Os07g0521300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
FiT-DB / Search/ Help/ Sample detail
|
Os07g0521300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Conserved hypothetical protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 154.26 | 0.584 | 5.27 | 3.86 | 0.0365 | -2.1 | 1.31 | 2.98 | 1.07 | 17.1 | 21.79 | 5809 | -- | -- |
| 152.59 | 0.575 | 5.28 | 3.76 | 0.0145 | -2.61 | -1.09 | -- | 1.32 | 4.14 | 17.06 | 11507 | -- | -- |
| 158.05 | 0.586 | 5.28 | 3.8 | 0.108 | -2.11 | -- | 2.87 | 1.04 | 22 | 21.85 | 5653 | -- | -- |
| 156.25 | 0.582 | 5.29 | 3.7 | 0.104 | -2.6 | -- | -- | 1.28 | 22.3 | 16.82 | 11305 | -- | -- |
| 158.56 | 0.586 | 5.27 | 3.89 | -- | -2.12 | -- | 3.16 | 1.06 | -- | 22.1 | 5698 | -- | -- |
| 284.99 | 0.791 | 5.5 | 2.04 | 0.0974 | -- | 1.41 | -- | 0.337 | 16.7 | -- | -- | -- | -- |
| 290.18 | 0.798 | 5.5 | 2.04 | 0.113 | -- | -- | -- | 0.344 | 17.8 | -- | -- | -- | -- |
| 156.69 | 0.583 | 5.28 | 3.73 | -- | -2.61 | -- | -- | 1.3 | -- | 16.86 | 11505 | -- | -- |
| 354.37 | 0.877 | 5.52 | -- | 0.37 | -1.24 | -- | -- | 0.302 | 21.7 | 22.3 | 997 | -- | -- |
| 290.85 | 0.797 | 5.5 | 2.04 | -- | -- | -- | -- | 0.341 | -- | -- | -- | -- | -- |
| 400.07 | 0.936 | 5.55 | -- | 0.0849 | -- | -- | -- | 0.117 | 18.9 | -- | -- | -- | -- |
| 346.74 | 0.867 | 5.51 | -- | -- | -0.992 | -- | -- | 0.309 | -- | 27.31 | 7171 | -- | -- |
| 400.45 | 0.934 | 5.55 | -- | -- | -- | -- | -- | 0.115 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 147.52 | humidity | 90 | 43200 | < th | dose independent | rect. | 18 | 1 |
| 2 | 148.10 | humidity | 90 | 43200 | < th | dose independent | rect. | 17 | 3 |
| 3 | 148.11 | humidity | 90 | 43200 | > th | dose dependent | rect. | 21 | 2 |
| 4 | 148.15 | humidity | 90 | 43200 | > th | dose independent | rect. | 17 | 6 |
| 7 | 148.25 | humidity | 90 | 43200 | > th | dose independent | rect. | 21 | 2 |
| 9 | 148.47 | humidity | 90 | 43200 | < th | dose independent | rect. | 17 | 5 |
| 28 | 149.32 | humidity | 90 | 43200 | > th | dose dependent | rect. | 17 | 7 |
| 44 | 149.95 | atmosphere | 1005 | 43200 | > th | dose independent | rect. | 18 | 1 |
| 53 | 150.54 | atmosphere | 1005 | 43200 | > th | dose independent | rect. | 16 | 1 |
| 65 | 150.90 | atmosphere | 1005 | 43200 | < th | dose independent | rect. | 18 | 1 |
| 73 | 151.21 | atmosphere | 1005 | 43200 | > th | dose independent | rect. | 16 | 3 |
| 99 | 151.95 | temperature | 20 | 14400 | > th | dose dependent | rect. | 14 | 12 |
| 100 | 151.95 | temperature | 20 | 14400 | > th | dose dependent | rect. | 13 | 14 |
| 124 | 152.10 | temperature | 20 | 14400 | > th | dose dependent | sin | 15 | NA |
| 149 | 152.28 | temperature | 20 | 43200 | > th | dose independent | rect. | 20 | 1 |
| 171 | 152.38 | temperature | 25 | 14400 | > th | dose dependent | rect. | 15 | 1 |
| 172 | 152.39 | humidity | 90 | 43200 | < th | dose independent | rect. | 9 | 2 |
| 178 | 152.46 | humidity | 90 | 43200 | > th | dose independent | rect. | 9 | 1 |
| 179 | 152.46 | temperature | 20 | 43200 | < th | dose independent | rect. | 20 | 2 |
| 195 | 152.54 | humidity | 80 | 43200 | > th | dose dependent | rect. | 17 | 1 |
| 226 | 152.72 | humidity | 80 | 43200 | > th | dose dependent | rect. | 10 | 1 |
| 242 | 152.78 | humidity | 90 | 43200 | > th | dose independent | sin | 18 | NA |
| 247 | 152.80 | humidity | 90 | 43200 | > th | dose independent | rect. | 9 | 16 |
| 252 | 152.82 | temperature | 20 | 14400 | > th | dose dependent | rect. | 21 | 1 |
| 257 | 152.84 | humidity | 90 | 43200 | < th | dose independent | sin | 18 | NA |
| 270 | 152.90 | temperature | 20 | 14400 | > th | dose dependent | rect. | 5 | 22 |
| 273 | 152.91 | temperature | 20 | 14400 | > th | dose dependent | no | NA | NA |
| 280 | 152.91 | temperature | 20 | 14400 | > th | dose dependent | rect. | 24 | 23 |
| 287 | 152.92 | temperature | 20 | 14400 | > th | dose dependent | rect. | 19 | 23 |
| 300 | 152.96 | temperature | 10 | 14400 | > th | dose dependent | rect. | 1 | 1 |
| 315 | 152.98 | temperature | 20 | 14400 | > th | dose dependent | rect. | 17 | 23 |
| 328 | 153.01 | temperature | 30 | 14400 | < th | dose dependent | rect. | 1 | 1 |
| 337 | 153.03 | temperature | 10 | 14400 | > th | dose dependent | rect. | 21 | 6 |
| 343 | 153.04 | temperature | 30 | 14400 | < th | dose dependent | rect. | 21 | 6 |
| 405 | 153.18 | humidity | 90 | 43200 | > th | dose dependent | sin | 18 | NA |
| 413 | 153.21 | humidity | 80 | 43200 | > th | dose independent | rect. | 11 | 4 |
| 443 | 153.29 | humidity | 90 | 43200 | < th | dose independent | rect. | 9 | 16 |
| 453 | 153.31 | humidity | 90 | 43200 | > th | dose dependent | rect. | 9 | 16 |
| 461 | 153.33 | humidity | 80 | 43200 | < th | dose independent | rect. | 11 | 4 |
| 497 | 153.39 | temperature | 15 | 14400 | > th | dose dependent | rect. | 19 | 12 |
| 717 | 153.75 | temperature | 30 | 14400 | < th | dose dependent | sin | 11 | NA |
| 790 | 153.85 | temperature | 25 | 14400 | < th | dose independent | rect. | 24 | 21 |
| 873 | 153.96 | temperature | 25 | 14400 | > th | dose independent | rect. | 23 | 22 |
| 933 | 154.05 | temperature | 25 | 14400 | < th | dose independent | rect. | 10 | 22 |
| 990 | 154.11 | temperature | 25 | 14400 | > th | dose independent | rect. | 10 | 22 |