Os07g0410700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Ethylene-responsive element binding protein 1.
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Os07g0410700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Ethylene-responsive element binding protein 1.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 143.81 | 0.563 | 3 | 0.723 | 0.0801 | 1.9 | 0.282 | 2.81 | 0.322 | 19.2 | 20.36 | 4403 | -- | -- |
| 146.58 | 0.564 | 2.91 | 0.877 | 0.0893 | 0.949 | 0.276 | -- | 0.402 | 18.8 | 23.4 | 7375 | -- | -- |
| 144.01 | 0.559 | 3 | 0.709 | 0.0818 | 1.9 | -- | 2.83 | 0.326 | 19.3 | 20.49 | 4392 | -- | -- |
| 146.1 | 0.563 | 2.91 | 0.804 | 0.0928 | 0.887 | -- | -- | 0.387 | 19.1 | 24.2 | 5395 | -- | -- |
| 144.35 | 0.56 | 2.99 | 0.719 | -- | 1.88 | -- | 2.77 | 0.33 | -- | 20.51 | 4385 | -- | -- |
| 156.68 | 0.587 | 2.96 | 0.357 | 0.0974 | -- | 0.253 | -- | 0.173 | 18.9 | -- | -- | -- | -- |
| 156.85 | 0.586 | 2.96 | 0.353 | 0.098 | -- | -- | -- | 0.173 | 19 | -- | -- | -- | -- |
| 146.56 | 0.564 | 2.91 | 0.814 | -- | 0.902 | -- | -- | 0.395 | -- | 24.19 | 5469 | -- | -- |
| 153.72 | 0.581 | 2.95 | -- | 0.261 | 0.777 | -- | -- | 0.226 | 15.6 | 44.43 | 1580 | -- | -- |
| 157.35 | 0.586 | 2.96 | 0.351 | -- | -- | -- | -- | 0.171 | -- | -- | -- | -- | -- |
| 160.12 | 0.592 | 2.97 | -- | 0.0943 | -- | -- | -- | 0.134 | 19.2 | -- | -- | -- | -- |
| 154.69 | 0.579 | 2.95 | -- | -- | 0.544 | -- | -- | 0.214 | -- | 49.45 | 1491 | -- | -- |
| 160.59 | 0.592 | 2.97 | -- | -- | -- | -- | -- | 0.133 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 141.35 | temperature | 20 | 4320 | < th | dose dependent | rect. | 1 | 2 |
| 4 | 141.48 | radiation | 20 | 43200 | < th | dose dependent | rect. | 23 | 1 |
| 7 | 141.63 | temperature | 20 | 1440 | < th | dose independent | rect. | 5 | 1 |
| 19 | 141.93 | temperature | 20 | 1440 | > th | dose independent | rect. | 5 | 1 |
| 92 | 142.86 | temperature | 20 | 4320 | < th | dose dependent | sin | 9 | NA |
| 127 | 143.10 | temperature | 20 | 4320 | > th | dose independent | rect. | 22 | 1 |
| 150 | 143.19 | temperature | 10 | 4320 | > th | dose dependent | rect. | 2 | 1 |
| 170 | 143.26 | temperature | 20 | 4320 | < th | dose independent | rect. | 18 | 13 |
| 183 | 143.29 | temperature | 20 | 4320 | < th | dose independent | rect. | 13 | 18 |
| 191 | 143.31 | temperature | 20 | 1440 | > th | dose independent | rect. | 3 | 8 |
| 192 | 143.31 | temperature | 20 | 1440 | < th | dose independent | rect. | 3 | 8 |
| 212 | 143.33 | temperature | 20 | 4320 | < th | dose independent | rect. | 18 | 10 |
| 265 | 143.41 | temperature | 10 | 4320 | > th | dose dependent | rect. | 23 | 7 |
| 285 | 143.44 | temperature | 20 | 4320 | > th | dose independent | rect. | 18 | 13 |
| 296 | 143.45 | temperature | 15 | 30 | > th | dose dependent | rect. | 23 | 23 |
| 297 | 143.46 | temperature | 20 | 4320 | < th | dose independent | sin | 14 | NA |
| 299 | 143.46 | temperature | 20 | 4320 | < th | dose independent | rect. | 14 | 14 |
| 312 | 143.48 | temperature | 20 | 4320 | > th | dose independent | rect. | 13 | 18 |
| 332 | 143.50 | temperature | 10 | 4320 | > th | dose dependent | rect. | 5 | 1 |
| 343 | 143.51 | temperature | 20 | 4320 | < th | dose independent | rect. | 20 | 7 |
| 349 | 143.52 | temperature | 20 | 4320 | < th | dose independent | rect. | 21 | 5 |
| 387 | 143.55 | temperature | 20 | 4320 | > th | dose independent | rect. | 18 | 10 |
| 450 | 143.61 | temperature | 20 | 4320 | < th | dose independent | rect. | 22 | 1 |
| 472 | 143.63 | temperature | 20 | 4320 | > th | dose independent | rect. | 20 | 11 |
| 476 | 143.63 | temperature | 25 | 90 | < th | dose dependent | sin | 21 | NA |
| 524 | 143.68 | temperature | 20 | 4320 | > th | dose independent | sin | 13 | NA |
| 545 | 143.70 | temperature | 20 | 4320 | > th | dose independent | rect. | 13 | 15 |
| 565 | 143.72 | temperature | 20 | 4320 | < th | dose independent | rect. | 1 | 1 |
| 674 | 143.82 | wind | 3 | 43200 | > th | dose independent | rect. | 1 | 1 |
| 722 | 143.86 | temperature | 30 | 90 | < th | dose dependent | rect. | 3 | 23 |
| 824 | 143.95 | temperature | 20 | 4320 | < th | dose dependent | no | NA | NA |
| 832 | 143.96 | wind | 7 | 43200 | > th | dose independent | rect. | 6 | 3 |
| 885 | 143.99 | temperature | 15 | 270 | > th | dose dependent | rect. | 5 | 22 |
| 933 | 144.04 | temperature | 20 | 1440 | > th | dose independent | rect. | 3 | 16 |
| 994 | 144.10 | temperature | 20 | 4320 | > th | dose independent | rect. | 1 | 1 |