Os07g0446600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Hypothetical protein.
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Os07g0446600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 111.44 | 0.496 | 7.14 | -0.742 | 0.872 | 2.11 | -1.1 | 3.21 | 0.183 | 5.29 | 28.22 | 57 | -- | -- |
| 124.72 | 0.52 | 7.08 | -0.221 | 0.898 | 2.03 | -0.443 | -- | 0.301 | 5.45 | 29.17 | 41 | -- | -- |
| 114.25 | 0.498 | 7.13 | -0.7 | 0.863 | 2.08 | -- | 2.96 | 0.191 | 5.29 | 27.93 | 56 | -- | -- |
| 124.95 | 0.521 | 7.07 | -0.21 | 0.881 | 2.02 | -- | -- | 0.308 | 5.33 | 29.03 | 52 | -- | -- |
| 144.74 | 0.56 | 7.12 | -0.538 | -- | 2.65 | -- | 2.97 | 0.305 | -- | 29.45 | 80 | -- | -- |
| 180.81 | 0.63 | 7.17 | -0.707 | 1.44 | -- | 0.304 | -- | -0.107 | 4.12 | -- | -- | -- | -- |
| 181.07 | 0.63 | 7.17 | -0.71 | 1.44 | -- | -- | -- | -0.109 | 4.15 | -- | -- | -- | -- |
| 156.09 | 0.582 | 7.07 | -0.0314 | -- | 2.69 | -- | -- | 0.413 | -- | 30.33 | 103 | -- | -- |
| 125.99 | 0.523 | 7.06 | -- | 0.855 | 2.11 | -- | -- | 0.349 | 5.43 | 29.02 | 52 | -- | -- |
| 293.58 | 0.801 | 7.18 | -0.652 | -- | -- | -- | -- | -0.0704 | -- | -- | -- | -- | -- |
| 194.35 | 0.652 | 7.15 | -- | 1.43 | -- | -- | -- | -0.0297 | 4.16 | -- | -- | -- | -- |
| 156.12 | 0.582 | 7.06 | -- | -- | 2.69 | -- | -- | 0.423 | -- | 30.21 | 82 | -- | -- |
| 304.78 | 0.815 | 7.16 | -- | -- | -- | -- | -- | 0.00188 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 106.07 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 12 | 23 |
| 4 | 108.16 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 13 | 20 |
| 6 | 109.04 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 12 | 22 |
| 13 | 109.83 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 15 | 18 |
| 15 | 109.94 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 1 | 23 |
| 16 | 110.08 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 15 | 20 |
| 41 | 113.13 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 17 | 23 |
| 47 | 113.23 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 3 | 23 |
| 54 | 113.58 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 15 | 23 |
| 55 | 113.62 | temperature | 30.0 | 30 | < th | dose dependent | no | NA | NA |
| 59 | 113.71 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 9 | 23 |
| 66 | 113.93 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 23 | 23 |
| 79 | 114.38 | temperature | 15.0 | 90 | > th | dose dependent | rect. | 6 | 23 |
| 107 | 115.70 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 21 | 23 |
| 109 | 115.91 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 19 | 23 |
| 113 | 116.08 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 5 | 23 |
| 130 | 117.29 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 17 | 21 |
| 178 | 119.80 | temperature | 10.0 | 30 | > th | dose dependent | no | NA | NA |
| 202 | 120.87 | temperature | 15.0 | 10 | > th | dose dependent | rect. | 23 | 23 |
| 213 | 121.39 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 7 | 23 |
| 230 | 121.70 | temperature | 25.0 | 90 | < th | dose dependent | rect. | 3 | 20 |
| 337 | 124.17 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 21 | 23 |
| 353 | 124.53 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 16 | 23 |
| 381 | 124.91 | temperature | 20.0 | 90 | > th | dose dependent | rect. | 13 | 23 |
| 431 | 126.19 | temperature | 20.0 | 90 | > th | dose dependent | rect. | 18 | 23 |
| 440 | 126.39 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 3 | 23 |
| 453 | 126.63 | temperature | 30.0 | 270 | < th | dose dependent | sin | 10 | NA |
| 459 | 126.71 | temperature | 15.0 | 90 | > th | dose dependent | sin | 8 | NA |
| 468 | 126.84 | temperature | 30.0 | 90 | < th | dose dependent | sin | 8 | NA |
| 484 | 127.21 | temperature | 10.0 | 270 | > th | dose dependent | sin | 10 | NA |
| 527 | 127.88 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 15 | 23 |
| 574 | 128.50 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 17 | 23 |
| 676 | 130.04 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 11 | 23 |
| 800 | 131.62 | temperature | 30.0 | 720 | < th | dose dependent | rect. | 9 | 14 |
| 803 | 131.63 | temperature | 30.0 | 720 | < th | dose dependent | sin | 18 | NA |
| 964 | 133.13 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 13 | 5 |
| 988 | 133.38 | temperature | 25.0 | 10 | < th | dose dependent | sin | 22 | NA |
| 994 | 133.42 | temperature | 25.0 | 270 | < th | dose independent | rect. | 11 | 21 |