Os07g0466200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os07g0466200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 56.44 | 0.353 | 9.7 | -0.231 | 0.544 | 1.32 | 0.237 | -1.21 | -0.106 | 7.39 | 31.25 | 227 | -- | -- |
| 58.07 | 0.355 | 9.71 | -0.356 | 0.521 | 1.38 | 0.246 | -- | -0.122 | 7.79 | 30.72 | 234 | -- | -- |
| 56.5 | 0.35 | 9.7 | -0.229 | 0.56 | 1.35 | -- | -1.23 | -0.117 | 7.49 | 31.88 | 200 | -- | -- |
| 57.84 | 0.354 | 9.72 | -0.405 | 0.54 | 1.3 | -- | -- | -0.122 | 7.43 | 30.25 | 226 | -- | -- |
| 67.95 | 0.384 | 9.71 | -0.132 | -- | 1.85 | -- | -1.36 | -0.0675 | -- | 36.38 | 328 | -- | -- |
| 79.41 | 0.418 | 9.77 | -0.745 | 0.865 | -- | 0.0941 | -- | -0.393 | 6.05 | -- | -- | -- | -- |
| 79.43 | 0.417 | 9.77 | -0.745 | 0.865 | -- | -- | -- | -0.394 | 6.04 | -- | -- | -- | -- |
| 68.92 | 0.387 | 9.73 | -0.281 | -- | 1.8 | -- | -- | -0.0937 | -- | 32.41 | 338 | -- | -- |
| 62 | 0.367 | 9.7 | -- | 0.513 | 1.47 | -- | -- | -0.0613 | 7.83 | 30.01 | 222 | -- | -- |
| 118.24 | 0.508 | 9.79 | -0.72 | -- | -- | -- | -- | -0.374 | -- | -- | -- | -- | -- |
| 94.04 | 0.454 | 9.76 | -- | 0.854 | -- | -- | -- | -0.311 | 6.08 | -- | -- | -- | -- |
| 71.41 | 0.394 | 9.71 | -- | -- | 1.83 | -- | -- | -0.0323 | -- | 31.36 | 346 | -- | -- |
| 131.9 | 0.536 | 9.77 | -- | -- | -- | -- | -- | -0.294 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 54.22 | temperature | 15 | 270 | > th | dose dependent | rect. | 6 | 21 |
| 5 | 54.34 | temperature | 30 | 30 | < th | dose dependent | rect. | 3 | 23 |
| 18 | 56.15 | temperature | 15 | 270 | > th | dose dependent | rect. | 19 | 23 |
| 20 | 56.23 | temperature | 30 | 270 | < th | dose dependent | rect. | 24 | 23 |
| 26 | 56.68 | temperature | 30 | 270 | < th | dose dependent | rect. | 14 | 23 |
| 35 | 56.94 | temperature | 30 | 270 | < th | dose dependent | no | NA | NA |
| 41 | 57.02 | temperature | 15 | 270 | > th | dose dependent | no | NA | NA |
| 47 | 57.16 | temperature | 15 | 270 | > th | dose dependent | rect. | 15 | 23 |
| 200 | 58.80 | temperature | 20 | 90 | > th | dose dependent | rect. | 1 | 23 |
| 220 | 58.97 | temperature | 15 | 270 | > th | dose dependent | rect. | 22 | 13 |
| 234 | 59.09 | temperature | 10 | 270 | > th | dose dependent | sin | 7 | NA |
| 256 | 59.23 | temperature | 10 | 720 | > th | dose dependent | rect. | 15 | 20 |
| 298 | 59.47 | temperature | 15 | 10 | > th | dose dependent | rect. | 22 | 23 |
| 360 | 59.84 | temperature | 30 | 270 | < th | dose dependent | sin | 8 | NA |
| 374 | 59.91 | temperature | 25 | 1440 | < th | dose dependent | rect. | 22 | 14 |
| 386 | 59.96 | temperature | 25 | 1440 | < th | dose dependent | rect. | 1 | 11 |
| 447 | 60.19 | temperature | 25 | 1440 | < th | dose dependent | sin | 7 | NA |
| 666 | 60.68 | temperature | 10 | 1440 | > th | dose dependent | rect. | 4 | 1 |
| 668 | 60.68 | temperature | 10 | 1440 | > th | dose dependent | rect. | 22 | 8 |
| 692 | 60.71 | temperature | 25 | 1440 | < th | dose dependent | rect. | 4 | 1 |
| 703 | 60.72 | temperature | 25 | 1440 | < th | dose dependent | rect. | 22 | 1 |
| 732 | 60.76 | temperature | 10 | 1440 | > th | dose dependent | rect. | 1 | 4 |