Os07g0514400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Tetratricopeptide-like helical domain containing protein.
FiT-DB / Search/ Help/ Sample detail
|
Os07g0514400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Tetratricopeptide-like helical domain containing protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = precipitation,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 134.76 | 0.545 | 3.09 | -0.419 | 0.0268 | 1.45 | 0.79 | -4.56 | 0.0961 | 18.8 | 0.4538 | 3000 | -- | -- |
| 148.31 | 0.567 | 3 | -0.52 | 0.0127 | 1.05 | 0.671 | -- | 0.12 | 18.6 | 0.5 | 3290 | -- | -- |
| 136.15 | 0.543 | 3.09 | -0.445 | 0.0635 | 1.43 | -- | -4.62 | 0.0946 | 14.9 | 0.3831 | 3000 | -- | -- |
| 147.38 | 0.565 | 3.01 | -0.411 | 0.109 | 0.731 | -- | -- | 0.116 | 14.6 | 0.3721 | 6052 | -- | -- |
| 136.39 | 0.544 | 3.09 | -0.429 | -- | 1.45 | -- | -4.67 | 0.097 | -- | 0.3719 | 3000 | -- | -- |
| 155.28 | 0.584 | 3.04 | -0.297 | 0.0365 | -- | -0.879 | -- | 0.0191 | 8.31 | -- | -- | -- | -- |
| 156.79 | 0.586 | 3.03 | -0.318 | 0.126 | -- | -- | -- | 0.0226 | 13.5 | -- | -- | -- | -- |
| 148.07 | 0.567 | 3.01 | -0.416 | -- | 0.739 | -- | -- | 0.114 | -- | 0.371 | 6052 | -- | -- |
| 151.64 | 0.574 | 3 | -- | 0.123 | 0.663 | -- | -- | 0.154 | 14.3 | 0.3852 | 6090 | -- | -- |
| 157.76 | 0.587 | 3.04 | -0.323 | -- | -- | -- | -- | 0.0199 | -- | -- | -- | -- | -- |
| 159.46 | 0.591 | 3.03 | -- | 0.131 | -- | -- | -- | 0.058 | 13.6 | -- | -- | -- | -- |
| 152.36 | 0.575 | 3.01 | -- | -- | 0.622 | -- | -- | 0.151 | -- | 0.4115 | 6410 | -- | -- |
| 160.52 | 0.591 | 3.03 | -- | -- | -- | -- | -- | 0.0558 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 130.84 | wind | 1.0 | 90 | < th | dose independent | rect. | 9 | 2 |
| 2 | 132.35 | temperature | 20.0 | 270 | < th | dose independent | rect. | 9 | 1 |
| 13 | 137.35 | humidity | 60.0 | 1440 | > th | dose independent | rect. | 24 | 9 |
| 14 | 137.78 | humidity | 60.0 | 1440 | > th | dose independent | rect. | 2 | 7 |
| 18 | 138.06 | humidity | 60.0 | 1440 | > th | dose independent | rect. | 22 | 11 |
| 20 | 138.10 | humidity | 60.0 | 1440 | > th | dose independent | rect. | 6 | 3 |
| 22 | 138.31 | humidity | 60.0 | 90 | < th | dose independent | rect. | 18 | 15 |
| 23 | 138.32 | humidity | 60.0 | 90 | < th | dose dependent | rect. | 18 | 15 |
| 27 | 138.48 | wind | 1.0 | 30 | < th | dose dependent | rect. | 9 | 3 |
| 31 | 138.53 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 8 | 1 |
| 33 | 138.53 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 8 | 1 |
| 35 | 138.57 | radiation | 10.0 | 90 | < th | dose independent | rect. | 9 | 2 |
| 36 | 138.58 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 21 | 2 |
| 37 | 138.58 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 21 | 2 |
| 40 | 138.64 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 8 | 1 |
| 41 | 138.64 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 8 | 1 |
| 42 | 138.66 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 21 | 2 |
| 52 | 138.75 | wind | 1.0 | 4320 | < th | dose dependent | rect. | 19 | 1 |
| 58 | 138.80 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 21 | 3 |
| 68 | 138.89 | humidity | 60.0 | 1440 | < th | dose independent | rect. | 8 | 1 |
| 82 | 138.90 | humidity | 60.0 | 1440 | < th | dose dependent | rect. | 8 | 1 |
| 99 | 138.96 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 11 | 1 |
| 101 | 138.96 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 11 | 1 |
| 102 | 138.97 | humidity | 60.0 | 270 | < th | dose independent | rect. | 8 | 1 |
| 129 | 138.97 | humidity | 60.0 | 270 | < th | dose dependent | rect. | 8 | 1 |
| 155 | 138.99 | humidity | 60.0 | 30 | < th | dose independent | rect. | 9 | 1 |
| 187 | 138.99 | humidity | 60.0 | 10 | < th | dose dependent | rect. | 9 | 1 |
| 260 | 139.01 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 11 | 1 |
| 262 | 139.01 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 11 | 1 |
| 332 | 139.08 | wind | 1.0 | 10 | < th | dose dependent | rect. | 9 | 1 |
| 336 | 139.10 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 9 | 1 |
| 337 | 139.11 | wind | 1.0 | 10 | < th | dose dependent | rect. | 9 | 9 |
| 375 | 139.31 | wind | 1.0 | 10 | < th | dose independent | rect. | 9 | 1 |
| 383 | 139.41 | radiation | 40.0 | 30 | > th | dose dependent | rect. | 9 | 2 |
| 417 | 139.42 | radiation | 10.0 | 90 | < th | dose dependent | rect. | 10 | 1 |
| 476 | 139.54 | wind | 1.0 | 10 | < th | dose independent | rect. | 9 | 9 |
| 497 | 139.66 | wind | 1.0 | 4320 | < th | dose independent | rect. | 19 | 1 |
| 525 | 139.77 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 24 | 1 |
| 597 | 139.99 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 16 | 1 |
| 598 | 139.99 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 16 | 1 |
| 628 | 140.31 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 16 | 1 |
| 629 | 140.32 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 16 | 1 |
| 637 | 140.45 | wind | 1.0 | 4320 | > th | dose independent | rect. | 19 | 1 |
| 643 | 140.57 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 24 | 10 |
| 645 | 140.59 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 22 | 3 |
| 646 | 140.59 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 24 | 4 |
| 650 | 140.62 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 24 | 8 |
| 651 | 140.64 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 18 | 1 |
| 654 | 140.67 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 16 | 3 |
| 656 | 140.68 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 3 | 7 |
| 663 | 140.72 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 5 | 5 |
| 664 | 140.73 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 16 | 3 |
| 665 | 140.73 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 16 | 3 |
| 668 | 140.75 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 22 | 12 |
| 676 | 140.78 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 3 | 1 |
| 682 | 140.79 | atmosphere | 995.0 | 14400 | < th | dose dependent | rect. | 18 | 8 |
| 693 | 140.82 | atmosphere | 995.0 | 14400 | < th | dose dependent | sin | 7 | NA |
| 700 | 140.84 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 5 | 3 |
| 704 | 140.84 | atmosphere | 995.0 | 14400 | < th | dose dependent | sin | 10 | NA |
| 738 | 140.91 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 19 | 15 |
| 748 | 140.94 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 19 | 13 |
| 756 | 140.97 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 19 | 6 |
| 771 | 141.01 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 19 | 9 |
| 788 | 141.05 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 18 | 1 |
| 799 | 141.08 | atmosphere | 995.0 | 14400 | < th | dose dependent | rect. | 21 | 18 |
| 802 | 141.09 | atmosphere | 995.0 | 14400 | < th | dose independent | sin | 8 | NA |
| 805 | 141.10 | atmosphere | 995.0 | 14400 | < th | dose independent | rect. | 1 | 1 |
| 810 | 141.10 | atmosphere | 995.0 | 14400 | < th | dose independent | rect. | 21 | 1 |
| 814 | 141.10 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 18 | 1 |
| 957 | 141.10 | atmosphere | 995.0 | 14400 | < th | dose dependent | rect. | 1 | 1 |
| 962 | 141.10 | atmosphere | 995.0 | 14400 | < th | dose dependent | rect. | 21 | 1 |
| 966 | 141.10 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 18 | 1 |