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Os07g0520900

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Patatin family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 8.76 (0.0162) R2 : 0.535
β1 : 0.87 (0.0592) R2dD : 0.228 R2D : 0.193
β2 : 0.696 (0.0414) R2dC : 0.29 R2C : 0.297
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.192 (0.0345) R2dN8 : 0.0424 R2N8 : 0.00481
σ : 0.304
deviance : 42.16
__
_____
C
peak time of C : 4.24
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
38 0.29 8.75 0.879 0.372 0.45 0.216 -0.802 0.215 6.91 11.58 294 -- --
40.32 0.298 8.77 0.858 0.769 -0.14 -0.784 -- 0.186 3.37 9.998 299 -- --
38.11 0.288 8.75 0.888 0.383 0.439 -- -0.802 0.216 6.74 12.07 287 -- --
40.47 0.296 8.76 0.91 0.521 0.412 -- -- 0.221 5.29 69.23 218 -- --
41.08 0.299 8.76 0.907 -- 0.674 -- -0.778 0.234 -- 5.3 474 -- --
40.76 0.299 8.76 0.861 0.696 -- -0.722 -- 0.188 4.03 -- -- -- --
42.16 0.304 8.76 0.87 0.696 -- -- -- 0.192 4.24 -- -- -- --
42.79 0.305 8.76 0.886 -- 0.687 -- -- 0.229 -- 6.33 498 -- --
60.76 0.363 8.77 -- 0.568 0.319 -- -- 0.113 5.08 80.36 187 -- --
68.36 0.386 8.76 0.897 -- -- -- -- 0.211 -- -- -- -- --
62.09 0.369 8.78 -- 0.713 -- -- -- 0.0954 4.22 -- -- -- --
62.73 0.369 8.78 -- -- 0.706 -- -- 0.135 -- 10 482 -- --
89.61 0.442 8.78 -- -- -- -- -- 0.111 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 34.59 temperature 15.0 270 > th dose dependent rect. 5 1
2 34.65 temperature 20.0 270 > th dose independent rect. 5 1
3 34.66 temperature 20.0 30 > th dose independent rect. 5 4
5 34.74 radiation 1.0 270 > th dose independent rect. 7 11
7 34.77 radiation 1.0 30 > th dose independent sin 8 NA
12 34.85 radiation 1.0 270 > th dose independent rect. 7 22
23 34.88 radiation 1.0 90 < th dose dependent sin 10 NA
31 35.03 temperature 15.0 270 > th dose dependent rect. 4 3
37 35.10 radiation 1.0 30 < th dose independent sin 9 NA
38 35.10 radiation 1.0 90 > th dose independent rect. 5 2
50 35.11 temperature 20.0 30 > th dose dependent rect. 5 2
55 35.20 radiation 1.0 90 < th dose dependent rect. 21 10
57 35.23 radiation 1.0 90 < th dose dependent rect. 21 13
60 35.24 temperature 15.0 30 > th dose dependent rect. 5 4
101 35.42 wind 1.0 270 > th dose independent rect. 7 10
102 35.43 radiation 30.0 90 < th dose independent rect. 5 6
106 35.45 wind 5.0 30 < th dose dependent rect. 5 5
111 35.48 radiation 1.0 90 < th dose independent rect. 21 10
115 35.50 wind 5.0 270 < th dose independent rect. 4 3
130 35.52 radiation 10.0 270 < th dose independent rect. 5 1
134 35.52 precipitation 0.1 90 < th dose independent rect. 9 20
135 35.52 precipitation 0.1 90 < th dose dependent rect. 9 20
139 35.54 radiation 10.0 270 < th dose independent rect. 4 3
140 35.54 precipitation 0.1 270 < th dose independent rect. 7 21
142 35.54 precipitation 0.1 270 < th dose dependent rect. 7 21
156 35.65 temperature 30.0 90 < th dose independent rect. 5 4
162 35.66 precipitation 0.1 270 < th dose independent rect. 7 10
164 35.66 radiation 40.0 90 < th dose dependent rect. 5 6
165 35.66 precipitation 0.1 270 < th dose dependent rect. 7 10
168 35.68 radiation 1.0 90 < th dose independent rect. 21 13
171 35.68 radiation 1.0 30 > th dose dependent rect. 5 2
183 35.69 wind 5.0 270 < th dose independent rect. 5 1
191 35.70 atmosphere 995.0 90 > th dose dependent rect. 5 4
195 35.71 precipitation 0.1 90 < th dose independent rect. 5 4
198 35.71 humidity 50.0 90 > th dose dependent rect. 5 4
199 35.71 precipitation 0.1 90 < th dose dependent rect. 5 4
202 35.73 temperature 10.0 90 > th dose independent rect. 5 4
204 35.73 humidity 50.0 90 > th dose independent rect. 5 4
205 35.73 atmosphere 995.0 90 > th dose independent rect. 5 4
206 35.73 atmosphere 1015.0 90 < th dose independent rect. 5 4
208 35.73 temperature 10.0 90 > th dose independent rect. 9 20
252 35.78 wind 9.0 270 < th dose independent rect. 17 14
254 35.79 atmosphere 1010.0 270 < th dose independent rect. 5 1
266 35.80 atmosphere 995.0 270 > th dose independent rect. 17 14
267 35.80 wind 1.0 90 > th dose independent rect. 9 20
280 35.81 temperature 10.0 270 > th dose independent rect. 7 10
281 35.81 atmosphere 1015.0 270 < th dose independent rect. 7 10
282 35.81 temperature 10.0 270 > th dose independent rect. 17 14
283 35.81 radiation 30.0 270 < th dose independent rect. 17 14
286 35.81 temperature 10.0 270 > th dose independent rect. 7 21
292 35.82 temperature 30.0 10 < th dose independent rect. 5 5
295 35.82 radiation 40.0 270 < th dose dependent rect. 4 3
326 35.84 temperature 20.0 30 > th dose independent rect. 5 17
328 35.85 humidity 50.0 270 > th dose independent rect. 17 14
342 35.89 precipitation 0.1 270 < th dose independent rect. 5 1
345 35.89 wind 9.0 90 < th dose independent rect. 5 16
348 35.89 precipitation 0.1 270 < th dose dependent rect. 5 1
354 35.90 wind 9.0 270 < th dose dependent rect. 5 1
360 35.91 humidity 80.0 270 > th dose independent rect. 5 1
368 35.92 temperature 10.0 270 > th dose independent rect. 5 1
370 35.92 temperature 30.0 270 < th dose independent rect. 5 1
371 35.92 humidity 50.0 270 > th dose independent rect. 5 1
374 35.92 atmosphere 995.0 270 > th dose independent rect. 5 1
381 35.92 wind 9.0 90 < th dose independent rect. 9 20
382 35.92 temperature 10.0 270 > th dose independent rect. 6 23
396 35.95 wind 9.0 270 < th dose independent rect. 7 21
398 35.95 radiation 30.0 270 < th dose dependent rect. 16 15
415 35.97 radiation 40.0 270 < th dose dependent rect. 5 1
417 35.97 radiation 30.0 270 < th dose dependent rect. 3 8
418 35.97 radiation 40.0 90 < th dose dependent rect. 5 8
425 35.98 temperature 10.0 90 > th dose dependent rect. 9 19
434 35.99 radiation 30.0 90 < th dose independent rect. 4 9
435 35.99 atmosphere 995.0 270 > th dose dependent rect. 5 1
443 36.00 radiation 30.0 90 < th dose independent rect. 4 11
444 36.00 radiation 30.0 270 < th dose dependent rect. 3 6
462 36.01 humidity 50.0 270 > th dose dependent rect. 5 1
468 36.02 wind 9.0 90 < th dose independent rect. 21 8
477 36.03 precipitation 0.1 10 < th dose independent rect. 10 19
482 36.03 precipitation 0.1 10 < th dose dependent rect. 10 19
493 36.04 temperature 10.0 90 > th dose independent rect. 21 8
494 36.04 temperature 30.0 90 < th dose independent rect. 21 8
495 36.04 humidity 50.0 90 > th dose independent rect. 21 8
498 36.04 atmosphere 995.0 90 > th dose independent rect. 21 8
499 36.04 radiation 20.0 90 < th dose independent rect. 21 8
509 36.04 atmosphere 1015.0 90 < th dose independent rect. 5 16
531 36.05 precipitation 0.1 90 < th dose independent rect. 21 8
532 36.05 wind 9.0 270 < th dose independent rect. 7 10
538 36.05 precipitation 0.1 90 < th dose dependent rect. 21 8
539 36.05 radiation 40.0 270 < th dose dependent rect. 3 14
544 36.06 atmosphere 1015.0 90 < th dose independent rect. 9 20
547 36.07 precipitation 0.1 10 < th dose independent rect. 5 5
548 36.07 radiation 40.0 90 < th dose independent rect. 5 16
552 36.07 precipitation 0.1 10 < th dose dependent rect. 5 5
554 36.08 temperature 10.0 10 > th dose independent rect. 5 5
557 36.08 atmosphere 995.0 10 > th dose independent rect. 5 5
558 36.08 atmosphere 1015.0 10 < th dose independent rect. 5 5
561 36.08 temperature 10.0 10 > th dose independent rect. 10 19
578 36.10 temperature 30.0 90 < th dose independent rect. 5 16
583 36.10 wind 9.0 30 < th dose dependent rect. 5 13
591 36.11 radiation 40.0 270 < th dose dependent rect. 3 12
603 36.12 wind 9.0 90 < th dose dependent rect. 5 16
646 36.15 radiation 30.0 270 < th dose independent rect. 3 15
655 36.15 radiation 40.0 90 < th dose dependent rect. 5 10
665 36.16 humidity 70.0 270 > th dose independent rect. 14 17
693 36.17 radiation 1.0 90 < th dose dependent rect. 21 22
698 36.18 temperature 20.0 10 > th dose independent rect. 5 7
704 36.19 atmosphere 1015.0 30 < th dose independent rect. 22 7
705 36.19 radiation 20.0 10 < th dose independent rect. 5 7
712 36.20 atmosphere 1015.0 10 < th dose independent rect. 10 19
718 36.21 temperature 30.0 270 < th dose independent rect. 17 14
730 36.22 radiation 1.0 270 > th dose independent sin 0 NA
756 36.22 wind 9.0 10 < th dose independent rect. 10 19
757 36.22 wind 1.0 270 > th dose independent rect. 7 20
779 36.23 temperature 10.0 10 > th dose dependent rect. 10 19
784 36.24 temperature 20.0 30 > th dose independent rect. 5 13
798 36.25 temperature 30.0 270 < th dose independent rect. 3 15
814 36.26 precipitation 0.1 270 < th dose independent rect. 17 14
821 36.26 precipitation 0.1 270 < th dose dependent rect. 17 14
822 36.26 humidity 60.0 90 > th dose dependent rect. 5 16
864 36.28 wind 1.0 90 > th dose independent rect. 9 10
865 36.28 precipitation 0.1 90 < th dose independent rect. 9 10
875 36.28 precipitation 0.1 90 < th dose dependent rect. 9 10
887 36.30 atmosphere 995.0 90 > th dose independent rect. 5 16
888 36.30 precipitation 0.1 10 < th dose independent rect. 5 17
892 36.30 precipitation 0.1 10 < th dose dependent rect. 5 17
897 36.31 temperature 15.0 90 > th dose independent rect. 19 14
911 36.32 atmosphere 995.0 270 > th dose independent rect. 7 10
917 36.32 humidity 50.0 30 > th dose dependent rect. 22 7
921 36.32 wind 9.0 270 < th dose dependent rect. 3 15
952 36.34 atmosphere 1015.0 270 < th dose independent rect. 7 20