Os07g0493400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : 3-oxo-5-alpha-steroid 4-dehydrogenase, C-terminal domain containing protein.
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Os07g0493400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : 3-oxo-5-alpha-steroid 4-dehydrogenase, C-terminal domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 95.82 | 0.46 | 7.53 | -0.493 | 1.98 | -1.11 | 0.416 | -0.682 | -0.339 | 8.78 | 8.626 | 74 | -- | -- |
| 97.06 | 0.459 | 7.53 | -0.507 | 1.97 | -1.1 | 1.08 | -- | -0.342 | 8.88 | 8.24 | 69 | -- | -- |
| 96.25 | 0.457 | 7.53 | -0.477 | 2.01 | -1.1 | -- | -0.758 | -0.329 | 8.79 | 8.874 | 75 | -- | -- |
| 100.88 | 0.468 | 7.53 | -0.47 | 1.96 | -1.13 | -- | -- | -0.338 | 8.75 | 8.72 | 75 | -- | -- |
| 193.89 | 0.649 | 7.63 | -0.493 | -- | -2.14 | -- | -0.726 | -0.435 | -- | 6.961 | 8 | -- | -- |
| 116.02 | 0.505 | 7.5 | -0.522 | 2.9 | -- | 1.05 | -- | -0.265 | 10.2 | -- | -- | -- | -- |
| 120.41 | 0.514 | 7.49 | -0.48 | 2.89 | -- | -- | -- | -0.263 | 10.2 | -- | -- | -- | -- |
| 195.84 | 0.652 | 7.61 | -0.389 | -- | -2.08 | -- | -- | -0.351 | -- | 7.1 | 8 | -- | -- |
| 106.57 | 0.481 | 7.52 | -- | 1.95 | -1.14 | -- | -- | -0.286 | 8.79 | 9.47 | 70 | -- | -- |
| 627.62 | 1.17 | 7.57 | -0.521 | -- | -- | -- | -- | -0.268 | -- | -- | -- | -- | -- |
| 126.49 | 0.526 | 7.48 | -- | 2.89 | -- | -- | -- | -0.209 | 10.2 | -- | -- | -- | -- |
| 200.92 | 0.66 | 7.58 | -- | -- | -2.08 | -- | -- | -0.293 | -- | 7.1 | 8 | -- | -- |
| 634.79 | 1.18 | 7.56 | -- | -- | -- | -- | -- | -0.21 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 96.05 | radiation | 10.0 | 90 | < th | dose dependent | rect. | 17 | 23 |
| 2 | 96.72 | radiation | 10.0 | 90 | < th | dose dependent | no | NA | NA |
| 3 | 96.74 | temperature | 25.0 | 10 | > th | dose independent | rect. | 5 | 6 |
| 4 | 96.83 | radiation | 10.0 | 90 | < th | dose dependent | rect. | 12 | 23 |
| 8 | 97.16 | radiation | 10.0 | 90 | < th | dose dependent | rect. | 9 | 23 |
| 10 | 97.21 | radiation | 10.0 | 90 | < th | dose dependent | rect. | 15 | 23 |
| 13 | 97.49 | radiation | 10.0 | 30 | > th | dose independent | sin | 10 | NA |
| 15 | 97.58 | humidity | 70.0 | 10 | > th | dose dependent | rect. | 7 | 23 |
| 18 | 97.85 | radiation | 20.0 | 30 | < th | dose dependent | sin | 9 | NA |
| 32 | 98.19 | temperature | 25.0 | 10 | > th | dose independent | rect. | 1 | 10 |
| 36 | 98.20 | humidity | 60.0 | 10 | > th | dose dependent | rect. | 9 | 23 |
| 37 | 98.21 | radiation | 10.0 | 90 | < th | dose dependent | rect. | 7 | 23 |
| 40 | 98.27 | humidity | 70.0 | 10 | > th | dose dependent | rect. | 22 | 23 |
| 50 | 98.59 | radiation | 10.0 | 90 | < th | dose dependent | rect. | 21 | 23 |
| 57 | 98.77 | humidity | 80.0 | 10 | > th | dose independent | rect. | 7 | 23 |
| 63 | 98.87 | radiation | 10.0 | 30 | < th | dose dependent | sin | 4 | NA |
| 65 | 98.91 | radiation | 10.0 | 90 | < th | dose dependent | rect. | 5 | 23 |
| 81 | 99.15 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 24 | 17 |
| 87 | 99.24 | humidity | 80.0 | 10 | > th | dose dependent | sin | 0 | NA |
| 91 | 99.29 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 2 | 15 |
| 106 | 99.49 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 20 | 21 |
| 111 | 99.58 | precipitation | 0.1 | 270 | < th | dose independent | sin | 4 | NA |
| 112 | 99.58 | precipitation | 0.1 | 270 | < th | dose dependent | sin | 4 | NA |
| 115 | 99.60 | precipitation | 0.1 | 270 | > th | dose independent | sin | 3 | NA |
| 127 | 99.79 | radiation | 1.0 | 90 | > th | dose dependent | sin | 11 | NA |
| 137 | 99.91 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 2 | 15 |
| 138 | 99.92 | humidity | 60.0 | 30 | > th | dose dependent | rect. | 9 | 21 |
| 140 | 99.95 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 23 | 18 |
| 148 | 100.00 | humidity | 90.0 | 30 | < th | dose independent | rect. | 6 | 12 |
| 153 | 100.04 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 20 | 21 |
| 160 | 100.14 | radiation | 10.0 | 30 | > th | dose independent | rect. | 17 | 18 |
| 161 | 100.14 | humidity | 50.0 | 10 | > th | dose dependent | rect. | 11 | 23 |
| 168 | 100.19 | humidity | 70.0 | 10 | > th | dose dependent | no | NA | NA |
| 169 | 100.19 | humidity | 70.0 | 10 | > th | dose dependent | rect. | 24 | 21 |
| 179 | 100.25 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 2 | 13 |
| 183 | 100.29 | humidity | 70.0 | 10 | > th | dose dependent | rect. | 15 | 23 |
| 184 | 100.29 | humidity | 70.0 | 10 | > th | dose dependent | rect. | 17 | 23 |
| 192 | 100.34 | humidity | 70.0 | 10 | > th | dose dependent | rect. | 2 | 17 |
| 200 | 100.42 | humidity | 70.0 | 10 | > th | dose dependent | rect. | 13 | 23 |
| 201 | 100.43 | humidity | 70.0 | 10 | > th | dose dependent | rect. | 24 | 19 |
| 204 | 100.51 | precipitation | 0.1 | 270 | > th | dose dependent | sin | 4 | NA |
| 217 | 100.61 | humidity | 70.0 | 10 | > th | dose dependent | rect. | 2 | 19 |
| 243 | 100.88 | radiation | 10.0 | 30 | > th | dose independent | rect. | 6 | 5 |
| 257 | 100.89 | humidity | 70.0 | 10 | > th | dose dependent | rect. | 2 | 15 |
| 266 | 100.92 | temperature | 20.0 | 90 | > th | dose dependent | rect. | 4 | 7 |
| 277 | 100.99 | humidity | 50.0 | 30 | > th | dose dependent | rect. | 11 | 19 |
| 284 | 101.02 | radiation | 10.0 | 90 | < th | dose dependent | rect. | 17 | 18 |
| 286 | 101.03 | humidity | 70.0 | 10 | > th | dose dependent | rect. | 24 | 16 |
| 350 | 101.41 | humidity | 70.0 | 10 | > th | dose dependent | rect. | 1 | 23 |
| 360 | 101.48 | humidity | 90.0 | 10 | < th | dose dependent | rect. | 6 | 20 |
| 361 | 101.49 | humidity | 80.0 | 10 | > th | dose independent | rect. | 22 | 23 |
| 364 | 101.50 | radiation | 10.0 | 90 | < th | dose dependent | rect. | 1 | 23 |
| 366 | 101.51 | radiation | 10.0 | 30 | < th | dose dependent | rect. | 2 | 14 |
| 370 | 101.53 | temperature | 25.0 | 10 | > th | dose independent | sin | 5 | NA |
| 376 | 101.56 | humidity | 90.0 | 10 | < th | dose dependent | rect. | 6 | 18 |
| 392 | 101.62 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 5 | 6 |
| 394 | 101.64 | humidity | 80.0 | 30 | > th | dose dependent | rect. | 7 | 9 |
| 403 | 101.66 | humidity | 80.0 | 10 | > th | dose independent | rect. | 2 | 15 |
| 415 | 101.67 | humidity | 60.0 | 10 | > th | dose dependent | rect. | 11 | 21 |
| 432 | 101.73 | temperature | 25.0 | 10 | < th | dose independent | rect. | 2 | 12 |
| 442 | 101.76 | humidity | 90.0 | 10 | < th | dose dependent | rect. | 13 | 23 |
| 445 | 101.79 | radiation | 10.0 | 90 | < th | dose independent | rect. | 7 | 23 |
| 449 | 101.81 | humidity | 50.0 | 90 | > th | dose dependent | rect. | 11 | 8 |
| 463 | 101.88 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 2 | 17 |
| 468 | 101.91 | radiation | 10.0 | 270 | > th | dose independent | rect. | 17 | 14 |
| 484 | 101.96 | radiation | 10.0 | 30 | < th | dose independent | sin | 10 | NA |
| 491 | 102.00 | temperature | 25.0 | 10 | < th | dose independent | rect. | 2 | 8 |
| 503 | 102.04 | radiation | 10.0 | 90 | > th | dose independent | rect. | 12 | 23 |
| 507 | 102.05 | radiation | 1.0 | 270 | > th | dose dependent | rect. | 6 | 1 |
| 510 | 102.06 | temperature | 25.0 | 10 | < th | dose independent | sin | 5 | NA |
| 526 | 102.12 | humidity | 90.0 | 10 | < th | dose dependent | rect. | 6 | 16 |
| 529 | 102.14 | radiation | 1.0 | 90 | > th | dose independent | sin | 3 | NA |
| 534 | 102.17 | radiation | 1.0 | 90 | < th | dose independent | sin | 3 | NA |
| 535 | 102.17 | radiation | 10.0 | 90 | > th | dose independent | rect. | 15 | 23 |
| 538 | 102.17 | radiation | 1.0 | 270 | > th | dose dependent | rect. | 18 | 13 |
| 551 | 102.21 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 20 | 15 |
| 562 | 102.24 | humidity | 90.0 | 10 | < th | dose independent | sin | 1 | NA |
| 578 | 102.28 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 24 | 11 |
| 585 | 102.29 | humidity | 50.0 | 30 | > th | dose dependent | rect. | 11 | 10 |
| 592 | 102.32 | humidity | 80.0 | 10 | > th | dose independent | rect. | 24 | 17 |
| 596 | 102.32 | humidity | 90.0 | 10 | < th | dose dependent | rect. | 23 | 23 |
| 619 | 102.39 | humidity | 80.0 | 10 | > th | dose independent | rect. | 24 | 21 |
| 637 | 102.41 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 2 | 9 |
| 646 | 102.41 | humidity | 80.0 | 10 | > th | dose independent | rect. | 2 | 19 |
| 661 | 102.44 | temperature | 30.0 | 10 | < th | dose dependent | sin | 4 | NA |
| 663 | 102.45 | radiation | 10.0 | 30 | > th | dose independent | rect. | 6 | 3 |
| 681 | 102.46 | humidity | 70.0 | 30 | > th | dose dependent | rect. | 9 | 10 |
| 684 | 102.48 | radiation | 10.0 | 270 | > th | dose independent | rect. | 6 | 1 |
| 698 | 102.49 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 2 | 10 |
| 708 | 102.52 | humidity | 70.0 | 10 | > th | dose dependent | rect. | 22 | 18 |
| 709 | 102.52 | humidity | 90.0 | 10 | < th | dose dependent | rect. | 21 | 23 |
| 713 | 102.54 | temperature | 25.0 | 10 | > th | dose independent | rect. | 21 | 14 |
| 735 | 102.59 | humidity | 90.0 | 10 | < th | dose dependent | no | NA | NA |
| 743 | 102.61 | humidity | 90.0 | 10 | < th | dose dependent | rect. | 1 | 23 |
| 766 | 102.67 | radiation | 10.0 | 90 | > th | dose independent | no | NA | NA |
| 767 | 102.67 | radiation | 10.0 | 90 | > th | dose independent | rect. | 6 | 12 |
| 849 | 102.68 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 20 | 14 |
| 885 | 102.74 | humidity | 90.0 | 10 | < th | dose dependent | rect. | 6 | 14 |
| 916 | 102.79 | humidity | 80.0 | 10 | > th | dose independent | sin | 1 | NA |
| 918 | 102.79 | radiation | 1.0 | 90 | < th | dose independent | rect. | 17 | 23 |
| 922 | 102.80 | humidity | 50.0 | 90 | > th | dose dependent | rect. | 9 | 10 |
| 952 | 102.86 | humidity | 90.0 | 10 | < th | dose dependent | rect. | 15 | 23 |
| 977 | 102.94 | temperature | 10.0 | 10 | > th | dose dependent | sin | 4 | NA |
| 991 | 102.96 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 2 | 9 |