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Os07g0478700

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description :


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 7.76 (0.0456) R2 : 0.622
β1 : -1.18 (0.17) R2dD : 0.0453 R2D : -0.012
β2 : 2.07 (0.115) R2dC : 0.265 R2C : 0.192
β3 : -2.09 (0.19) R2dE : 0.128 R2E : 0.047
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -1.65 (0.0984) R2dN8 : 0.334 R2N8 : 0.141
σ : 0.849
deviance : 332.07
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_____
C
peak time of C : 8.33
E
wheather : precipitation
threshold : 0.4166
memory length : 6917
response mode : > th
dose dependency : dose dependent
G
type of G : rect.
peak or start time of G : 12
open length of G : 4.95

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Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = precipitation, response mode = > th, dose dependency = dose dependent, type of G = rect.)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
319.93 0.84 7.79 -1.32 2.07 -1.58 1.65 -2.68 -1.68 8.42 0.243 7124 11.9 5.03
327.85 0.843 7.78 -1.26 2 -1.82 1.59 -- -1.59 8.35 0.4132 6919 11.9 4.95
328.58 0.844 7.78 -1.32 2.07 -1.57 -- -2.76 -1.67 8.41 0.2177 7123 11.9 5.02
332.07 0.849 7.76 -1.18 2.07 -2.09 -- -- -1.65 8.33 0.4166 6917 12 4.95
558.18 1.1 7.84 -1.23 -- -1.86 -- -2.14 -1.65 -- 0.3336 6730 11.8 5.11
426.52 0.968 7.72 -1.68 2.07 -- 1.71 -- -1.5 8.37 -- -- -- --
435.72 0.978 7.72 -1.63 2.07 -- -- -- -1.5 8.39 -- -- -- --
421.52 0.956 7.77 -1.22 -- -2.07 -- -- -1.18 -- -0.3988 12241 12.4 5.2
355.63 0.878 7.72 -- 2.07 -2.35 -- -- -1.59 8.61 0.6032 19971 12.1 4.86
674.28 1.21 7.78 -1.62 -- -- -- -- -1.47 -- -- -- -- --
505.7 1.05 7.68 -- 2.06 -- -- -- -1.31 8.45 -- -- -- --
430.92 0.967 7.74 -- -- -3.13 -- -- -1.14 -- -0.2732 12235 13 4.63
743.33 1.27 7.74 -- -- -- -- -- -1.3 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 331.07 humidity 80.0 1440 < th dose independent rect. 11 1
2 332.42 precipitation 0.1 14400 > th dose independent rect. 17 1
3 333.16 humidity 80.0 1440 > th dose independent rect. 11 1
4 333.70 precipitation 0.1 4320 > th dose dependent rect. 12 5
7 334.29 precipitation 0.1 14400 < th dose independent rect. 17 1
8 334.29 precipitation 0.1 14400 < th dose dependent rect. 17 1
10 334.76 precipitation 0.1 4320 > th dose dependent rect. 4 13
22 336.44 precipitation 0.1 14400 > th dose independent rect. 13 4
24 336.47 precipitation 0.1 14400 < th dose independent rect. 13 4
25 336.47 precipitation 0.1 14400 < th dose dependent rect. 13 4
31 337.21 precipitation 0.1 4320 > th dose dependent rect. 18 23
39 337.75 precipitation 0.1 4320 > th dose dependent rect. 1 16
45 338.47 precipitation 0.1 4320 > th dose independent rect. 3 14
47 338.58 precipitation 0.1 4320 < th dose independent rect. 3 14
48 338.58 precipitation 0.1 4320 < th dose dependent rect. 3 14
50 338.71 precipitation 0.1 14400 < th dose independent rect. 9 8
51 338.71 precipitation 0.1 14400 < th dose dependent rect. 9 8
53 338.72 precipitation 0.1 14400 < th dose independent rect. 13 7
54 338.72 precipitation 0.1 14400 < th dose dependent rect. 13 7
57 338.80 precipitation 0.1 14400 > th dose independent rect. 13 7
64 339.15 wind 3.0 43200 < th dose dependent rect. 1 5
66 339.27 precipitation 0.1 4320 > th dose dependent rect. 4 10
67 339.31 precipitation 0.1 14400 > th dose dependent rect. 17 1
75 339.64 precipitation 0.1 14400 > th dose independent rect. 9 11
76 339.70 precipitation 0.1 14400 < th dose independent rect. 9 11
77 339.70 precipitation 0.1 14400 < th dose dependent rect. 9 11
91 340.26 wind 1.0 14400 < th dose independent rect. 4 2
93 340.35 wind 1.0 14400 > th dose independent rect. 4 2
95 340.40 precipitation 0.1 14400 > th dose independent rect. 5 15
96 340.40 precipitation 0.1 14400 < th dose independent rect. 5 15
97 340.40 precipitation 0.1 14400 < th dose dependent rect. 5 15
148 342.13 wind 1.0 4320 > th dose independent rect. 17 2
162 342.38 precipitation 0.1 14400 > th dose independent sin 0 NA
163 342.43 precipitation 0.1 14400 < th dose independent sin 0 NA
164 342.43 precipitation 0.1 14400 < th dose dependent sin 0 NA
174 342.56 precipitation 0.1 4320 > th dose dependent rect. 18 12
183 342.94 humidity 60.0 14400 > th dose independent rect. 12 1
185 343.02 precipitation 0.1 4320 > th dose independent rect. 1 16
201 343.21 humidity 60.0 14400 < th dose independent rect. 12 1
211 343.42 humidity 50.0 14400 > th dose dependent rect. 16 1
213 343.48 wind 1.0 43200 > th dose independent rect. 1 1
218 343.58 precipitation 0.1 4320 > th dose independent sin 2 NA
220 343.62 humidity 50.0 14400 > th dose dependent rect. 14 3
221 343.64 precipitation 0.1 4320 < th dose independent sin 2 NA
223 343.64 precipitation 0.1 4320 < th dose dependent sin 2 NA
244 343.79 wind 3.0 43200 > th dose independent rect. 7 1
246 343.86 wind 3.0 43200 < th dose independent rect. 7 1
248 343.87 humidity 90.0 14400 < th dose dependent rect. 16 1
269 344.18 precipitation 0.1 14400 > th dose dependent sin 2 NA
277 344.25 humidity 90.0 14400 < th dose dependent rect. 14 3
285 344.40 humidity 70.0 14400 > th dose independent rect. 17 3
294 344.50 precipitation 0.1 14400 > th dose dependent rect. 3 17
296 344.52 precipitation 0.1 4320 > th dose independent rect. 24 20
301 344.55 wind 1.0 4320 < th dose independent rect. 18 1
302 344.55 precipitation 0.1 4320 < th dose independent rect. 1 19
304 344.55 precipitation 0.1 4320 < th dose dependent rect. 1 19
341 344.86 wind 3.0 14400 < th dose independent rect. 24 1
344 344.90 wind 3.0 43200 > th dose independent rect. 5 4
350 344.95 humidity 70.0 14400 > th dose independent rect. 17 15
358 345.02 humidity 80.0 14400 > th dose independent rect. 13 5
367 345.07 wind 3.0 43200 < th dose independent rect. 5 4
374 345.09 humidity 70.0 14400 > th dose independent rect. 17 13
381 345.12 humidity 70.0 14400 > th dose independent rect. 17 9
400 345.24 precipitation 0.1 4320 < th dose independent rect. 4 10
402 345.24 precipitation 0.1 4320 < th dose dependent rect. 4 10
408 345.29 precipitation 0.1 4320 > th dose independent rect. 4 10
456 345.60 wind 1.0 43200 > th dose dependent rect. 5 3
513 345.95 wind 1.0 43200 > th dose dependent rect. 5 1
522 346.02 humidity 70.0 1440 > th dose dependent rect. 11 1
534 346.10 precipitation 0.1 4320 > th dose independent rect. 18 23
543 346.16 humidity 90.0 4320 > th dose independent rect. 13 1
544 346.16 precipitation 0.1 4320 < th dose independent rect. 18 23
545 346.16 precipitation 0.1 4320 < th dose dependent rect. 18 23
573 346.31 wind 9.0 43200 < th dose dependent rect. 5 1
576 346.33 wind 9.0 43200 < th dose dependent rect. 5 3
591 346.42 precipitation 0.1 14400 > th dose dependent rect. 9 11
596 346.46 precipitation 0.1 1440 > th dose dependent rect. 5 3
614 346.54 precipitation 0.1 14400 > th dose dependent rect. 11 9
636 346.69 precipitation 0.1 1440 < th dose independent rect. 5 3
638 346.69 precipitation 0.1 1440 < th dose dependent rect. 5 3
642 346.72 humidity 70.0 14400 < th dose dependent rect. 16 1
647 346.74 precipitation 0.1 14400 > th dose dependent rect. 7 13
695 347.07 wind 1.0 43200 < th dose independent rect. 24 4
705 347.13 wind 3.0 14400 < th dose dependent rect. 4 1
713 347.18 humidity 70.0 14400 < th dose independent rect. 16 3
781 347.54 humidity 70.0 14400 < th dose independent rect. 16 16
784 347.56 humidity 70.0 14400 > th dose independent sin 12 NA
791 347.60 wind 1.0 43200 > th dose dependent rect. 7 1
834 347.76 humidity 80.0 14400 < th dose dependent sin 18 NA
835 347.77 precipitation 0.1 1440 > th dose independent rect. 5 3
875 348.02 humidity 70.0 14400 < th dose independent rect. 15 18
894 348.10 humidity 70.0 14400 < th dose independent sin 12 NA
911 348.17 humidity 70.0 14400 > th dose independent rect. 16 21
935 348.26 humidity 80.0 14400 < th dose independent rect. 13 5
940 348.28 humidity 60.0 14400 > th dose independent rect. 12 8
950 348.31 humidity 60.0 14400 > th dose independent rect. 12 16