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Os07g0469100

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Thylakoid membrane phosphoprotein 14 kDa, chloroplast precursor.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 13.4 (0.0267) R2 : 0.694
β1 : -2.58 (0.0976) R2dD : 0.484 R2D : 0.3
β2 : 0.867 (0.0676) R2dC : 0.111 R2C : 0.0366
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -1.04 (0.0569) R2dN8 : 0.301 R2N8 : 0.1
σ : 0.501
deviance : 114.65
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_____
C
peak time of C : 8.14
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = atmosphere, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
100 0.47 13.4 -2.84 0.871 -1.03 0.591 1.84 -0.995 7.96 1000 51 -- --
99.43 0.464 13.4 -2.71 0.87 -0.707 0.634 -- -0.986 7.91 1000 31 -- --
100.61 0.467 13.4 -2.83 0.871 -1.05 -- 1.97 -0.994 8 1000 35 -- --
100.57 0.467 13.4 -2.69 0.869 -0.708 -- -- -0.99 8.02 1000 33 -- --
141.9 0.555 13.4 -2.82 -- -1.04 -- 1.83 -0.964 -- 1000 41 -- --
113.7 0.5 13.4 -2.59 0.869 -- 0.573 -- -1.04 8.04 -- -- -- --
114.65 0.501 13.4 -2.58 0.867 -- -- -- -1.04 8.14 -- -- -- --
141.74 0.555 13.4 -2.68 -- -0.702 -- -- -0.978 -- 1000 24 -- --
283.37 0.784 13.3 -- 0.893 -0.41 -- -- -0.676 8.14 1003 300 -- --
155.96 0.584 13.4 -2.57 -- -- -- -- -1.03 -- -- -- -- --
289.46 0.796 13.3 -- 0.854 -- -- -- -0.755 8.36 -- -- -- --
324.94 0.84 13.3 -- -- -0.342 -- -- -0.689 -- 1003 267 -- --
329.95 0.848 13.3 -- -- -- -- -- -0.747 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 93.98 atmosphere 1000.0 270 > th dose independent rect. 10 17
8 95.70 humidity 80.0 14400 < th dose dependent rect. 19 10
10 95.75 atmosphere 1000.0 90 > th dose independent rect. 19 23
14 96.00 humidity 80.0 14400 > th dose independent rect. 19 11
18 96.26 atmosphere 1000.0 10 > th dose independent rect. 9 23
26 96.76 wind 1.0 43200 > th dose independent rect. 10 1
28 96.79 wind 1.0 43200 < th dose dependent rect. 2 6
31 96.84 wind 9.0 14400 > th dose dependent rect. 13 1
32 96.85 humidity 80.0 14400 < th dose independent rect. 19 11
43 97.09 wind 1.0 43200 < th dose independent rect. 2 6
85 97.77 wind 1.0 43200 > th dose independent rect. 2 6
86 97.78 radiation 40.0 14400 > th dose dependent rect. 12 1
89 97.85 wind 1.0 43200 < th dose independent rect. 10 1
107 98.08 humidity 80.0 14400 > th dose independent sin 11 NA
116 98.13 humidity 80.0 14400 < th dose dependent rect. 20 1
122 98.24 humidity 80.0 14400 < th dose independent sin 11 NA
142 98.40 atmosphere 1000.0 10 > th dose independent rect. 12 16
146 98.43 atmosphere 1000.0 10 > th dose independent rect. 12 18
162 98.66 precipitation 0.1 43200 > th dose dependent rect. 18 2
170 98.77 radiation 40.0 14400 < th dose independent rect. 12 1
174 98.80 radiation 40.0 14400 > th dose independent rect. 12 1
213 99.14 radiation 40.0 14400 > th dose independent rect. 10 1
217 99.16 radiation 40.0 14400 < th dose independent rect. 10 4
223 99.24 radiation 40.0 14400 > th dose independent rect. 10 4
226 99.27 atmosphere 995.0 270 > th dose dependent rect. 11 16
228 99.29 wind 9.0 14400 > th dose independent rect. 13 1
234 99.33 radiation 40.0 14400 < th dose independent rect. 10 1
242 99.39 wind 1.0 43200 < th dose independent rect. 3 2
252 99.45 radiation 40.0 14400 < th dose dependent rect. 13 1
273 99.62 radiation 10.0 14400 < th dose independent rect. 13 1
281 99.66 wind 1.0 43200 < th dose dependent rect. 13 11
288 99.68 atmosphere 1000.0 270 > th dose independent rect. 20 8
302 99.80 radiation 20.0 14400 < th dose dependent rect. 13 1
330 99.83 radiation 40.0 14400 < th dose independent rect. 10 7
334 99.83 radiation 40.0 14400 < th dose independent rect. 10 19
354 99.88 precipitation 0.1 43200 < th dose independent rect. 18 2
355 99.88 precipitation 0.1 43200 < th dose dependent rect. 18 2
359 99.90 wind 1.0 43200 < th dose dependent rect. 10 1
369 99.94 wind 1.0 43200 > th dose independent rect. 3 2
370 99.94 atmosphere 1000.0 10 > th dose independent rect. 1 23
371 99.94 atmosphere 1000.0 10 > th dose independent rect. 3 23
372 99.94 atmosphere 1000.0 10 > th dose independent rect. 11 23
373 99.95 precipitation 0.1 43200 > th dose independent rect. 18 2
374 99.95 precipitation 0.1 43200 < th dose independent rect. 16 4
376 99.95 precipitation 0.1 43200 < th dose dependent rect. 16 4
377 99.96 precipitation 0.1 43200 > th dose independent rect. 16 4
385 99.99 atmosphere 1000.0 10 < th dose independent rect. 11 23
407 100.01 atmosphere 1000.0 10 < th dose independent rect. 5 23
408 100.01 atmosphere 1000.0 10 < th dose independent rect. 15 23
411 100.03 radiation 40.0 14400 < th dose independent rect. 12 7
413 100.03 radiation 40.0 14400 < th dose independent rect. 12 19
424 100.04 radiation 40.0 14400 < th dose independent rect. 12 12
426 100.04 radiation 40.0 14400 < th dose independent rect. 12 15
433 100.04 atmosphere 1000.0 10 < th dose independent rect. 13 23
437 100.05 atmosphere 1000.0 10 > th dose independent no NA NA
439 100.05 atmosphere 1000.0 10 < th dose independent no NA NA
444 100.05 atmosphere 1000.0 10 < th dose independent rect. 17 23
446 100.05 atmosphere 1000.0 10 < th dose independent rect. 19 23
453 100.06 atmosphere 1000.0 10 < th dose independent rect. 3 23
455 100.06 atmosphere 1000.0 30 < th dose independent rect. 23 23
459 100.07 atmosphere 1000.0 30 < th dose independent rect. 7 23
460 100.07 atmosphere 1000.0 30 < th dose independent rect. 9 23
479 100.08 atmosphere 1000.0 30 < th dose independent rect. 21 23
485 100.09 humidity 80.0 14400 < th dose dependent sin 11 NA
489 100.10 atmosphere 1000.0 30 < th dose independent rect. 1 23
507 100.14 atmosphere 1000.0 720 > th dose independent rect. 3 19
515 100.16 wind 1.0 43200 > th dose independent rect. 16 9
516 100.16 atmosphere 1000.0 270 > th dose independent rect. 24 23
523 100.19 temperature 30.0 1440 < th dose independent rect. 10 1
544 100.22 radiation 40.0 14400 < th dose independent rect. 6 8
563 100.22 radiation 40.0 14400 < th dose independent rect. 18 20
628 100.33 wind 1.0 43200 < th dose independent rect. 16 9
636 100.34 humidity 80.0 14400 < th dose dependent rect. 3 1
718 100.38 wind 9.0 14400 < th dose independent rect. 13 1
751 100.41 atmosphere 1000.0 30 > th dose independent rect. 13 23
754 100.42 radiation 40.0 14400 < th dose independent sin 19 NA
764 100.44 temperature 30.0 1440 > th dose independent rect. 10 1
798 100.50 atmosphere 1000.0 90 > th dose independent rect. 9 9
801 100.51 atmosphere 1000.0 720 > th dose independent sin 19 NA
832 100.54 precipitation 0.1 43200 > th dose dependent rect. 11 9
882 100.61 wind 5.0 43200 < th dose independent rect. 8 1
887 100.61 humidity 80.0 14400 < th dose dependent rect. 1 1
922 100.64 radiation 40.0 14400 < th dose independent rect. 6 12
981 100.64 radiation 40.0 14400 < th dose independent rect. 6 23
987 100.65 radiation 40.0 14400 < th dose independent no NA NA
988 100.65 wind 5.0 43200 > th dose independent rect. 8 1