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Os07g0418200

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 12.1 (0.0132) R2 : 0.888
β1 : -0.876 (0.0485) R2dD : 0.0834 R2D : 0.063
β2 : 1.99 (0.0345) R2dC : 0.822 R2C : 0.802
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.178 (0.0283) R2dN8 : 0.0131 R2N8 : -0.00844
σ : 0.249
deviance : 28.27
__
_____
C
peak time of C : 5.57
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = wind, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
25.39 0.235 12.1 -0.949 1.88 -0.32 0.0387 0.0148 -0.181 5.68 5 10 -- --
25.39 0.235 12.1 -0.949 1.88 -0.32 0.0387 -- -0.181 5.68 5 10 -- --
25.39 0.235 12.1 -0.949 1.88 -0.319 -- 0.00204 -0.181 5.68 5.004 10 -- --
25.39 0.235 12.1 -0.949 1.88 -0.319 -- -- -0.181 5.68 5.005 10 -- --
117.09 0.504 12.1 -1.22 -- -1.28 -- 0.509 -0.135 -- 2.7 212 -- --
28.18 0.249 12.1 -0.876 1.99 -- -0.186 -- -0.179 5.57 -- -- -- --
28.27 0.249 12.1 -0.876 1.99 -- -- -- -0.178 5.57 -- -- -- --
115.97 0.502 12.1 -1.29 -- -1.37 -- -- -0.132 -- 3 201 -- --
48.12 0.325 12.1 -- 1.95 -0.0872 -- -- -0.0799 5.62 5.005 10 -- --
234.59 0.716 12.1 -0.812 -- -- -- -- -0.13 -- -- -- -- --
48.51 0.326 12.1 -- 1.98 -- -- -- -0.0808 5.59 -- -- -- --
157.46 0.584 12.1 -- -- -1.18 -- -- -0.0091 -- 3.142 181 -- --
251.96 0.741 12.1 -- -- -- -- -- -0.0402 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 21.73 temperature 10.0 270 > th dose independent rect. 1 11
2 21.73 atmosphere 995.0 270 > th dose independent rect. 1 11
3 21.73 atmosphere 1015.0 270 < th dose independent rect. 1 11
4 21.73 temperature 10.0 270 > th dose independent rect. 12 13
5 21.74 precipitation 0.1 270 < th dose independent rect. 1 11
6 21.74 precipitation 0.1 270 < th dose dependent rect. 1 11
7 21.82 wind 1.0 270 > th dose independent rect. 12 13
8 21.85 radiation 30.0 270 < th dose independent rect. 21 11
9 21.85 precipitation 0.1 270 < th dose independent rect. 12 13
10 21.85 precipitation 0.1 270 < th dose dependent rect. 12 13
11 21.86 wind 9.0 270 < th dose independent rect. 1 11
12 21.91 humidity 70.0 270 > th dose independent rect. 21 11
13 21.93 humidity 50.0 270 > th dose independent rect. 1 11
15 22.00 temperature 10.0 270 > th dose independent rect. 21 11
16 22.00 temperature 30.0 270 < th dose independent rect. 21 11
17 22.00 humidity 50.0 270 > th dose independent rect. 21 11
19 22.00 atmosphere 995.0 270 > th dose independent rect. 21 11
20 22.00 temperature 10.0 270 > th dose independent rect. 8 13
21 22.05 wind 9.0 270 < th dose independent rect. 21 11
22 22.05 atmosphere 1015.0 270 < th dose independent rect. 8 13
23 22.11 wind 9.0 270 < th dose independent rect. 8 13
24 22.13 precipitation 0.1 270 < th dose independent rect. 21 11
25 22.13 precipitation 0.1 270 < th dose dependent rect. 21 11
26 22.22 wind 9.0 270 < th dose independent rect. 12 13
27 22.28 wind 7.0 720 < th dose independent rect. 17 3
29 22.38 wind 1.0 720 > th dose independent rect. 12 5
30 22.38 wind 7.0 720 < th dose independent rect. 17 12
31 22.44 radiation 40.0 270 < th dose dependent rect. 21 11
34 22.50 wind 5.0 10 < th dose independent rect. 9 14
36 22.52 wind 5.0 10 > th dose independent rect. 14 19
38 22.54 wind 5.0 10 > th dose independent rect. 14 3
39 22.54 wind 5.0 90 > th dose independent rect. 14 3
41 22.55 wind 7.0 720 < th dose independent rect. 24 5
44 22.55 wind 9.0 720 < th dose independent rect. 17 19
45 22.62 wind 5.0 10 < th dose independent rect. 11 12
47 22.64 wind 1.0 270 > th dose dependent rect. 13 2
48 22.65 precipitation 0.1 270 < th dose independent rect. 8 13
49 22.65 precipitation 0.1 270 < th dose dependent rect. 8 13
51 22.66 wind 9.0 720 < th dose independent rect. 15 14
52 22.67 wind 3.0 270 > th dose independent rect. 12 3
53 22.70 wind 5.0 90 < th dose independent rect. 18 5
61 22.76 radiation 30.0 720 < th dose independent rect. 5 3
64 22.81 humidity 60.0 90 > th dose independent rect. 14 3
75 22.86 radiation 1.0 720 < th dose dependent rect. 24 5
80 22.89 temperature 10.0 720 > th dose independent rect. 12 5
81 22.89 atmosphere 1015.0 720 < th dose independent rect. 12 5
82 22.89 humidity 60.0 90 > th dose independent rect. 23 10
83 22.89 wind 5.0 10 > th dose independent rect. 14 16
85 22.89 temperature 10.0 720 > th dose independent rect. 17 19
88 22.90 humidity 70.0 720 > th dose independent rect. 5 3
89 22.90 radiation 40.0 90 < th dose independent rect. 23 10
92 22.91 temperature 10.0 90 > th dose independent rect. 23 10
94 22.91 atmosphere 995.0 90 > th dose independent rect. 23 10
96 22.91 precipitation 0.1 720 < th dose independent rect. 5 12
98 22.91 precipitation 0.1 720 < th dose dependent rect. 5 12
100 22.92 precipitation 0.1 720 < th dose independent rect. 12 5
101 22.92 wind 9.0 90 < th dose independent rect. 23 10
103 22.92 precipitation 0.1 720 < th dose dependent rect. 12 5
109 22.95 temperature 10.0 720 > th dose independent rect. 24 5
110 22.95 temperature 30.0 720 < th dose independent rect. 24 5
111 22.95 humidity 50.0 720 > th dose independent rect. 24 5
114 22.95 atmosphere 995.0 720 > th dose independent rect. 24 5
115 22.95 radiation 20.0 720 < th dose independent rect. 24 5
119 22.95 temperature 10.0 720 > th dose independent rect. 5 19
120 22.95 wind 9.0 720 < th dose independent rect. 8 21
121 22.95 radiation 20.0 720 < th dose dependent rect. 24 5
126 22.96 wind 5.0 10 > th dose independent rect. 14 6
128 22.97 radiation 1.0 720 < th dose independent rect. 24 5
134 22.99 temperature 20.0 270 > th dose independent rect. 13 2
137 22.99 wind 1.0 10 > th dose dependent rect. 14 4
139 23.00 radiation 20.0 720 < th dose independent rect. 17 12
143 23.01 temperature 10.0 720 > th dose independent rect. 5 12
144 23.01 temperature 10.0 720 > th dose independent rect. 17 12
145 23.01 atmosphere 1015.0 720 < th dose independent rect. 5 12
151 23.02 precipitation 0.1 720 < th dose independent rect. 5 3
153 23.02 precipitation 0.1 720 < th dose independent rect. 5 10
154 23.02 precipitation 0.1 720 < th dose dependent rect. 5 3
155 23.02 precipitation 0.1 720 < th dose dependent rect. 5 10
158 23.04 precipitation 0.1 90 < th dose independent rect. 23 10
160 23.04 precipitation 0.1 90 < th dose dependent rect. 23 10
171 23.07 temperature 30.0 90 < th dose independent rect. 23 10
175 23.08 wind 5.0 10 > th dose independent rect. 14 14
178 23.08 wind 9.0 90 < th dose dependent rect. 17 6
190 23.10 wind 9.0 30 < th dose dependent rect. 9 14
195 23.13 wind 5.0 10 > th dose independent rect. 14 12
202 23.14 wind 9.0 720 < th dose independent rect. 5 3
203 23.14 temperature 10.0 720 > th dose independent rect. 5 3
204 23.14 temperature 30.0 720 < th dose independent rect. 5 3
205 23.14 humidity 50.0 720 > th dose independent rect. 5 3
207 23.14 atmosphere 995.0 720 > th dose independent rect. 5 3
208 23.14 atmosphere 1015.0 720 < th dose independent rect. 5 3
211 23.14 temperature 10.0 720 > th dose independent rect. 17 10
212 23.14 radiation 30.0 720 < th dose independent rect. 17 10
214 23.14 temperature 10.0 720 > th dose independent rect. 3 14
215 23.14 temperature 10.0 720 > th dose independent rect. 8 21
222 23.16 temperature 10.0 720 > th dose independent rect. 17 3
223 23.16 atmosphere 1015.0 720 < th dose independent rect. 17 3
224 23.16 radiation 30.0 720 < th dose independent rect. 17 3
229 23.16 temperature 10.0 720 > th dose independent rect. 20 21
260 23.21 temperature 20.0 270 > th dose independent rect. 12 4
263 23.21 atmosphere 1015.0 720 < th dose independent rect. 3 14
280 23.23 radiation 40.0 720 < th dose dependent rect. 17 12
281 23.24 wind 9.0 270 < th dose independent rect. 13 2
292 23.24 temperature 10.0 720 > th dose independent rect. 5 10
293 23.24 atmosphere 1015.0 720 < th dose independent rect. 5 10
294 23.24 temperature 10.0 720 > th dose independent rect. 15 14
298 23.25 atmosphere 995.0 270 > th dose independent rect. 13 2
300 23.25 precipitation 0.1 720 < th dose independent rect. 20 21
301 23.25 wind 9.0 270 < th dose independent rect. 15 22
302 23.25 wind 9.0 720 < th dose dependent rect. 17 3
306 23.25 wind 3.0 10 > th dose dependent rect. 14 19
307 23.25 precipitation 0.1 720 < th dose dependent rect. 20 21
313 23.27 temperature 10.0 270 > th dose independent rect. 13 2
315 23.27 atmosphere 1010.0 270 < th dose independent rect. 13 2
317 23.27 precipitation 0.1 270 < th dose independent rect. 13 2
324 23.27 temperature 10.0 270 > th dose independent rect. 15 22
325 23.27 precipitation 0.1 270 < th dose dependent rect. 13 2
364 23.32 humidity 50.0 720 > th dose independent rect. 17 19
380 23.36 radiation 40.0 720 < th dose dependent rect. 17 10
381 23.37 humidity 50.0 720 > th dose independent rect. 17 12
383 23.37 wind 9.0 720 < th dose independent rect. 24 14
386 23.37 temperature 10.0 90 > th dose dependent rect. 18 5
388 23.38 wind 1.0 720 > th dose independent rect. 17 3
389 23.38 radiation 40.0 10 < th dose independent rect. 23 10
401 23.40 radiation 40.0 720 < th dose dependent rect. 17 3
402 23.41 temperature 10.0 720 > th dose independent rect. 14 10
405 23.41 temperature 10.0 720 > th dose independent rect. 24 14
406 23.41 atmosphere 995.0 720 > th dose independent rect. 24 14
408 23.41 temperature 10.0 270 > th dose dependent rect. 13 2
411 23.42 atmosphere 995.0 270 > th dose independent rect. 12 13
416 23.43 humidity 90.0 270 < th dose independent rect. 13 2
419 23.43 precipitation 0.1 90 < th dose independent rect. 3 10
424 23.43 precipitation 0.1 90 < th dose dependent rect. 3 10
433 23.44 radiation 10.0 14400 < th dose dependent rect. 19 5
444 23.46 wind 9.0 10 < th dose independent rect. 23 10
445 23.46 temperature 10.0 10 > th dose independent rect. 23 10
446 23.46 temperature 30.0 10 < th dose independent rect. 23 10
447 23.46 humidity 50.0 10 > th dose independent rect. 23 10
450 23.46 atmosphere 995.0 10 > th dose independent rect. 23 10
451 23.46 temperature 10.0 10 > th dose independent rect. 9 14
453 23.46 atmosphere 1015.0 10 < th dose independent rect. 9 14
454 23.46 precipitation 0.1 10 < th dose independent rect. 9 14
458 23.46 precipitation 0.1 10 < th dose dependent rect. 9 14
461 23.47 precipitation 0.1 720 < th dose independent rect. 24 5
463 23.47 temperature 10.0 90 > th dose independent rect. 3 10
468 23.47 atmosphere 995.0 90 > th dose independent rect. 3 10
470 23.47 atmosphere 1015.0 90 < th dose independent rect. 3 10
481 23.47 precipitation 0.1 720 < th dose dependent rect. 24 5
488 23.48 temperature 10.0 1440 > th dose independent rect. 24 10
491 23.48 atmosphere 995.0 1440 > th dose independent rect. 24 10
492 23.48 temperature 10.0 1440 > th dose independent rect. 10 14
497 23.48 radiation 10.0 90 < th dose dependent rect. 17 6
508 23.50 temperature 15.0 10 > th dose independent rect. 18 20
511 23.50 temperature 10.0 90 > th dose dependent rect. 18 11
518 23.51 precipitation 0.1 270 < th dose independent rect. 15 22
521 23.51 precipitation 0.1 270 < th dose dependent rect. 15 22
524 23.52 humidity 50.0 720 > th dose independent rect. 17 3
525 23.52 radiation 1.0 90 < th dose independent rect. 17 6
532 23.52 wind 9.0 720 < th dose independent rect. 1 19
537 23.52 radiation 1.0 1440 < th dose dependent rect. 19 5
555 23.53 temperature 10.0 90 > th dose independent rect. 17 21
556 23.53 atmosphere 995.0 90 > th dose independent rect. 17 21
567 23.54 atmosphere 995.0 270 > th dose independent rect. 12 4
571 23.54 atmosphere 995.0 720 > th dose independent rect. 17 19
572 23.54 atmosphere 995.0 90 > th dose dependent rect. 14 3
574 23.54 wind 9.0 10 < th dose dependent rect. 11 12
584 23.55 temperature 10.0 270 > th dose dependent rect. 18 2
593 23.56 temperature 30.0 30 < th dose independent rect. 18 5
612 23.58 temperature 20.0 720 > th dose independent rect. 5 1
614 23.58 temperature 30.0 30 < th dose independent rect. 14 3
616 23.58 radiation 40.0 30 < th dose independent rect. 14 3
632 23.60 wind 9.0 720 < th dose independent rect. 8 5
634 23.60 humidity 60.0 30 > th dose independent rect. 18 5
650 23.61 temperature 10.0 720 > th dose independent rect. 8 5
651 23.61 temperature 10.0 1440 > th dose independent rect. 19 5
654 23.61 temperature 30.0 1440 < th dose independent rect. 19 5
658 23.61 humidity 50.0 1440 > th dose independent rect. 19 5
660 23.61 atmosphere 995.0 720 > th dose independent rect. 8 5
661 23.61 atmosphere 995.0 1440 > th dose independent rect. 19 5
662 23.61 atmosphere 1015.0 720 < th dose independent rect. 8 5
663 23.61 radiation 1.0 1440 < th dose independent rect. 19 5
688 23.61 temperature 10.0 720 > th dose independent rect. 13 19
689 23.61 temperature 10.0 1440 > th dose independent rect. 24 19
724 23.64 precipitation 0.1 720 < th dose independent rect. 8 5
738 23.64 precipitation 0.1 720 < th dose dependent rect. 8 5
744 23.65 wind 1.0 10 > th dose independent rect. 14 4
748 23.65 atmosphere 995.0 720 > th dose independent rect. 5 10
749 23.65 wind 9.0 720 < th dose independent rect. 9 11
764 23.66 precipitation 0.1 90 < th dose independent rect. 17 21
765 23.66 temperature 10.0 720 > th dose dependent rect. 5 3
769 23.66 precipitation 0.1 90 < th dose dependent rect. 17 21
773 23.67 wind 9.0 10 < th dose independent rect. 14 4
777 23.67 temperature 10.0 10 > th dose independent rect. 14 4
782 23.67 atmosphere 1010.0 10 < th dose independent rect. 14 4
784 23.67 precipitation 0.1 10 < th dose independent rect. 14 4
794 23.67 wind 9.0 90 < th dose independent rect. 23 19
798 23.67 atmosphere 995.0 10 > th dose independent rect. 18 20
801 23.67 precipitation 0.1 10 < th dose dependent rect. 14 4
818 23.68 humidity 50.0 30 > th dose dependent rect. 18 5
823 23.69 precipitation 0.1 720 < th dose independent rect. 17 3
830 23.69 precipitation 0.1 720 < th dose dependent rect. 17 3
832 23.69 wind 1.0 10 > th dose dependent rect. 14 14
833 23.69 wind 9.0 30 < th dose dependent rect. 18 20
835 23.70 radiation 1.0 270 > th dose independent rect. 13 2
841 23.70 radiation 1.0 720 > th dose independent rect. 8 5
851 23.71 temperature 10.0 1440 > th dose independent rect. 15 4
871 23.71 atmosphere 995.0 270 > th dose independent rect. 8 13
898 23.72 precipitation 0.1 10 < th dose independent rect. 18 20
903 23.72 precipitation 0.1 10 < th dose dependent rect. 18 20
912 23.73 wind 9.0 10 < th dose independent rect. 18 20
914 23.73 humidity 50.0 90 > th dose independent rect. 17 20
921 23.74 humidity 90.0 10 < th dose independent rect. 14 4
944 23.75 atmosphere 995.0 90 > th dose independent rect. 18 5
952 23.75 temperature 10.0 90 > th dose independent rect. 23 19
980 23.77 radiation 1.0 30 > th dose independent rect. 14 5
988 23.77 temperature 10.0 720 > th dose independent rect. 9 11
989 23.77 atmosphere 1015.0 720 < th dose independent rect. 9 11
991 23.77 atmosphere 995.0 720 > th dose independent rect. 17 12
993 23.77 temperature 10.0 720 > th dose independent rect. 20 13
994 23.77 humidity 50.0 720 > th dose independent rect. 20 13
995 23.77 atmosphere 995.0 720 > th dose independent rect. 20 13