Os07g0282500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Aldehyde oxidase 3 (EC 1.2.3.1) (AtAO-3) (AtAO4).
FiT-DB / Search/ Help/ Sample detail
|
Os07g0282500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Similar to Aldehyde oxidase 3 (EC 1.2.3.1) (AtAO-3) (AtAO4).
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 392.34 | 0.931 | 6.57 | -7.22 | 1.23 | 2.83 | -0.292 | -5.23 | -0.374 | 1.32 | 21.84 | 1322 | -- | -- |
| 415.54 | 0.949 | 6.42 | -5.77 | 1.22 | 2.72 | -0.756 | -- | -0.036 | 1.52 | 18.87 | 1305 | -- | -- |
| 391.81 | 0.922 | 6.57 | -7.22 | 1.21 | 2.83 | -- | -5.6 | -0.338 | 1.35 | 22.58 | 1302 | -- | -- |
| 415.3 | 0.949 | 6.39 | -5.76 | 1.24 | 2.5 | -- | -- | 0.0121 | 0.828 | 20.9 | 1318 | -- | -- |
| 459.88 | 0.999 | 6.57 | -7.4 | -- | 3.39 | -- | -6.29 | -0.412 | -- | 22.58 | 1152 | -- | -- |
| 610.53 | 1.16 | 6.26 | -4.81 | 1.54 | -- | -0.304 | -- | 0.612 | 1.46 | -- | -- | -- | -- |
| 610.89 | 1.16 | 6.26 | -4.8 | 1.55 | -- | -- | -- | 0.613 | 1.48 | -- | -- | -- | -- |
| 485.23 | 1.03 | 6.38 | -5.71 | -- | 2.95 | -- | -- | 0.00821 | -- | 21.15 | 1131 | -- | -- |
| 1177.45 | 1.6 | 6.18 | -- | 1.29 | 1.07 | -- | -- | 0.956 | 1.51 | 22.81 | 1257 | -- | -- |
| 757.43 | 1.29 | 6.24 | -4.74 | -- | -- | -- | -- | 0.646 | -- | -- | -- | -- | -- |
| 1218.2 | 1.63 | 6.14 | -- | 1.46 | -- | -- | -- | 1.15 | 1.37 | -- | -- | -- | -- |
| 1264.82 | 1.66 | 6.16 | -- | -- | 1.53 | -- | -- | 1.02 | -- | 24.49 | 1144 | -- | -- |
| 1349.77 | 1.71 | 6.12 | -- | -- | -- | -- | -- | 1.17 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 375.59 | wind | 5 | 43200 | > th | dose dependent | rect. | 5 | 12 |
| 8 | 377.67 | wind | 5 | 43200 | > th | dose independent | rect. | 5 | 12 |
| 13 | 378.07 | wind | 5 | 43200 | < th | dose independent | rect. | 5 | 12 |
| 18 | 378.58 | wind | 5 | 43200 | > th | dose dependent | rect. | 24 | 17 |
| 23 | 378.83 | wind | 5 | 43200 | > th | dose independent | rect. | 9 | 7 |
| 24 | 378.85 | wind | 5 | 43200 | > th | dose dependent | sin | 1 | NA |
| 29 | 379.28 | wind | 5 | 43200 | < th | dose independent | rect. | 8 | 8 |
| 34 | 379.66 | wind | 5 | 43200 | > th | dose dependent | rect. | 5 | 16 |
| 47 | 380.26 | wind | 5 | 43200 | > th | dose dependent | rect. | 2 | 19 |
| 50 | 380.32 | wind | 5 | 43200 | > th | dose dependent | rect. | 24 | 21 |
| 61 | 380.62 | wind | 5 | 43200 | > th | dose dependent | rect. | 5 | 20 |
| 88 | 381.41 | wind | 5 | 43200 | < th | dose independent | rect. | 23 | 18 |
| 106 | 381.84 | wind | 5 | 43200 | > th | dose independent | sin | 0 | NA |
| 115 | 382.11 | wind | 5 | 43200 | > th | dose dependent | rect. | 18 | 23 |
| 129 | 382.37 | wind | 5 | 43200 | < th | dose independent | sin | 1 | NA |
| 188 | 383.46 | wind | 5 | 43200 | > th | dose dependent | rect. | 13 | 23 |
| 196 | 383.60 | wind | 5 | 43200 | > th | dose independent | rect. | 5 | 20 |
| 200 | 383.70 | wind | 5 | 43200 | > th | dose dependent | rect. | 10 | 23 |
| 202 | 383.71 | wind | 5 | 43200 | > th | dose dependent | no | NA | NA |
| 205 | 383.75 | wind | 5 | 43200 | > th | dose independent | rect. | 10 | 22 |
| 218 | 384.02 | wind | 5 | 43200 | > th | dose independent | rect. | 24 | 21 |
| 234 | 384.25 | wind | 5 | 43200 | > th | dose independent | rect. | 2 | 19 |
| 237 | 384.33 | wind | 5 | 43200 | < th | dose independent | rect. | 19 | 22 |
| 265 | 384.56 | wind | 5 | 43200 | < th | dose independent | rect. | 5 | 20 |
| 281 | 384.70 | wind | 5 | 43200 | < th | dose independent | rect. | 9 | 22 |
| 296 | 384.84 | wind | 5 | 43200 | < th | dose independent | rect. | 23 | 22 |
| 302 | 384.86 | wind | 9 | 43200 | < th | dose independent | rect. | 18 | 21 |
| 358 | 385.34 | wind | 5 | 43200 | > th | dose independent | rect. | 18 | 23 |
| 378 | 385.46 | wind | 5 | 43200 | < th | dose independent | rect. | 2 | 19 |
| 501 | 386.46 | wind | 5 | 43200 | > th | dose independent | no | NA | NA |
| 513 | 386.57 | wind | 5 | 43200 | < th | dose independent | no | NA | NA |
| 569 | 387.25 | wind | 9 | 43200 | > th | dose independent | rect. | 17 | 22 |
| 589 | 387.47 | wind | 5 | 43200 | > th | dose independent | rect. | 13 | 23 |
| 634 | 387.95 | wind | 5 | 43200 | < th | dose independent | rect. | 13 | 23 |
| 760 | 390.06 | temperature | 25 | 1440 | > th | dose dependent | rect. | 16 | 1 |
| 805 | 390.80 | wind | 9 | 43200 | < th | dose independent | rect. | 5 | 16 |
| 839 | 391.26 | temperature | 25 | 1440 | > th | dose dependent | rect. | 16 | 3 |
| 845 | 391.33 | temperature | 20 | 1440 | > th | dose dependent | rect. | 16 | 5 |
| 866 | 391.57 | temperature | 20 | 1440 | > th | dose dependent | rect. | 18 | 1 |
| 887 | 391.77 | radiation | 1 | 1440 | < th | dose dependent | rect. | 18 | 10 |
| 902 | 391.88 | wind | 9 | 43200 | < th | dose independent | rect. | 13 | 20 |
| 950 | 392.39 | temperature | 25 | 1440 | > th | dose dependent | rect. | 15 | 17 |
| 974 | 392.66 | wind | 9 | 43200 | > th | dose independent | rect. | 13 | 20 |
| 997 | 392.98 | wind | 9 | 43200 | > th | dose independent | rect. | 7 | 14 |