704 SGDNKLLEVMLGLAAQVFKFMSSEEANIVLTDSGIKKQELANSLVSILKKHDKPAIKVPR 763
Query: 915 IRRVILEQSIYMMECNSHYANCFNEFRMMDALSIVEETPSKVENYMVFLGDVG 967
IRR ++E +I+MME + F + M L V ET +++EN+ VF G VG
Sbjct: 764 IRRFVIELAIWMMEDDVENVGMFRDLGMEKELVKVLETTAELENFDVFSGTVG 816
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 31/69 (44%), Positives = 44/69 (63%), Gaps = 4/69 (5%)
Query: 37 EKWLNGFVSLVALVERVGNALGTLAFTWATVVLLGGYPTSLTALGSYNDFWFATAIIFLE 96
E+ L F +A++E++ LGTL F WATVVLLGG+ +L +DFWF T I+ +E
Sbjct: 69 EQKLTLFALRLAIIEKIATNLGTLGFIWATVVLLGGFAITLEK----SDFWFITIILLIE 124
Query: 97 SARMFSGSN 105
R+FS S+
Sbjct: 125 GTRIFSRSH 133
>AT4G14280.1 | chr4:8222518-8225074 FORWARD LENGTH=799
Length = 798
Score = 120 bits (302), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 108/378 (28%), Positives = 178/378 (47%), Gaps = 33/378 (8%)
Query: 623 LPALGMLIVDKLASCDQNNCVEIDRVTDLIPKIIGFTSFRSDTMN------SEAQQMVLV 676
L LG+LI+ +LA D NC +I + L+ KII FT + + +E +++ V
Sbjct: 431 LNNLGLLILKRLAR-DHENCGKIGKTKGLLSKIIDFTYAEKNLLENPNVAVAEPYKILAV 489
Query: 677 KSSLKVLQRLTSIEGEIGKALRYKISKHPFLLRNLADILGDNIRDQELKKLAVGILRNIS 736
K SLK+L++L S G GK LR IS F + N+ + L L+KL IL ++
Sbjct: 490 KRSLKLLKKLVSTTGTTGKNLRMTISGIVFTVSNIRETLHHGKSQPHLQKLGAEILTFLA 549
Query: 737 IDGNTRQEIGNMKVLITRLMKAFLDLHRTSNTDVDFLLPK-------VAGQALAMLAMDN 789
+ ++IG ++ L+ FL+ +PK AG+++AMLA +
Sbjct: 550 FEEGATEKIGGTGGVLKGLLCIFLNNE----------IPKDKSGVRVSAGESVAMLAQGS 599
Query: 790 VHNCLVMLKEPEFITKLKNMILIQDEKYIYV-APSLLRSMCQHAQAKLTELDLKELSHTL 848
NC +L+ LK ++ D I + A +LR++C + +KE+ +
Sbjct: 600 KSNCQKILRA----NVLKGLVEALDNPLIRLNAARILRNLCAYTAPGQFNEQMKEVIKSA 655
Query: 849 -REVLERIMNAEGAELEILIGLSSQICKV--NPEEFAQELDH-GHIRQRFVKRLVDALNA 904
VL+ I + E E+++GL+ I K+ PEE + G + K L++ L
Sbjct: 656 GATVLKAIKSEERKPQEVMVGLAPHILKLMNTPEELRGMFEEAGVTEEELAKALINILKR 715
Query: 905 NMKPSAHCPGIRRVILEQSIYMMECNSHYANCFNEFRMMDALSIVEETPSKVENYMVFLG 964
+P P IRR +E +I MM+ N F M + L V ET +++EN+ +F G
Sbjct: 716 YEQPVPKVPRIRRFAIELTIAMMKANVETVKTFQNLEMKNELETVFETAAELENFDIFSG 775
Query: 965 DVGFMECGTPLFALVDRA 982
VG G+ + L++ A
Sbjct: 776 TVGLARHGSTINELIEEA 793
Score = 67.4 bits (163), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 45/69 (65%), Gaps = 4/69 (5%)
Query: 37 EKWLNGFVSLVALVERVGNALGTLAFTWATVVLLGGYPTSLTALGSYNDFWFATAIIFLE 96
EK L F +A++E++ + LG+L F WATVVLLGG+ SL DFWF T I+ +E
Sbjct: 43 EKKLTLFALRLAVLEKIASGLGSLGFVWATVVLLGGFAGSL----EITDFWFVTVILVIE 98
Query: 97 SARMFSGSN 105
AR+FS S+
Sbjct: 99 GARLFSRSH 107
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 105/216 (48%), Gaps = 15/216 (6%)
Query: 318 LQIPAAVLRVVFAGLALSHLMALHK----NNKEDEETNLVPSLIVFYAMVTAQGILYTV- 372
LQI +A FA + +S + + + N+ + + TNL +L +FY++ A+ +L+ V
Sbjct: 197 LQIASA-----FASIFISTIQLIKQDYGGNDLKPKSTNLHAALTLFYSLALAEALLFLVE 251
Query: 373 -ACTLEIFSFIPRRSLIRRAGFRGQLGVEYVNLYYAYALEKCMEKAVFAPKKTSLGNFAM 431
A + S I + + G V ++ A +C+ ++F K + FAM
Sbjct: 252 KAYWEYMISVIHILEKVNEECGLERFGTGSVRRFFYDAYSRCLNGSIFDGLKMDMVIFAM 311
Query: 432 DSLNSDSPKNHLYGIQLMHSLLEKETTRARLLEKLITSTKTMARIISMLGWTSPNYMMVR 491
+ L ++S L G +++ + L+K+ T+ + R++ ML W N VR
Sbjct: 312 ELLVANSLDEQLIGAEILSIFSTHDDYSVDTLQKIGTNLAIIERLVEMLNWRDKNQEDVR 371
Query: 492 LYAAKVTAELA----KDLQVIAVPRAMQLVSALLDT 523
+ AA++ + LA L+V +P A++ +S+LL++
Sbjct: 372 MSAAEILSRLASKKQNSLRVAGIPGAIESISSLLES 407
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.323 0.136 0.399
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 19,708,436
Number of extensions: 793108
Number of successful extensions: 2122
Number of sequences better than 1.0e-05: 3
Number of HSP's gapped: 2107
Number of HSP's successfully gapped: 9
Length of query: 996
Length of database: 11,106,569
Length adjustment: 108
Effective length of query: 888
Effective length of database: 8,145,641
Effective search space: 7233329208
Effective search space used: 7233329208
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 117 (49.7 bits)