Os07g0530600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF299 family protein.
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Os07g0530600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF299 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 70.06 | 0.393 | 10.7 | -0.671 | 1.68 | 1.13 | 0.35 | -2.11 | -0.417 | 13.3 | 11.82 | 759 | -- | -- |
| 75.68 | 0.405 | 10.7 | -0.766 | 1.67 | 1.2 | 0.683 | -- | -0.445 | 13.5 | 9.997 | 780 | -- | -- |
| 70.46 | 0.391 | 10.7 | -0.659 | 1.72 | 1.17 | -- | -2.21 | -0.412 | 13.3 | 11.72 | 743 | -- | -- |
| 76.24 | 0.409 | 10.7 | -0.74 | 0.968 | -0.61 | -- | -- | -0.503 | 11.1 | 11.72 | 743 | -- | -- |
| 87.85 | 0.439 | 10.7 | -0.738 | -- | -1.32 | -- | -0.0781 | -0.507 | -- | 11.72 | 743 | -- | -- |
| 82.33 | 0.425 | 10.7 | -0.752 | 1.64 | -- | 0.201 | -- | -0.498 | 11.4 | -- | -- | -- | -- |
| 82.5 | 0.425 | 10.7 | -0.744 | 1.64 | -- | -- | -- | -0.498 | 11.4 | -- | -- | -- | -- |
| 86.39 | 0.433 | 10.7 | -0.751 | -- | -1.33 | -- | -- | -0.567 | -- | 12.77 | 7 | -- | -- |
| 88.49 | 0.438 | 10.6 | -- | 2.07 | 0.945 | -- | -- | -0.382 | 12 | 3.829 | 1773 | -- | -- |
| 250.3 | 0.739 | 10.7 | -0.786 | -- | -- | -- | -- | -0.514 | -- | -- | -- | -- | -- |
| 97.08 | 0.461 | 10.7 | -- | 1.64 | -- | -- | -- | -0.415 | 11.4 | -- | -- | -- | -- |
| 100.79 | 0.468 | 10.7 | -- | -- | -1.33 | -- | -- | -0.438 | -- | 11.4 | 7 | -- | -- |
| 266.6 | 0.762 | 10.7 | -- | -- | -- | -- | -- | -0.427 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 63.64 | radiation | 20.0 | 270 | < th | dose independent | rect. | 15 | 9 |
| 3 | 63.86 | humidity | 70.0 | 30 | > th | dose independent | rect. | 19 | 8 |
| 5 | 64.05 | humidity | 50.0 | 270 | > th | dose independent | rect. | 4 | 9 |
| 6 | 64.33 | humidity | 50.0 | 270 | > th | dose independent | rect. | 15 | 8 |
| 7 | 64.37 | humidity | 50.0 | 10 | > th | dose dependent | rect. | 19 | 8 |
| 11 | 64.47 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 15 | 8 |
| 13 | 64.50 | wind | 9.0 | 270 | < th | dose independent | rect. | 13 | 15 |
| 15 | 64.54 | radiation | 1.0 | 90 | < th | dose dependent | sin | 18 | NA |
| 17 | 64.63 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 13 | 15 |
| 18 | 64.63 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 13 | 15 |
| 20 | 64.85 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 3 | 16 |
| 21 | 64.85 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 3 | 16 |
| 22 | 64.86 | temperature | 10.0 | 270 | > th | dose independent | rect. | 4 | 9 |
| 23 | 64.86 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 4 | 9 |
| 24 | 64.86 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 4 | 9 |
| 25 | 64.86 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 4 | 9 |
| 26 | 64.86 | temperature | 10.0 | 270 | > th | dose independent | rect. | 13 | 15 |
| 28 | 64.86 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 4 | 9 |
| 31 | 64.92 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 17 | 8 |
| 35 | 65.01 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 11 | 14 |
| 37 | 65.02 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 3 | 16 |
| 45 | 65.17 | temperature | 25.0 | 270 | < th | dose independent | rect. | 23 | 6 |
| 47 | 65.20 | temperature | 30.0 | 90 | < th | dose independent | rect. | 18 | 7 |
| 49 | 65.25 | wind | 9.0 | 270 | < th | dose independent | rect. | 4 | 9 |
| 62 | 65.47 | radiation | 20.0 | 10 | < th | dose dependent | sin | 5 | NA |
| 73 | 65.66 | atmosphere | 995.0 | 270 | > th | dose dependent | rect. | 12 | 6 |
| 82 | 65.75 | temperature | 10.0 | 30 | > th | dose independent | rect. | 19 | 8 |
| 84 | 65.75 | humidity | 50.0 | 30 | > th | dose independent | rect. | 19 | 8 |
| 86 | 65.75 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 19 | 8 |
| 87 | 65.75 | radiation | 1.0 | 30 | < th | dose independent | rect. | 19 | 8 |
| 92 | 65.75 | temperature | 10.0 | 30 | > th | dose independent | rect. | 3 | 16 |
| 94 | 65.75 | atmosphere | 1015.0 | 30 | < th | dose independent | rect. | 3 | 16 |
| 95 | 65.75 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 19 | 8 |
| 101 | 65.78 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 24 | 15 |
| 104 | 65.80 | wind | 9.0 | 30 | < th | dose independent | rect. | 3 | 16 |
| 106 | 65.82 | wind | 9.0 | 30 | < th | dose independent | rect. | 19 | 8 |
| 109 | 65.83 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 13 | 15 |
| 110 | 65.84 | temperature | 15.0 | 270 | > th | dose independent | rect. | 15 | 9 |
| 112 | 65.88 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 20 | 6 |
| 115 | 65.88 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 20 | 6 |
| 119 | 65.88 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 20 | 6 |
| 125 | 65.88 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 20 | 6 |
| 126 | 65.88 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 20 | 6 |
| 146 | 65.88 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 2 | 18 |
| 152 | 65.90 | radiation | 30.0 | 1440 | < th | dose dependent | rect. | 20 | 6 |
| 161 | 65.96 | humidity | 80.0 | 10 | > th | dose independent | rect. | 18 | 2 |
| 168 | 66.00 | radiation | 40.0 | 14400 | < th | dose dependent | rect. | 20 | 6 |
| 174 | 66.02 | radiation | 20.0 | 10 | < th | dose dependent | rect. | 21 | 22 |
| 190 | 66.13 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 23 | 6 |
| 192 | 66.13 | wind | 9.0 | 270 | < th | dose independent | rect. | 24 | 15 |
| 193 | 66.13 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 23 | 6 |
| 223 | 66.21 | temperature | 10.0 | 270 | > th | dose independent | rect. | 24 | 15 |
| 224 | 66.21 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 24 | 15 |
| 226 | 66.21 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 24 | 15 |
| 228 | 66.22 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 24 | 15 |
| 232 | 66.25 | temperature | 25.0 | 270 | < th | dose independent | rect. | 1 | 2 |
| 238 | 66.28 | temperature | 15.0 | 270 | > th | dose independent | rect. | 23 | 6 |
| 275 | 66.30 | wind | 9.0 | 270 | < th | dose independent | rect. | 15 | 9 |
| 284 | 66.32 | wind | 9.0 | 270 | < th | dose independent | rect. | 23 | 6 |
| 287 | 66.32 | humidity | 50.0 | 270 | > th | dose independent | rect. | 23 | 6 |
| 290 | 66.32 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 23 | 6 |
| 291 | 66.32 | radiation | 1.0 | 270 | < th | dose independent | rect. | 23 | 6 |
| 297 | 66.32 | temperature | 10.0 | 270 | > th | dose independent | rect. | 5 | 18 |
| 298 | 66.32 | radiation | 10.0 | 270 | < th | dose dependent | rect. | 23 | 6 |
| 305 | 66.33 | radiation | 20.0 | 10 | < th | dose dependent | rect. | 3 | 16 |
| 332 | 66.48 | humidity | 50.0 | 270 | > th | dose independent | rect. | 5 | 18 |
| 334 | 66.49 | radiation | 20.0 | 10 | < th | dose dependent | rect. | 1 | 18 |
| 357 | 66.59 | wind | 9.0 | 270 | < th | dose independent | rect. | 5 | 18 |
| 384 | 66.67 | wind | 1.0 | 270 | > th | dose independent | rect. | 16 | 8 |
| 406 | 66.75 | atmosphere | 995.0 | 30 | > th | dose dependent | rect. | 13 | 6 |
| 423 | 66.77 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 23 | 6 |
| 430 | 66.79 | radiation | 10.0 | 90 | < th | dose dependent | rect. | 1 | 16 |
| 432 | 66.79 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 23 | 16 |
| 450 | 66.87 | radiation | 1.0 | 270 | < th | dose independent | rect. | 23 | 16 |
| 453 | 66.88 | radiation | 1.0 | 90 | < th | dose independent | rect. | 12 | 13 |
| 460 | 66.88 | wind | 9.0 | 270 | < th | dose dependent | rect. | 15 | 8 |
| 469 | 66.92 | wind | 9.0 | 270 | < th | dose dependent | rect. | 5 | 16 |
| 483 | 66.97 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 5 | 18 |
| 490 | 66.98 | wind | 9.0 | 270 | < th | dose dependent | rect. | 23 | 6 |
| 507 | 67.06 | humidity | 70.0 | 10 | > th | dose dependent | rect. | 19 | 1 |
| 513 | 67.07 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 19 | 8 |
| 517 | 67.07 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 19 | 8 |
| 518 | 67.08 | humidity | 50.0 | 270 | > th | dose independent | rect. | 5 | 16 |
| 536 | 67.16 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 23 | 6 |
| 537 | 67.17 | radiation | 1.0 | 270 | < th | dose independent | sin | 21 | NA |
| 567 | 67.23 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 5 | 18 |
| 576 | 67.23 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 5 | 18 |
| 578 | 67.24 | atmosphere | 1015.0 | 30 | < th | dose independent | rect. | 19 | 8 |
| 607 | 67.27 | wind | 9.0 | 270 | < th | dose dependent | rect. | 5 | 18 |
| 616 | 67.29 | radiation | 10.0 | 10 | < th | dose independent | rect. | 21 | 22 |
| 655 | 67.34 | radiation | 10.0 | 90 | < th | dose dependent | rect. | 1 | 9 |
| 659 | 67.35 | humidity | 60.0 | 720 | > th | dose independent | rect. | 17 | 17 |
| 661 | 67.35 | radiation | 10.0 | 30 | < th | dose dependent | rect. | 3 | 14 |
| 717 | 67.44 | radiation | 10.0 | 90 | < th | dose dependent | rect. | 1 | 12 |
| 791 | 67.63 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 24 | 4 |
| 799 | 67.63 | temperature | 30.0 | 270 | < th | dose independent | rect. | 18 | 16 |
| 838 | 67.68 | radiation | 1.0 | 90 | < th | dose independent | rect. | 1 | 16 |
| 895 | 67.75 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 14 | 6 |
| 899 | 67.75 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 20 | 18 |
| 902 | 67.75 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 20 | 18 |
| 907 | 67.76 | wind | 3.0 | 270 | > th | dose independent | rect. | 12 | 6 |
| 909 | 67.77 | radiation | 30.0 | 10 | < th | dose dependent | rect. | 1 | 10 |
| 925 | 67.82 | radiation | 10.0 | 10 | < th | dose independent | rect. | 1 | 18 |
| 966 | 67.87 | radiation | 1.0 | 270 | < th | dose independent | sin | 7 | NA |